RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 DEFB119Q8N690 84 aa10.76□□□□□ -0.69
CCNA1-201ENST00000255465 TMEM104Q8NE00 496 aa10.76□□□□□ -0.69
CCNA1-201ENST00000255465 OR6K2Q8NGY2 324 aa10.76□□□□□ -0.69
CCNA1-201ENST00000255465 OR6N1Q8NGY5 312 aa10.76□□□□□ -0.69
CCNA1-201ENST00000255465 EXTL1Q92935 676 aa10.76□□□□□ -0.69
CCNA1-201ENST00000255465 WDR92Q96MX6 357 aa10.76□□□□□ -0.69
CCNA1-201ENST00000255465 AMDHD1Q96NU7 426 aa10.76□□□□□ -0.69
CCNA1-201ENST00000255465 INTS14Q96SY0 518 aa10.76□□□□□ -0.69
CCNA1-201ENST00000255465 GPR174Q9BXC1 333 aa10.76□□□□□ -0.69
CCNA1-201ENST00000255465 BHLHE41Q9C0J9 482 aaPredicted RBP10.76□□□□□ -0.69
CCNA1-201ENST00000255465 MEPEQ9NQ76 525 aaPredicted RBP10.76□□□□□ -0.69
CCNA1-201ENST00000255465 UPB1Q9UBR1 384 aa10.76□□□□□ -0.69
CCNA1-201ENST00000255465 PITPNC1Q9UKF7 332 aa10.76□□□□□ -0.69
CCNA1-201ENST00000255465 RPH3ALQ9UNE2 315 aa10.76□□□□□ -0.69
CCNA1-201ENST00000255465 LHX6Q9UPM6 363 aa10.76□□□□□ -0.69
CCNA1-201ENST00000255465 EXOGQ9Y2C4 368 aaKnown RBP10.76□□□□□ -0.69
CCNA1-201ENST00000255465 A0A087WWC5 75 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 TEX13DA0A0J9YY54 714 aaPredicted RBP10.75□□□□□ -0.69
CCNA1-201ENST00000255465 CD8B2A6NJW9 211 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 AHRRA9YTQ3 701 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 PLXNA2O75051 1894 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 LEFTY1O75610 366 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 CD8BP10966 210 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 CD46P15529 392 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 MAOAP21397 527 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 DTYMKP23919 212 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 TEAD1P28347 426 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 AKT2P31751 481 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 CEBPGP53567 150 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 CRYBA2P53672 197 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 TAS2R43P59537 309 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 RPS20P60866 119 aaKnown RBP10.75□□□□□ -0.69
CCNA1-201ENST00000255465 ARF6P62330 175 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 VAMP2P63027 116 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 INSM1Q01101 510 aaPredicted RBP10.75□□□□□ -0.69
CCNA1-201ENST00000255465 SLC10A7Q0GE19 358 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 DUSP8Q13202 625 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 TRA2AQ13595 282 aaKnown RBP eCLIP10.75□□□□□ -0.69
CCNA1-201ENST00000255465 LRRK1Q38SD2 2015 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 DCAF12L2Q5VW00 463 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 OR2A2Q6IF42 318 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 DHRS11Q6UWP2 260 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 DNM1P46Q6ZS02 220 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 PXKQ7Z7A4 578 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 KRTCAP2Q8N6L1 136 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 BOLLQ8N9W6 283 aaKnown RBP10.75□□□□□ -0.69
CCNA1-201ENST00000255465 RNASE8Q8TDE3 154 aaKnown RBP10.75□□□□□ -0.69
CCNA1-201ENST00000255465 PHYHIPQ92561 330 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 LOXL4Q96JB6 756 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 FSD1LQ9BXM9 530 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 SMDT1Q9H4I9 107 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 ZDHHC6Q9H6R6 413 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 MSL2Q9HCI7 577 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 PARP11Q9NR21 331 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 FAM212BQ9NTI7 297 aaPredicted RBP10.75□□□□□ -0.69
CCNA1-201ENST00000255465 ADAMTS9Q9P2N4 1935 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 DNAJB11Q9UBS4 358 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 OR52A1Q9UKL2 312 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 HDGFL3Q9Y3E1 203 aa10.75□□□□□ -0.69
CCNA1-201ENST00000255465 ZFHX2Q9C0A1 2572 aaPredicted RBP10.74□□□□□ -0.69
CCNA1-201ENST00000255465 GPR89AB7ZAQ6 455 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 PCDH7O60245 1069 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 FMO6PO60774 539 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 STK16O75716 305 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 PCDH8O95206 1070 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 IGSF6O95976 241 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 F13BP05160 661 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 SNRNP70P08621 437 aaKnown RBP10.74□□□□□ -0.69
CCNA1-201ENST00000255465 GPR89BP0CG08 455 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 PTGER3P43115 390 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 RPS10P46783 165 aaKnown RBP10.74□□□□□ -0.69
CCNA1-201ENST00000255465 TAS2R19P59542 299 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 SYPL1Q16563 259 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 ATP6V1FQ16864 119 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 CRB2Q5IJ48 1285 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 OR5D16Q8NGK9 328 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 OR5M8Q8NGP6 311 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 KCNE4Q8WWG9 221 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 FAM131CQ96AQ9 280 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 ARRDC3Q96B67 414 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 ZNF514Q96K75 400 aaPredicted RBP10.74□□□□□ -0.69
CCNA1-201ENST00000255465 CDK15Q96Q40 435 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 MICU1Q9BPX6 476 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 PARD6GQ9BYG4 376 aaPredicted RBP10.74□□□□□ -0.69
CCNA1-201ENST00000255465 SLC25A31Q9H0C2 315 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 PLEKHA2Q9HB19 425 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 SGK2Q9HBY8 427 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 NCDNQ9UBB6 729 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 ASF1AQ9Y294 204 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 EP300Q09472 2414 aaPredicted RBP10.74□□□□□ -0.69
CCNA1-201ENST00000255465 SYNDIG1LA6NDD5 238 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 TCF21O43680 179 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 PLPP2O43688 288 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 TLX2O43763 284 aaPredicted RBP10.74□□□□□ -0.69
CCNA1-201ENST00000255465 GFRA3O60609 400 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 SEMA4FO95754 770 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 SOD3P08294 240 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 C1SP09871 688 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 RAB40ALP0C0E4 278 aa10.74□□□□□ -0.69
CCNA1-201ENST00000255465 ITPKBP27987 946 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms