RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 CNIH2Q6PI25 160 aa16.83■□□□□ 0.28
TRIM47-201ENST00000254816 OR13C5Q8NGS8 318 aa16.83■□□□□ 0.28
TRIM47-201ENST00000254816 PGLYRP3Q96LB9 341 aa16.83■□□□□ 0.28
TRIM47-201ENST00000254816 MRPL13Q9BYD1 178 aaKnown RBP16.83■□□□□ 0.28
TRIM47-201ENST00000254816 MRM2Q9UI43 246 aaKnown RBP16.83■□□□□ 0.28
TRIM47-201ENST00000254816 CSAG2Q9Y5P2 127 aa16.83■□□□□ 0.28
TRIM47-201ENST00000254816 GJE1A6NN92 205 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 ALOX5APP20292 161 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 MEOX1P50221 254 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 GFRA1P56159 465 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 CLDN17P56750 224 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 CLRN1P58418 232 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 SIRPAP78324 504 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 ARG2P78540 354 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 GLO1Q04760 184 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 MFAP5Q13361 173 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 FDCSPQ8NFU4 85 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 MRPS18CQ9Y3D5 142 aaKnown RBP16.82■□□□□ 0.28
TRIM47-201ENST00000254816 NME2P1O60361 137 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 RGS9O75916 674 aaPredicted RBP16.82■□□□□ 0.28
TRIM47-201ENST00000254816 PGA4P0DJD7 388 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 PGA3P0DJD8 388 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 POU3F2P20265 443 aaPredicted RBP16.82■□□□□ 0.28
TRIM47-201ENST00000254816 NME2P22392 152 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 EDNRAP25101 427 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 CLDN15P56746 228 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 SOX8P57073 446 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 PPP3R1P63098 170 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 PLGLB1Q02325 96 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 HBMQ6B0K9 141 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 NR2C2APQ86WQ0 139 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 YIPF7Q8N8F6 280 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 OTOSQ8NHW6 89 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 HSD17B8Q92506 261 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 GHSRQ92847 366 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 C11orf54Q9H0W9 315 aaPredicted RBP16.82■□□□□ 0.28
TRIM47-201ENST00000254816 IKZF2Q9UKS7 526 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 RASD1Q9Y272 281 aa16.82■□□□□ 0.28
TRIM47-201ENST00000254816 A0A087WV48 116 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 EIF1BO60739 113 aaKnown RBP16.81■□□□□ 0.28
TRIM47-201ENST00000254816 SPINK2P20155 84 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 NR4A2P43354 598 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 CDK5R1Q15078 307 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 P2RY14Q15391 338 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 DEFB109BQ30KR1 87 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 FAM27D1Q5T7N8 215 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 DNM1P34Q6PK57 102 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 NCCRP1Q6ZVX7 275 aaPredicted RBP16.81■□□□□ 0.28
TRIM47-201ENST00000254816 TMEM251Q8N6I4 163 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 GDPD1Q8N9F7 314 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 NOXO1Q8NFA2 376 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 RNF166Q96A37 237 aaPredicted RBP16.81■□□□□ 0.28
TRIM47-201ENST00000254816 ZNF775Q96BV0 537 aaPredicted RBP16.81■□□□□ 0.28
TRIM47-201ENST00000254816 MRPL48Q96GC5 212 aaKnown RBP16.81■□□□□ 0.28
TRIM47-201ENST00000254816 SLC25A44Q96H78 314 aaPredicted RBP16.81■□□□□ 0.28
TRIM47-201ENST00000254816 FAM210AQ96ND0 272 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 ZNF385AQ96PM9 386 aaKnown RBP16.81■□□□□ 0.28
TRIM47-201ENST00000254816 COQ7Q99807 217 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 NAA11Q9BSU3 229 aaPredicted RBP16.81■□□□□ 0.28
TRIM47-201ENST00000254816 PPIL3Q9H2H8 161 aaKnown RBP16.81■□□□□ 0.28
TRIM47-201ENST00000254816 B4GALT7Q9UBV7 327 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 KLK13Q9UKR3 277 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 RBMX2Q9Y388 322 aaKnown RBP16.81■□□□□ 0.28
TRIM47-201ENST00000254816 ZNF407Q9C0G0 2248 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 FRYQ5TBA9 3013 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 TRBV2A0A0J9YWF9 115 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 SMAD9O15198 467 aaKnown RBP16.81■□□□□ 0.28
TRIM47-201ENST00000254816 OGG1O15527 345 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 CXCL13O43927 109 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 CCNKO75909 580 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 IGHG1P01857 330 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 PTGS2P35354 604 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 EIF1AXP47813 144 aaKnown RBP16.81■□□□□ 0.28
TRIM47-201ENST00000254816 GDI2P50395 445 aaKnown RBP16.81■□□□□ 0.28
TRIM47-201ENST00000254816 CARD18P57730 90 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 NANOS3P60323 173 aaKnown RBP16.81■□□□□ 0.28
TRIM47-201ENST00000254816 RSPO4Q2I0M5 234 aaPredicted RBP16.81■□□□□ 0.28
TRIM47-201ENST00000254816 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.81■□□□□ 0.28
TRIM47-201ENST00000254816 OR6X1Q8NH79 312 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 RBP7Q96R05 134 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 PDCD1LG2Q9BQ51 273 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 SLCO1C1Q9NYB5 712 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 POLHQ9Y253 713 aa16.81■□□□□ 0.28
TRIM47-201ENST00000254816 TNRC6AQ8NDV7 1962 aaKnown RBP16.8■□□□□ 0.28
TRIM47-201ENST00000254816 ZNF726A6NNF4 738 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 KHDRBS3O75525 346 aaKnown RBP16.8■□□□□ 0.28
TRIM47-201ENST00000254816 WNT11O96014 354 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 CD46P15529 392 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 ASAH1Q13510 395 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 LIPNQ5VXI9 398 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 CREB3L2Q70SY1 520 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 SLC26A10Q8NG04 563 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 ABHD4Q8TB40 342 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 ROBO4Q8WZ75 1007 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 SMIM19Q96E16 107 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 ADGRG7Q96K78 797 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 SLC6A15Q9H2J7 730 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 KLF13Q9Y2Y9 288 aaPredicted RBP16.8■□□□□ 0.28
TRIM47-201ENST00000254816 LAMA5O15230 3695 aa16.8■□□□□ 0.28
TRIM47-201ENST00000254816 A0A1B0GTH9 108 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms