RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CARD17Q5XLA6 110 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 LINC00114Q6XXX2 140 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 AMIGO2Q86SJ2 522 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 RNF113BQ8IZP6 322 aaKnown RBP11.83□□□□□ -0.52
DDX39A-201ENST00000242776 GPR137CQ8N3F9 429 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 BPIFB2Q8N4F0 458 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 OR5K1Q8NHB7 308 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 SLC7A13Q8TCU3 470 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 TMEM255BQ8WV15 326 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 RDH5Q92781 318 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 MRPL24Q96A35 216 aaKnown RBP11.83□□□□□ -0.52
DDX39A-201ENST00000242776 PKP2Q99959 881 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 PRSS27Q9BQR3 290 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 ZNF426Q9BUY5 554 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 GPR35Q9HC97 309 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 MED31Q9Y3C7 131 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 NOX1Q9Y5S8 564 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 U3KQV3 271 aa11.83□□□□□ -0.52
DDX39A-201ENST00000242776 TRBV4-1A0A0J9YWV2 114 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 MGRN1O60291 552 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 NCR1O76036 304 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 MPZL1O95297 269 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 AHSA1O95433 338 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 BCL10O95999 233 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 TFP02787 698 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 ANPEPP15144 967 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 ACHEP22303 614 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 CBLP22681 906 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 NR4A1P22736 598 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 ARR3P36575 388 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 LIMS1P48059 325 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 UGT2B15P54855 530 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 LMO4P61968 165 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 MIDNQ504T8 468 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 PRR31Q5SQ13 230 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 C1orf140Q5VVS0 124 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 WDR88Q6ZMY6 472 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 MBOAT2Q6ZWT7 520 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 ZDHHC22Q8N966 263 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 OR4C15Q8NGM1 316 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 NRBF2Q96F24 287 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 SUCNR1Q9BXA5 334 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 SEMA6AQ9H2E6 1030 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 RNPEPL1Q9HAU8 725 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 STX18Q9P2W9 335 aaKnown RBP11.82□□□□□ -0.52
DDX39A-201ENST00000242776 DUSP13Q9UII6 198 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 RASD1Q9Y272 281 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 TMEM5Q9Y2B1 443 aa11.82□□□□□ -0.52
DDX39A-201ENST00000242776 TRRAPQ9Y4A5 3859 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 TRAV36DV7A0A075B6V5 113 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 A0A087WUU8 490 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 TRAV20A0A0B4J274 112 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 A0A1W2PPW3 197 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 ARRDC5A6NEK1 342 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 M0R3G1 203 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 KPNA4O00629 521 aaPredicted RBP11.81□□□□□ -0.52
DDX39A-201ENST00000242776 OR2T1O43869 369 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 OR10H3O60404 316 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 SLC43A1O75387 559 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 IGF2P01344 180 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 ZNF43P17038 809 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 PAX7P23759 505 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 GTF2E2P29084 291 aaKnown RBP11.81□□□□□ -0.52
DDX39A-201ENST00000242776 MAGEB1P43366 347 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 RPS5P46782 204 aaKnown RBP11.81□□□□□ -0.52
DDX39A-201ENST00000242776 SH3BGRP55822 239 aaPredicted RBP11.81□□□□□ -0.52
DDX39A-201ENST00000242776 MYBPC1Q00872 1141 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 C1DQ13901 141 aaKnown RBP11.81□□□□□ -0.52
DDX39A-201ENST00000242776 MICAQ29983 383 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 PHYHD1Q5SRE7 291 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 USP43Q70EL4 1123 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 ZDHHC13Q8IUH4 622 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 FAM169BQ8N8A8 192 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 ICA1LQ8NDH6 482 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 OR4K5Q8NGD3 323 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 GIPC3Q8TF64 312 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 TAF15Q92804 592 aaKnown RBP eCLIP11.81□□□□□ -0.52
DDX39A-201ENST00000242776 ZNF747Q9BV97 191 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 TMPRSS13Q9BYE2 586 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 LINC00470Q9BZP3 86 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 RACGAP1Q9H0H5 632 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 VNN3Q9NY84 501 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 KIF17Q9P2E2 1029 aa11.81□□□□□ -0.52
DDX39A-201ENST00000242776 G3V2T6 193 aa11.8□□□□□ -0.52
DDX39A-201ENST00000242776 PLPP2O43688 288 aa11.8□□□□□ -0.52
DDX39A-201ENST00000242776 VAMP5O95183 116 aa11.8□□□□□ -0.52
DDX39A-201ENST00000242776 UBA52P62987 128 aaKnown RBP11.8□□□□□ -0.52
DDX39A-201ENST00000242776 PPP1R8Q12972 351 aaKnown RBP11.8□□□□□ -0.52
DDX39A-201ENST00000242776 MFSD13AQ14CX5 517 aa11.8□□□□□ -0.52
DDX39A-201ENST00000242776 FAM69AQ5T7M9 428 aa11.8□□□□□ -0.52
DDX39A-201ENST00000242776 NRMQ8IXM6 262 aa11.8□□□□□ -0.52
DDX39A-201ENST00000242776 OR10G2Q8NGC3 310 aa11.8□□□□□ -0.52
DDX39A-201ENST00000242776 OR6S1Q8NH40 331 aa11.8□□□□□ -0.52
DDX39A-201ENST00000242776 PFN4Q8NHR9 129 aa11.8□□□□□ -0.52
DDX39A-201ENST00000242776 FUZQ9BT04 418 aa11.8□□□□□ -0.52
DDX39A-201ENST00000242776 OR51B6Q9H340 312 aa11.8□□□□□ -0.52
DDX39A-201ENST00000242776 MS4A5Q9H3V2 200 aa11.8□□□□□ -0.52
DDX39A-201ENST00000242776 ZNF665Q9H7R5 613 aa11.8□□□□□ -0.52
DDX39A-201ENST00000242776 NTN4Q9HB63 628 aa11.8□□□□□ -0.52
DDX39A-201ENST00000242776 G6PC2Q9NQR9 355 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms