RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 ELP5Q8TE02 316 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 PELOQ9BRX2 385 aaKnown RBP7.75□□□□□ -1.17
VPS4B-201ENST00000238497 SLC22A4Q9H015 551 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 ALKBH4Q9NXW9 302 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 KCNG2Q9UJ96 466 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 EXOGQ9Y2C4 368 aaKnown RBP7.75□□□□□ -1.17
VPS4B-201ENST00000238497 SMLR1H3BR10 107 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 ZNF593O00488 134 aaPredicted RBP7.75□□□□□ -1.17
VPS4B-201ENST00000238497 SMAD9O15198 467 aaKnown RBP7.75□□□□□ -1.17
VPS4B-201ENST00000238497 SP1P08047 785 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 PNMTP11086 282 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 EDN3P14138 238 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 MST1P26927 711 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 EVI2BP34910 448 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 RCVRNP35243 200 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 PPP3R1P63098 170 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 ADAM8P78325 824 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 POU3F1Q03052 451 aaPredicted RBP7.75□□□□□ -1.17
VPS4B-201ENST00000238497 SKP2Q13309 424 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 ACKR1Q16570 336 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 CEP78Q5JTW2 689 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 SFRP4Q6FHJ7 346 aaPredicted RBP7.75□□□□□ -1.17
VPS4B-201ENST00000238497 KRT77Q7Z794 578 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 LSMEM1Q8N8F7 131 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 ST6GALNAC3Q8NDV1 305 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 OR10AC1Q8NH08 325 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 TP63Q9H3D4 680 aaPredicted RBP7.75□□□□□ -1.17
VPS4B-201ENST00000238497 EXO5Q9H790 373 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 POLE3Q9NRF9 147 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 CHRNA9Q9UGM1 479 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 ADAM30Q9UKF2 790 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 KLHDC2Q9Y2U9 406 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 IGKV3D-11A0A0A0MRZ8 115 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 MEIOCA2RUB1 952 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 RNF224P0DH78 156 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 PER3P56645 1201 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 MLF1P58340 268 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 HSF1Q00613 529 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 SELENBP1Q13228 472 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 FCRLAQ7L513 359 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 SLC7A5P1Q8MH63 180 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 POMGNT2Q8NAT1 580 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 OR14A16Q8NHC5 309 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 FYTTD1Q96QD9 318 aaKnown RBP7.75□□□□□ -1.17
VPS4B-201ENST00000238497 HOXD1Q9GZZ0 328 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 PPP4R1LQ9P1A2 415 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 SLC22A13Q9Y226 551 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 FAM166BA8MTA8 275 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 CCL21O00585 134 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 LANCL1O43813 399 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 PTTG1O95997 202 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 IGHA1P01876 353 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 OR2T7P0C7T2 308 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 NAT1P18440 290 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 DIO1P49895 249 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 SLC25A30Q5SVS4 291 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 XKRXQ6PP77 449 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.74□□□□□ -1.17
VPS4B-201ENST00000238497 APCDD1LQ8NCL9 501 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 OR10G3Q8NGC4 313 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 OR51A4Q8NGJ6 313 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 OR2T27Q8NH04 317 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 OR5B2Q96R09 309 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 ELOVL3Q9HB03 270 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 PPIEQ9UNP9 301 aaKnown RBP7.74□□□□□ -1.17
VPS4B-201ENST00000238497 A0A1W2PQ72 361 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 ANXA2P2A6NMY6 339 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 FZD7O75084 574 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 WISP2O76076 250 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 ZFPL1O95159 310 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 TPOP07202 933 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 ANXA2P07355 339 aaKnown RBP7.74□□□□□ -1.17
VPS4B-201ENST00000238497 RBM34P42696 430 aaKnown RBP7.74□□□□□ -1.17
VPS4B-201ENST00000238497 MAP2K3P46734 347 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 MEOX1P50221 254 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 PRKXP51817 358 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 CAMK2DQ13557 499 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 CBFBQ13951 182 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 KCNJ8Q15842 424 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 TMEM225Q6GV28 225 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 FAAP20Q6NZ36 180 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 MAMDC2Q7Z304 686 aaPredicted RBP7.74□□□□□ -1.17
VPS4B-201ENST00000238497 ATG4DQ86TL0 474 aaPredicted RBP7.74□□□□□ -1.17
VPS4B-201ENST00000238497 NFAM1Q8NET5 270 aaPredicted RBP7.74□□□□□ -1.17
VPS4B-201ENST00000238497 OR7G1Q8NGA0 311 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 OR5L2Q8NGL0 311 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 OR2T4Q8NH00 348 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 SLC35B4Q969S0 331 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 ADIPOR1Q96A54 375 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 FRMD6Q96NE9 622 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 TSPAN32Q96QS1 320 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 DEFB127Q9H1M4 99 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 KCNK15Q9H427 330 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 ZMAT3Q9HA38 289 aaKnown RBP7.74□□□□□ -1.17
VPS4B-201ENST00000238497 SIAEQ9HAT2 523 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 RANGRFQ9HD47 186 aaPredicted RBP7.74□□□□□ -1.17
VPS4B-201ENST00000238497 INIPQ9NRY2 104 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 ZNF221Q9UK13 617 aa7.74□□□□□ -1.17
VPS4B-201ENST00000238497 COA3Q9Y2R0 106 aaPredicted RBP7.74□□□□□ -1.17
VPS4B-201ENST00000238497 IQCMA0A1B0GVH7 501 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms