RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 IL32P24001 234 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 STARP49675 285 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 SKP2Q13309 424 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 SLC22A6Q4U2R8 563 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 TMEM184AQ6ZMB5 413 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 ZNF615Q8N8J6 731 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 CMBLQ96DG6 245 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 MMABQ96EY8 250 aaPredicted RBP12.65□□□□□ -0.38
USH1C-201ENST00000005226 TWSG1Q9GZX9 223 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 NXF5Q9H1B4 397 aaKnown RBP12.65□□□□□ -0.38
USH1C-201ENST00000005226 TMEM235A6NFC5 223 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 SLC17A2O00624 439 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 SLC16A7O60669 478 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 EIF2B5Q13144 721 aaKnown RBP12.65□□□□□ -0.38
USH1C-201ENST00000005226 SLC17A1Q14916 467 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 RHOUQ7L0Q8 258 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 TAF8Q7Z7C8 310 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 RTN4RL2Q86UN3 420 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 OTOSQ8NHW6 89 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 NPAS1Q99742 590 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 SLC6A7Q99884 636 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 PDCD10Q9BUL8 212 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 SFXN1Q9H9B4 322 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 PNO1Q9NRX1 252 aaKnown RBP12.65□□□□□ -0.38
USH1C-201ENST00000005226 MSRAQ9UJ68 235 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 PLEKHA6Q9Y2H5 1048 aa12.65□□□□□ -0.38
USH1C-201ENST00000005226 NOP16Q9Y3C1 178 aaKnown RBP12.65□□□□□ -0.38
USH1C-201ENST00000005226 LINC01565O15544 149 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 EIF4E2O60573 245 aaKnown RBP12.64□□□□□ -0.39
USH1C-201ENST00000005226 AQP8O94778 261 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 HNRNPA2B1P22626 353 aaKnown RBP12.64□□□□□ -0.39
USH1C-201ENST00000005226 ATP1B3P54709 279 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 PSMD4P55036 377 aaKnown RBP12.64□□□□□ -0.39
USH1C-201ENST00000005226 DHRS2Q13268 280 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 TMEM225Q6GV28 225 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 OOSP2Q86WS3 158 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 SLC22A18ASQ8N1D0 253 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 ARHGEF39Q8N4T4 335 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 ACBD4Q8NC06 268 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 TMEM185AQ8NFB2 350 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 CYYR1Q96J86 154 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 VRK1Q99986 396 aaPredicted RBP12.64□□□□□ -0.39
USH1C-201ENST00000005226 ADAT1Q9BUB4 502 aaKnown RBP12.64□□□□□ -0.39
USH1C-201ENST00000005226 ZNF471Q9BX82 626 aaPredicted RBP12.64□□□□□ -0.39
USH1C-201ENST00000005226 SLC19A3Q9BZV2 496 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 OBP2AQ9NY56 170 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 FREM3P0C091 2139 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 ZNF264O43296 627 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 OR6A2O95222 327 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 UTS2O95399 124 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 NUDT14O95848 222 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 CLPSP04118 112 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 PNMTP11086 282 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 EGR3Q06889 387 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 RASGEF1BQ0VAM2 473 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 JMJD6Q6NYC1 403 aaPredicted RBP12.64□□□□□ -0.39
USH1C-201ENST00000005226 CORO6Q6QEF8 472 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 BPIFB2Q8N4F0 458 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 JAGN1Q8N5M9 183 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 MRGPRX1Q96LB2 322 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 OR8B4Q96RC9 309 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 SAV1Q9H4B6 383 aaPredicted RBP12.64□□□□□ -0.39
USH1C-201ENST00000005226 MRPL22Q9NWU5 206 aaKnown RBP12.64□□□□□ -0.39
USH1C-201ENST00000005226 RASL12Q9NYN1 266 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 EPHA6Q9UF33 1036 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 DHDHQ9UQ10 334 aa12.64□□□□□ -0.39
USH1C-201ENST00000005226 LOC101059948A0A1B0GTJ6 334 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 C17orf105B2RV13 164 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 SCDO00767 359 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 ZNF735P0CB33 412 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 APEHP13798 732 aaKnown RBP12.63□□□□□ -0.39
USH1C-201ENST00000005226 AVPR2P30518 371 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 UBE2IP63279 158 aaKnown RBP12.63□□□□□ -0.39
USH1C-201ENST00000005226 MC2RQ01718 297 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 FNDC7Q5VTL7 733 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 C3orf33Q6P1S2 294 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 UNQ6126/PRO20091Q6UXV3 157 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 GVQW1Q8N7I0 195 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 OR13C8Q8NGS7 320 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 FAM131CQ96AQ9 280 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 GAL3ST4Q96RP7 486 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 OR8D2Q9GZM6 311 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 BARX1Q9HBU1 254 aaPredicted RBP12.63□□□□□ -0.39
USH1C-201ENST00000005226 UBQLN4Q9NRR5 601 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 KLK13Q9UKR3 277 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 LHX6Q9UPM6 363 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 PLCL2Q9UPR0 1127 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 B4DGG1 531 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 C5orf67F2Z3F1 127 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 SOX1O00570 391 aaPredicted RBP12.63□□□□□ -0.39
USH1C-201ENST00000005226 HCRTR2O43614 444 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 ZNF432O94892 652 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 PMS2P2O95744 297 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 TXNDC12O95881 172 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 GLULP15104 373 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 CD34P28906 385 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 TAS2R19P59542 299 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 FUT7Q11130 342 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 MPPED2Q15777 294 aa12.63□□□□□ -0.39
USH1C-201ENST00000005226 MANEAQ5SRI9 462 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms