RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Cdhr1Q8VHP6 859 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Hemk1Q921L7 340 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Moap1Q9ERH6 352 aa17.06■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn2r108E9PYS0 855 aa17.05■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 DgkaO88673 730 aa17.05■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Fcgr1P26151 404 aa17.05■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Ankub1Q3UUE9 192 aa17.05■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Mettl7a2Q5I0W6 244 aa17.05■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Epha1Q60750 977 aa17.05■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Doc2aQ7TNF0 405 aa17.05■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Gm13199Q8C8E0 125 aa17.05■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Zfand2bQ91X58 257 aa17.05■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Kcne3Q9WTW2 103 aa17.05■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Ilf3Q9Z1X4 898 aaKnown RBP17.05■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Oasl2Q9Z2F2 508 aa17.05■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 4930402F06RikA2AUQ8 332 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Gm5519D3Z175 170 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Ighg2cF6TQW2 404 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn1r115K7N6Y3 295 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Hdac3O88895 424 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Nfkbil1O88995 381 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 P01864 335 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Ighg1P01869 393 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 AhrP30561 848 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Ca10P61215 328 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Znf511Q6P0X2 227 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Slc35d3Q8BGF8 422 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Kctd20Q8CDD8 419 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Akr7a2Q8CG76 367 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 CthQ8VCN5 398 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Lrrc51Q9DAK8 192 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Sp6Q9ESX2 376 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 FancmQ8BGE5 2021 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Olfr547E9PXN3 311 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Ggta1P23336 394 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Tspan5P62080 268 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Art5P70352 309 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 CmahQ61419 577 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 ArhgdigQ62160 225 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Slc35f2Q7TML3 375 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Olfr1286Q7TQY2 305 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Olfr967Q7TRA6 310 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Q80UB0 333 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Timmdc1Q8BUY5 285 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Efcab7Q8VDY4 628 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Olfr648Q8VG19 316 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Olfr763Q8VGC1 309 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Park7Q99LX0 189 aaKnown RBP17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Slc19a3Q99PL8 488 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Ccdc167Q9D162 97 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Actr10Q9QZB7 417 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Lrp4Q8VI56 1905 aa17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Lama2Q60675 3118 aaKnown RBP17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Tnrc6aQ3UHK8 1896 aaKnown RBP17.04■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Wdr25E9Q349 535 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Ogg1O08760 345 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Crisp2P16563 243 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Ly6dP35459 127 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Tas2r123P59528 333 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 TsxP70675 144 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 B630019K06RikQ7TNS5 333 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Znf8Q8BGV5 572 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Mmp28Q8CGV8 520 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 HinfpQ8K1K9 503 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Olfr394Q8VGR5 310 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Odf4Q8VI88 290 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Plpp7Q91WB2 271 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 B3gat1Q9CW73 334 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Stard5Q9EPQ7 213 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Szt2A2A9C3 3431 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Adamtsl5D3Z689 485 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Olfr1511E9PWU0 318 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Olfr1510E9PZZ6 318 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Vmn1r120K7N6J6 305 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 ChrndP02716 520 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 RptnP97347 1118 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Pom121Q8K3Z9 1200 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Olfr1351Q8VGU6 319 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Spryd4Q91WK1 207 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Slco1b2Q9JJL3 689 aa17.03■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Gm13090A2A899 111 aa17.02■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 4930595D18RikD3Z642 64 aa17.02■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Klf9O35739 244 aa17.02■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Zfp1P08042 402 aa17.02■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Gcnt2P97402 401 aa17.02■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Fam221aQ8C790 301 aa17.02■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Hist1h2ahQ8CGP6 128 aa17.02■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Pxdc1Q8JZU6 231 aa17.02■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Olfr347Q8VGK2 312 aa17.02■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Itfg2Q91WI7 443 aa17.02■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Exosc4Q921I9 245 aaKnown RBP17.02■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Clint1Q99KN9 631 aa17.02■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 BambiQ9D0L6 260 aa17.02■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 DiabloQ9JIQ3 237 aa17.02■□□□□ 0.32
Shkbp1-201ENSMUST00000003857 Fam90a1aA2A4E2 429 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Mrap2D3Z1Q2 207 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Dcpp2E9PYC2 171 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Znf296E9Q6W4 445 aaKnown RBP17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Gm20683H3BKJ1 410 aa17.02■□□□□ 0.31
Shkbp1-201ENSMUST00000003857 Gm6803J3QPI8 144 aa17.02■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms