RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	IGHMBP2	P38935	993 aa	Known RBP	19.02	■□□□□ 0.64
PHGDH-231	ENST00000641939	FOXO4	P98177	505 aa		19.02	■□□□□ 0.64
PHGDH-231	ENST00000641939	CXCL9	Q07325	125 aa		19.02	■□□□□ 0.64
PHGDH-231	ENST00000641939	LMOD1	P29536	600 aa	Predicted RBP	19.01	■□□□□ 0.63
PHGDH-231	ENST00000641939	EPHX2	P34913	555 aa		19.01	■□□□□ 0.63
PHGDH-231	ENST00000641939	APLP1	P51693	650 aa		19.01	■□□□□ 0.63
PHGDH-231	ENST00000641939	GPR101	Q96P66	508 aa	Predicted RBP	19.01	■□□□□ 0.63
PHGDH-231	ENST00000641939	MINPP1	Q9UNW1	487 aa		19.01	■□□□□ 0.63
PHGDH-231	ENST00000641939	ANKRD18B	A2A2Z9	1011 aa		19	■□□□□ 0.63
PHGDH-231	ENST00000641939	YDJC	A8MPS7	323 aa		19	■□□□□ 0.63
PHGDH-231	ENST00000641939	POTEI	P0CG38	1075 aa		19	■□□□□ 0.63
PHGDH-231	ENST00000641939	POTEJ	P0CG39	1038 aa		19	■□□□□ 0.63
PHGDH-231	ENST00000641939	SCNN1D	P51172	638 aa		19	■□□□□ 0.63
PHGDH-231	ENST00000641939	TNIP1	Q15025	636 aa		19	■□□□□ 0.63
PHGDH-231	ENST00000641939	CIAPIN1	Q6FI81	312 aa		19	■□□□□ 0.63
PHGDH-231	ENST00000641939	LDHD	Q86WU2	507 aa		19	■□□□□ 0.63
PHGDH-231	ENST00000641939	ZC3H12C	Q9C0D7	883 aa	Known RBP	19	■□□□□ 0.63
PHGDH-231	ENST00000641939	DBNDD1	Q9H9R9	158 aa		19	■□□□□ 0.63
PHGDH-231	ENST00000641939	SCN9A	Q15858	1988 aa		18.99	■□□□□ 0.63
PHGDH-231	ENST00000641939	ADAMTSL1	Q8N6G6	1762 aa		18.99	■□□□□ 0.63
PHGDH-231	ENST00000641939	RAD17	O75943	681 aa		18.99	■□□□□ 0.63
PHGDH-231	ENST00000641939	ATP2B4	P23634	1241 aa		18.99	■□□□□ 0.63
PHGDH-231	ENST00000641939	BRPF1	P55201	1214 aa	Predicted RBP	18.99	■□□□□ 0.63
PHGDH-231	ENST00000641939	IFIT5	Q13325	482 aa	Known RBP	18.99	■□□□□ 0.63
PHGDH-231	ENST00000641939	EAPP	Q56P03	285 aa	Predicted RBP	18.99	■□□□□ 0.63
PHGDH-231	ENST00000641939	EPHA10	Q5JZY3	1008 aa		18.99	■□□□□ 0.63
PHGDH-231	ENST00000641939	CHADL	Q6NUI6	762 aa		18.99	■□□□□ 0.63
PHGDH-231	ENST00000641939	LMBR1L	Q6UX01	489 aa		18.99	■□□□□ 0.63
PHGDH-231	ENST00000641939	PNMA8A	Q86V59	439 aa	Predicted RBP	18.99	■□□□□ 0.63
PHGDH-231	ENST00000641939	MPHOSPH8	Q99549	860 aa		18.99	■□□□□ 0.63
PHGDH-231	ENST00000641939	CHMP3	Q9Y3E7	222 aa		18.99	■□□□□ 0.63
PHGDH-231	ENST00000641939	UTY	O14607	1347 aa		18.99	■□□□□ 0.63
PHGDH-231	ENST00000641939	ECE2	O60344	883 aa		18.98	■□□□□ 0.63
PHGDH-231	ENST00000641939	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.98	■□□□□ 0.63
PHGDH-231	ENST00000641939	RARS	P54136	660 aa	Known RBP	18.98	■□□□□ 0.63
PHGDH-231	ENST00000641939	DOK7	Q18PE1	504 aa		18.98	■□□□□ 0.63
PHGDH-231	ENST00000641939		A0A1B0GUL6	1792 aa		18.97	■□□□□ 0.63
PHGDH-231	ENST00000641939	EPS15	P42566	896 aa		18.97	■□□□□ 0.63
PHGDH-231	ENST00000641939	GPRC5D	Q9NZD1	345 aa		18.97	■□□□□ 0.63
PHGDH-231	ENST00000641939	NOB1	Q9ULX3	412 aa	Known RBP	18.97	■□□□□ 0.63
PHGDH-231	ENST00000641939	PSME4	Q14997	1843 aa		18.97	■□□□□ 0.63
PHGDH-231	ENST00000641939		G3V3G9	751 aa		18.96	■□□□□ 0.63
PHGDH-231	ENST00000641939	GMPS	P49915	693 aa	Predicted RBP	18.96	■□□□□ 0.63
PHGDH-231	ENST00000641939	CCT4	P50991	539 aa	Known RBP	18.96	■□□□□ 0.63
PHGDH-231	ENST00000641939	CCDC57	Q2TAC2	916 aa		18.96	■□□□□ 0.63
PHGDH-231	ENST00000641939	DCAF8	Q5TAQ9	597 aa		18.96	■□□□□ 0.63
PHGDH-231	ENST00000641939	SUCLG2	Q96I99	432 aa		18.96	■□□□□ 0.63
PHGDH-231	ENST00000641939	ANKRD2	Q9GZV1	360 aa		18.96	■□□□□ 0.63
PHGDH-231	ENST00000641939	CLEC11A	Q9Y240	323 aa		18.96	■□□□□ 0.63
PHGDH-231	ENST00000641939	PSMD14	O00487	310 aa		18.95	■□□□□ 0.62
PHGDH-231	ENST00000641939	KAZALD1	Q96I82	304 aa		18.95	■□□□□ 0.62
PHGDH-231	ENST00000641939	LEMD3	Q9Y2U8	911 aa		18.95	■□□□□ 0.62
PHGDH-231	ENST00000641939	MED23	Q9ULK4	1368 aa		18.94	■□□□□ 0.62
PHGDH-231	ENST00000641939	WTIP	A6NIX2	430 aa	Predicted RBP	18.94	■□□□□ 0.62
PHGDH-231	ENST00000641939	USP50	Q70EL3	339 aa	Predicted RBP	18.94	■□□□□ 0.62
PHGDH-231	ENST00000641939	API5	Q9BZZ5	524 aa	Known RBP	18.94	■□□□□ 0.62
PHGDH-231	ENST00000641939	USP44	Q9H0E7	712 aa		18.94	■□□□□ 0.62
PHGDH-231	ENST00000641939	KCNQ5	Q9NR82	932 aa		18.94	■□□□□ 0.62
PHGDH-231	ENST00000641939	KIF16B	Q96L93	1317 aa		18.94	■□□□□ 0.62
PHGDH-231	ENST00000641939	CHRND	Q07001	517 aa		18.93	■□□□□ 0.62
PHGDH-231	ENST00000641939	TAF7L	Q5H9L4	462 aa		18.93	■□□□□ 0.62
PHGDH-231	ENST00000641939	BICC1	Q9H694	974 aa	Known RBP	18.93	■□□□□ 0.62
PHGDH-231	ENST00000641939	ADARB2	Q9NS39	739 aa	Known RBP	18.93	■□□□□ 0.62
PHGDH-231	ENST00000641939	ZBED9	Q6R2W3	1325 aa		18.93	■□□□□ 0.62
PHGDH-231	ENST00000641939	LDHAL6A	Q6ZMR3	332 aa		18.92	■□□□□ 0.62
PHGDH-231	ENST00000641939	ARHGAP45	Q92619	1136 aa		18.92	■□□□□ 0.62
PHGDH-231	ENST00000641939	DPF2	Q92785	391 aa		18.92	■□□□□ 0.62
PHGDH-231	ENST00000641939	ZNF594	Q96JF6	807 aa	Predicted RBP	18.92	■□□□□ 0.62
PHGDH-231	ENST00000641939	ZBTB12	Q9Y330	459 aa	Predicted RBP	18.92	■□□□□ 0.62
PHGDH-231	ENST00000641939	ZNF804B	A4D1E1	1349 aa		18.92	■□□□□ 0.62
PHGDH-231	ENST00000641939	RPS12	P25398	132 aa	Known RBP	18.91	■□□□□ 0.62
PHGDH-231	ENST00000641939	KCNJ4	P48050	445 aa		18.91	■□□□□ 0.62
PHGDH-231	ENST00000641939	HTRA3	P83110	453 aa		18.91	■□□□□ 0.62
PHGDH-231	ENST00000641939	RABL6	Q3YEC7	729 aa	Predicted RBP	18.91	■□□□□ 0.62
PHGDH-231	ENST00000641939	PODN	Q7Z5L7	613 aa		18.91	■□□□□ 0.62
PHGDH-231	ENST00000641939	CNOT7	Q9UIV1	285 aa	Known RBP	18.91	■□□□□ 0.62
PHGDH-231	ENST00000641939		H7C1D1	291 aa		18.9	■□□□□ 0.62
PHGDH-231	ENST00000641939	VIL1	P09327	827 aa	Known RBP	18.9	■□□□□ 0.62
PHGDH-231	ENST00000641939	MAP1S	Q66K74	1059 aa	Predicted RBP	18.9	■□□□□ 0.62
PHGDH-231	ENST00000641939	ANKRD44	Q8N8A2	993 aa		18.9	■□□□□ 0.62
PHGDH-231	ENST00000641939	CNNM1	Q9NRU3	951 aa		18.9	■□□□□ 0.62
PHGDH-231	ENST00000641939	IPO8	O15397	1037 aa	Known RBP	18.89	■□□□□ 0.61
PHGDH-231	ENST00000641939	ITGBL1	O95965	494 aa	Predicted RBP	18.89	■□□□□ 0.61
PHGDH-231	ENST00000641939	MICALL2	Q8IY33	904 aa		18.89	■□□□□ 0.61
PHGDH-231	ENST00000641939	CNTROB	Q8N137	903 aa		18.89	■□□□□ 0.61
PHGDH-231	ENST00000641939	HELB	Q8NG08	1087 aa	Predicted RBP	18.89	■□□□□ 0.61
PHGDH-231	ENST00000641939	PASK	Q96RG2	1323 aa		18.89	■□□□□ 0.61
PHGDH-231	ENST00000641939	TAF5L	O75529	589 aa		18.88	■□□□□ 0.61
PHGDH-231	ENST00000641939	BCAR3	O75815	825 aa		18.88	■□□□□ 0.61
PHGDH-231	ENST00000641939	TXNRD3	Q86VQ6	643 aa		18.88	■□□□□ 0.61
PHGDH-231	ENST00000641939	DNAJC5G	Q8N7S2	189 aa		18.88	■□□□□ 0.61
PHGDH-231	ENST00000641939	COA1	Q9GZY4	146 aa		18.88	■□□□□ 0.61
PHGDH-231	ENST00000641939	ZNF646	O15015	1829 aa	Predicted RBP	18.88	■□□□□ 0.61
PHGDH-231	ENST00000641939	SHTN1	A0MZ66	631 aa		18.87	■□□□□ 0.61
PHGDH-231	ENST00000641939	USP17L3	A6NCW0	530 aa		18.87	■□□□□ 0.61
PHGDH-231	ENST00000641939	USP17L4	A6NCW7	530 aa		18.87	■□□□□ 0.61
PHGDH-231	ENST00000641939	ZNF609	O15014	1411 aa		18.87	■□□□□ 0.61
PHGDH-231	ENST00000641939	POLR2A	P24928	1970 aa	Known RBP	18.87	■□□□□ 0.61
PHGDH-231	ENST00000641939	KLRK1	P26718	216 aa		18.87	■□□□□ 0.61
PHGDH-231	ENST00000641939	RSBN1L	Q6PCB5	846 aa	Predicted RBP	18.87	■□□□□ 0.61

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