RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 TBC1D10BQ4KMP7 808 aaPredicted RBP9.68□□□□□ -0.86
PHGDH-225ENST00000641720 KRT26Q7Z3Y9 468 aa9.68□□□□□ -0.86
PHGDH-225ENST00000641720 GRAPLQ8TC17 118 aaPredicted RBP9.68□□□□□ -0.86
PHGDH-225ENST00000641720 NLRP3Q96P20 1036 aa9.68□□□□□ -0.86
PHGDH-225ENST00000641720 THUMPD2Q9BTF0 503 aaKnown RBP9.68□□□□□ -0.86
PHGDH-225ENST00000641720 POLLQ9UGP5 575 aa9.68□□□□□ -0.86
PHGDH-225ENST00000641720 ALPK3Q96L96 1907 aa9.67□□□□□ -0.86
PHGDH-225ENST00000641720 APAF1O14727 1248 aa9.67□□□□□ -0.86
PHGDH-225ENST00000641720 ANXA1P04083 346 aa9.67□□□□□ -0.86
PHGDH-225ENST00000641720 HCLS1P14317 486 aaPredicted RBP9.67□□□□□ -0.86
PHGDH-225ENST00000641720 TMPOP42166 694 aaKnown RBP9.67□□□□□ -0.86
PHGDH-225ENST00000641720 NOM1Q5C9Z4 860 aaKnown RBP9.67□□□□□ -0.86
PHGDH-225ENST00000641720 KIF6Q6ZMV9 814 aa9.67□□□□□ -0.86
PHGDH-225ENST00000641720 PPP1R42Q7Z4L9 355 aa9.67□□□□□ -0.86
PHGDH-225ENST00000641720 CELF1Q92879 486 aaKnown RBP9.67□□□□□ -0.86
PHGDH-225ENST00000641720 CCDC102AQ96A19 550 aa9.67□□□□□ -0.86
PHGDH-225ENST00000641720 GMLQ99445 158 aa9.67□□□□□ -0.86
PHGDH-225ENST00000641720 PNNQ9H307 717 aaKnown RBP9.67□□□□□ -0.86
PHGDH-225ENST00000641720 DBNDD1Q9H9R9 158 aa9.67□□□□□ -0.86
PHGDH-225ENST00000641720 ARAP2Q8WZ64 1704 aa9.66□□□□□ -0.86
PHGDH-225ENST00000641720 NEFMP07197 916 aa9.66□□□□□ -0.86
PHGDH-225ENST00000641720 VIL1P09327 827 aaKnown RBP9.66□□□□□ -0.86
PHGDH-225ENST00000641720 ZNF157P51786 506 aaPredicted RBP9.66□□□□□ -0.86
PHGDH-225ENST00000641720 ZNF280AP59817 542 aaPredicted RBP9.66□□□□□ -0.86
PHGDH-225ENST00000641720 NEUROD2Q15784 382 aa9.66□□□□□ -0.86
PHGDH-225ENST00000641720 ZNF296Q8WUU4 475 aaPredicted RBP9.66□□□□□ -0.86
PHGDH-225ENST00000641720 RTF1Q92541 710 aaKnown RBP9.66□□□□□ -0.86
PHGDH-225ENST00000641720 CDCA5Q96FF9 252 aa9.66□□□□□ -0.86
PHGDH-225ENST00000641720 UTP14AQ9BVJ6 771 aaKnown RBP9.66□□□□□ -0.86
PHGDH-225ENST00000641720 BCL2L13Q9BXK5 485 aa9.66□□□□□ -0.86
PHGDH-225ENST00000641720 CFHR5Q9BXR6 569 aa9.66□□□□□ -0.86
PHGDH-225ENST00000641720 R3HDMLQ9H3Y0 253 aa9.66□□□□□ -0.86
PHGDH-225ENST00000641720 GGA3Q9NZ52 723 aa9.66□□□□□ -0.86
PHGDH-225ENST00000641720 TRIM35Q9UPQ4 493 aa9.66□□□□□ -0.86
PHGDH-225ENST00000641720 SSC5DA1L4H1 1573 aa9.66□□□□□ -0.86
PHGDH-225ENST00000641720 UNC80Q8N2C7 3258 aa9.65□□□□□ -0.86
PHGDH-225ENST00000641720 H7C1D1 291 aa9.65□□□□□ -0.86
PHGDH-225ENST00000641720 RPS12P25398 132 aaKnown RBP9.65□□□□□ -0.86
PHGDH-225ENST00000641720 RIPK4P57078 832 aa9.65□□□□□ -0.86
PHGDH-225ENST00000641720 MOB2Q70IA6 237 aa9.65□□□□□ -0.86
PHGDH-225ENST00000641720 ECE2O60344 883 aa9.64□□□□□ -0.87
PHGDH-225ENST00000641720 FXR1P51114 621 aaKnown RBP eCLIP9.64□□□□□ -0.87
PHGDH-225ENST00000641720 GPSM2P81274 684 aa9.64□□□□□ -0.87
PHGDH-225ENST00000641720 CAP1Q01518 475 aa9.64□□□□□ -0.87
PHGDH-225ENST00000641720 SF3B3Q15393 1217 aaKnown RBP9.64□□□□□ -0.87
PHGDH-225ENST00000641720 KIF4BQ2VIQ3 1234 aa9.64□□□□□ -0.87
PHGDH-225ENST00000641720 HABP4Q5JVS0 413 aaKnown RBP9.64□□□□□ -0.87
PHGDH-225ENST00000641720 C2orf69Q8N8R5 385 aa9.64□□□□□ -0.87
PHGDH-225ENST00000641720 PITPNM2Q9BZ72 1349 aa9.63□□□□□ -0.87
PHGDH-225ENST00000641720 TM4SF4P48230 202 aa9.63□□□□□ -0.87
PHGDH-225ENST00000641720 TCIRG1Q13488 830 aa9.63□□□□□ -0.87
PHGDH-225ENST00000641720 TMC4Q7Z404 712 aa9.63□□□□□ -0.87
PHGDH-225ENST00000641720 TBC1D16Q8TBP0 767 aa9.63□□□□□ -0.87
PHGDH-225ENST00000641720 ISCA1Q9BUE6 129 aa9.63□□□□□ -0.87
PHGDH-225ENST00000641720 PODXL2Q9NZ53 605 aa9.63□□□□□ -0.87
PHGDH-225ENST00000641720 MGAMO43451 1857 aa9.63□□□□□ -0.87
PHGDH-225ENST00000641720 CACNA1FO60840 1977 aa9.63□□□□□ -0.87
PHGDH-225ENST00000641720 SH3TC1Q8TE82 1336 aa9.62□□□□□ -0.87
PHGDH-225ENST00000641720 POTEFA5A3E0 1075 aa9.62□□□□□ -0.87
PHGDH-225ENST00000641720 GPR25O00155 361 aa9.62□□□□□ -0.87
PHGDH-225ENST00000641720 LMOD3Q0VAK6 560 aa9.62□□□□□ -0.87
PHGDH-225ENST00000641720 PKN2Q16513 984 aaKnown RBP9.62□□□□□ -0.87
PHGDH-225ENST00000641720 WASHC4Q2M389 1173 aa9.62□□□□□ -0.87
PHGDH-225ENST00000641720 FBXO46Q6PJ61 603 aaPredicted RBP9.62□□□□□ -0.87
PHGDH-225ENST00000641720 DDX46Q7L014 1031 aaKnown RBP9.62□□□□□ -0.87
PHGDH-225ENST00000641720 REM2Q8IYK8 340 aaPredicted RBP9.62□□□□□ -0.87
PHGDH-225ENST00000641720 TBC1D8O95759 1140 aa9.61□□□□□ -0.87
PHGDH-225ENST00000641720 FKBP1BP68106 108 aa9.61□□□□□ -0.87
PHGDH-225ENST00000641720 DOK7Q18PE1 504 aa9.61□□□□□ -0.87
PHGDH-225ENST00000641720 ANGEL2Q5VTE6 544 aaKnown RBP9.61□□□□□ -0.87
PHGDH-225ENST00000641720 COPS6Q7L5N1 327 aa9.61□□□□□ -0.87
PHGDH-225ENST00000641720 XAGE3Q8WTP9 111 aa9.61□□□□□ -0.87
PHGDH-225ENST00000641720 DCPSQ96C86 337 aaKnown RBP9.61□□□□□ -0.87
PHGDH-225ENST00000641720 SCAF8Q9UPN6 1271 aaKnown RBP9.61□□□□□ -0.87
PHGDH-225ENST00000641720 SALL2Q9Y467 1007 aaPredicted RBP9.61□□□□□ -0.87
PHGDH-225ENST00000641720 WTIPA6NIX2 430 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-225ENST00000641720 RIMBP2O15034 1052 aa9.6□□□□□ -0.87
PHGDH-225ENST00000641720 SCARF1Q14162 830 aa9.6□□□□□ -0.87
PHGDH-225ENST00000641720 CCDC27Q2M243 656 aa9.6□□□□□ -0.87
PHGDH-225ENST00000641720 KRT24Q2M2I5 525 aa9.6□□□□□ -0.87
PHGDH-225ENST00000641720 RBM26Q5T8P6 1007 aaKnown RBP9.6□□□□□ -0.87
PHGDH-225ENST00000641720 WWC1Q8IX03 1113 aa9.6□□□□□ -0.87
PHGDH-225ENST00000641720 TRMT112Q9UI30 125 aaKnown RBP9.6□□□□□ -0.87
PHGDH-225ENST00000641720 VCANP13611 3396 aa9.6□□□□□ -0.87
PHGDH-225ENST00000641720 DOCK3Q8IZD9 2030 aa9.6□□□□□ -0.87
PHGDH-225ENST00000641720 ZNF521Q96K83 1311 aa9.59□□□□□ -0.87
PHGDH-225ENST00000641720 SPTBN5Q9NRC6 3674 aaKnown RBP9.59□□□□□ -0.87
PHGDH-225ENST00000641720 LAMA2P24043 3122 aaKnown RBP9.59□□□□□ -0.87
PHGDH-225ENST00000641720 HSP90AB3PQ58FF7 597 aa9.59□□□□□ -0.87
PHGDH-225ENST00000641720 RSBN1LQ6PCB5 846 aaPredicted RBP9.59□□□□□ -0.87
PHGDH-225ENST00000641720 SULF1Q8IWU6 871 aa9.59□□□□□ -0.87
PHGDH-225ENST00000641720 AGBL3Q8NEM8 1001 aa9.59□□□□□ -0.87
PHGDH-225ENST00000641720 ZNF428Q96B54 188 aa9.59□□□□□ -0.87
PHGDH-225ENST00000641720 ZBED3Q96IU2 234 aaPredicted RBP9.59□□□□□ -0.87
PHGDH-225ENST00000641720 NSFL1CQ9UNZ2 370 aaKnown RBP9.59□□□□□ -0.87
PHGDH-225ENST00000641720 PTPRFP10586 1907 aa9.58□□□□□ -0.88
PHGDH-225ENST00000641720 UBE2Q2LH0YL09 131 aa9.58□□□□□ -0.88
PHGDH-225ENST00000641720 TRIM28Q13263 835 aaKnown RBP9.58□□□□□ -0.88
PHGDH-225ENST00000641720 NBPF9Q3BBW0 867 aa9.58□□□□□ -0.88
PHGDH-225ENST00000641720 LDLRAD1Q5T700 205 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms