RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 NTSR2O95665 410 aa16.08■□□□□ 0.16
PHGDH-221ENST00000641573 CTSWP56202 376 aa16.08■□□□□ 0.16
PHGDH-221ENST00000641573 CCDC57Q2TAC2 916 aa16.08■□□□□ 0.16
PHGDH-221ENST00000641573 DPY19L2Q6NUT2 758 aa16.08■□□□□ 0.16
PHGDH-221ENST00000641573 MKRN1Q9UHC7 482 aaKnown RBP16.08■□□□□ 0.16
PHGDH-221ENST00000641573 AOX1Q06278 1338 aa16.08■□□□□ 0.16
PHGDH-221ENST00000641573 TBC1D9BQ66K14 1250 aa16.07■□□□□ 0.16
PHGDH-221ENST00000641573 BICDL1Q6ZP65 573 aa16.07■□□□□ 0.16
PHGDH-221ENST00000641573 TTLL11Q8NHH1 800 aa16.07■□□□□ 0.16
PHGDH-221ENST00000641573 AIDAQ96BJ3 306 aa16.07■□□□□ 0.16
PHGDH-221ENST00000641573 ZNF594Q96JF6 807 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-221ENST00000641573 CCDC85AQ96PX6 553 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-221ENST00000641573 CREBZFQ9NS37 354 aa16.07■□□□□ 0.16
PHGDH-221ENST00000641573 TIAM2Q8IVF5 1701 aa16.07■□□□□ 0.16
PHGDH-221ENST00000641573 EYA2O00167 538 aa16.06■□□□□ 0.16
PHGDH-221ENST00000641573 POLRMTO00411 1230 aaKnown RBP16.06■□□□□ 0.16
PHGDH-221ENST00000641573 IFIT2P09913 472 aaKnown RBP16.06■□□□□ 0.16
PHGDH-221ENST00000641573 HCLS1P14317 486 aaPredicted RBP16.06■□□□□ 0.16
PHGDH-221ENST00000641573 HSP90B1P14625 803 aaKnown RBP16.06■□□□□ 0.16
PHGDH-221ENST00000641573 IFIT5Q13325 482 aaKnown RBP16.06■□□□□ 0.16
PHGDH-221ENST00000641573 TSHZ3Q63HK5 1081 aa16.06■□□□□ 0.16
PHGDH-221ENST00000641573 AACSQ86V21 672 aa16.06■□□□□ 0.16
PHGDH-221ENST00000641573 PRDM10Q9NQV6 1147 aa16.06■□□□□ 0.16
PHGDH-221ENST00000641573 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.06■□□□□ 0.16
PHGDH-221ENST00000641573 CIAO1O76071 339 aa16.05■□□□□ 0.16
PHGDH-221ENST00000641573 SEC24BO95487 1268 aa16.05■□□□□ 0.16
PHGDH-221ENST00000641573 IL15P40933 162 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-221ENST00000641573 TFCP2Q12800 502 aa16.05■□□□□ 0.16
PHGDH-221ENST00000641573 TAF7LQ5H9L4 462 aa16.05■□□□□ 0.16
PHGDH-221ENST00000641573 ATG9AQ7Z3C6 839 aa16.05■□□□□ 0.16
PHGDH-221ENST00000641573 EAF2Q96CJ1 260 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-221ENST00000641573 SETDB2Q96T68 719 aa16.05■□□□□ 0.16
PHGDH-221ENST00000641573 GREM2Q9H772 168 aa16.05■□□□□ 0.16
PHGDH-221ENST00000641573 NRXN2Q9P2S2 1712 aa16.05■□□□□ 0.16
PHGDH-221ENST00000641573 ANKRD18BA2A2Z9 1011 aa16.04■□□□□ 0.16
PHGDH-221ENST00000641573 FOXN1O15353 648 aa16.04■□□□□ 0.16
PHGDH-221ENST00000641573 CDC45O75419 566 aa16.04■□□□□ 0.16
PHGDH-221ENST00000641573 SDSP20132 328 aa16.04■□□□□ 0.16
PHGDH-221ENST00000641573 ITGA6P23229 1130 aa16.04■□□□□ 0.16
PHGDH-221ENST00000641573 TM4SF1P30408 202 aa16.04■□□□□ 0.16
PHGDH-221ENST00000641573 TTLL6Q8N841 843 aa16.04■□□□□ 0.16
PHGDH-221ENST00000641573 FBXO3Q9UK99 471 aa16.04■□□□□ 0.16
PHGDH-221ENST00000641573 TTC41PQ6P2S7 1318 aa16.03■□□□□ 0.16
PHGDH-221ENST00000641573 CTCFP49711 727 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-221ENST00000641573 ERFEQ4G0M1 354 aa16.03■□□□□ 0.16
PHGDH-221ENST00000641573 LRRC24Q50LG9 513 aa16.03■□□□□ 0.16
PHGDH-221ENST00000641573 CHADLQ6NUI6 762 aa16.03■□□□□ 0.16
PHGDH-221ENST00000641573 GPATCH3Q96I76 525 aa16.03■□□□□ 0.16
PHGDH-221ENST00000641573 PUS3Q9BZE2 481 aaKnown RBP16.03■□□□□ 0.16
PHGDH-221ENST00000641573 NYXQ9GZU5 481 aa16.03■□□□□ 0.16
PHGDH-221ENST00000641573 CCDC8Q9H0W5 538 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-221ENST00000641573 TNNI3KQ59H18 835 aa16.02■□□□□ 0.16
PHGDH-221ENST00000641573 PI4K2BQ8TCG2 481 aa16.02■□□□□ 0.16
PHGDH-221ENST00000641573 ECHDC1Q9NTX5 307 aa16.02■□□□□ 0.16
PHGDH-221ENST00000641573 FPGT-TNNI3KV9GXZ4 949 aa16.02■□□□□ 0.16
PHGDH-221ENST00000641573 LAMB2P55268 1798 aa16.01■□□□□ 0.15
PHGDH-221ENST00000641573 GTF2E1P29083 439 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-221ENST00000641573 CCDC152Q4G0S7 254 aa16.01■□□□□ 0.15
PHGDH-221ENST00000641573 SLC10A5Q5PT55 438 aa16.01■□□□□ 0.15
PHGDH-221ENST00000641573 TBC1D9Q6ZT07 1266 aa16.01■□□□□ 0.15
PHGDH-221ENST00000641573 NBPF5PQ86XG9 351 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-221ENST00000641573 GPR108Q9NPR9 543 aa16.01■□□□□ 0.15
PHGDH-221ENST00000641573 DDX60Q8IY21 1712 aaKnown RBP16.01■□□□□ 0.15
PHGDH-221ENST00000641573 MYH3P11055 1940 aa16■□□□□ 0.15
PHGDH-221ENST00000641573 POTECB2RU33 542 aa16■□□□□ 0.15
PHGDH-221ENST00000641573 H0YIN7 160 aa16■□□□□ 0.15
PHGDH-221ENST00000641573 ERC2O15083 957 aa16■□□□□ 0.15
PHGDH-221ENST00000641573 GLRX3O76003 335 aaKnown RBP16■□□□□ 0.15
PHGDH-221ENST00000641573 NFIXQ14938 502 aa16■□□□□ 0.15
PHGDH-221ENST00000641573 C2CD5Q86YS7 1000 aa16■□□□□ 0.15
PHGDH-221ENST00000641573 TLR7Q9NYK1 1049 aaKnown RBP16■□□□□ 0.15
PHGDH-221ENST00000641573 CEP126Q9P2H0 1117 aa16■□□□□ 0.15
PHGDH-221ENST00000641573 CNTNAP1P78357 1384 aa16■□□□□ 0.15
PHGDH-221ENST00000641573 RTL9Q8NET4 1388 aa16■□□□□ 0.15
PHGDH-221ENST00000641573 TRIM6-TRIM34B2RNG4 842 aa15.99■□□□□ 0.15
PHGDH-221ENST00000641573 NFKBIEO00221 500 aa15.99■□□□□ 0.15
PHGDH-221ENST00000641573 TPTE2Q6XPS3 522 aa15.99■□□□□ 0.15
PHGDH-221ENST00000641573 LDHAL6AQ6ZMR3 332 aa15.99■□□□□ 0.15
PHGDH-221ENST00000641573 UPF2Q9HAU5 1272 aaKnown RBP15.99■□□□□ 0.15
PHGDH-221ENST00000641573 CCDC88AQ3V6T2 1871 aa15.99■□□□□ 0.15
PHGDH-221ENST00000641573 CARMIL3Q8ND23 1372 aa15.99■□□□□ 0.15
PHGDH-221ENST00000641573 ABCC12Q96J65 1359 aa15.99■□□□□ 0.15
PHGDH-221ENST00000641573 DLEC1Q9Y238 1755 aa15.98■□□□□ 0.15
PHGDH-221ENST00000641573 MFAP1P55081 439 aaKnown RBP15.98■□□□□ 0.15
PHGDH-221ENST00000641573 SF3B3Q15393 1217 aaKnown RBP15.98■□□□□ 0.15
PHGDH-221ENST00000641573 CASC1Q6TDU7 716 aa15.98■□□□□ 0.15
PHGDH-221ENST00000641573 RILPL2Q969X0 211 aa15.98■□□□□ 0.15
PHGDH-221ENST00000641573 SEC31BQ9NQW1 1179 aa15.98■□□□□ 0.15
PHGDH-221ENST00000641573 CNNM1Q9NRU3 951 aa15.98■□□□□ 0.15
PHGDH-221ENST00000641573 DBNLQ9UJU6 430 aaKnown RBP15.98■□□□□ 0.15
PHGDH-221ENST00000641573 RIPOR2Q9Y4F9 1068 aa15.98■□□□□ 0.15
PHGDH-221ENST00000641573 MAP4K4O95819 1239 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-221ENST00000641573 SERPINB2P05120 415 aa15.97■□□□□ 0.15
PHGDH-221ENST00000641573 ANP32AP39687 249 aaKnown RBP15.97■□□□□ 0.15
PHGDH-221ENST00000641573 METTL24Q5JXM2 366 aa15.97■□□□□ 0.15
PHGDH-221ENST00000641573 C3orf67Q6ZVT6 689 aa15.97■□□□□ 0.15
PHGDH-221ENST00000641573 DBNDD2Q9BQY9 259 aa15.97■□□□□ 0.15
PHGDH-221ENST00000641573 PCDH10Q9P2E7 1040 aa15.97■□□□□ 0.15
PHGDH-221ENST00000641573 ZNF609O15014 1411 aa15.96■□□□□ 0.15
PHGDH-221ENST00000641573 RIC1Q4ADV7 1423 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms