RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 FHDC1Q9C0D6 1143 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-220ENST00000641570 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-220ENST00000641570 DCAF8L1A6NGE4 600 aa15.95■□□□□ 0.14
PHGDH-220ENST00000641570 GORABQ5T7V8 394 aa15.95■□□□□ 0.14
PHGDH-220ENST00000641570 ANKRD45Q5TZF3 282 aa15.95■□□□□ 0.14
PHGDH-220ENST00000641570 DCTPP1Q9H773 170 aa15.95■□□□□ 0.14
PHGDH-220ENST00000641570 MYH3P11055 1940 aa15.95■□□□□ 0.14
PHGDH-220ENST00000641570 TNRC6CQ9HCJ0 1690 aaKnown RBP15.95■□□□□ 0.14
PHGDH-220ENST00000641570 G3V3G9 751 aa15.94■□□□□ 0.14
PHGDH-220ENST00000641570 IFIT2P09913 472 aaKnown RBP15.94■□□□□ 0.14
PHGDH-220ENST00000641570 RFX5P48382 616 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-220ENST00000641570 GRIPAP1Q4V328 841 aa15.94■□□□□ 0.14
PHGDH-220ENST00000641570 DCAF8Q5TAQ9 597 aa15.94■□□□□ 0.14
PHGDH-220ENST00000641570 CC2D2BQ6DHV5 1058 aa15.94■□□□□ 0.14
PHGDH-220ENST00000641570 SIRT2Q8IXJ6 389 aa15.94■□□□□ 0.14
PHGDH-220ENST00000641570 BCS1LQ9Y276 419 aa15.94■□□□□ 0.14
PHGDH-220ENST00000641570 NOP58Q9Y2X3 529 aaKnown RBP15.94■□□□□ 0.14
PHGDH-220ENST00000641570 IFIT1P09914 478 aaKnown RBP15.93■□□□□ 0.14
PHGDH-220ENST00000641570 SLC5A1P13866 664 aa15.93■□□□□ 0.14
PHGDH-220ENST00000641570 CCDC93Q567U6 631 aa15.93■□□□□ 0.14
PHGDH-220ENST00000641570 DPP8Q6V1X1 898 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-220ENST00000641570 VPS37DQ86XT2 251 aa15.93■□□□□ 0.14
PHGDH-220ENST00000641570 XDHP47989 1333 aa15.93■□□□□ 0.14
PHGDH-220ENST00000641570 CHRNDQ07001 517 aa15.92■□□□□ 0.14
PHGDH-220ENST00000641570 PUM3Q15397 648 aaKnown RBP15.92■□□□□ 0.14
PHGDH-220ENST00000641570 LRRC24Q50LG9 513 aa15.92■□□□□ 0.14
PHGDH-220ENST00000641570 SP8Q8IXZ3 490 aa15.92■□□□□ 0.14
PHGDH-220ENST00000641570 SUPT20HQ8NEM7 779 aa15.92■□□□□ 0.14
PHGDH-220ENST00000641570 RHPN1Q8TCX5 695 aa15.92■□□□□ 0.14
PHGDH-220ENST00000641570 NEUROD6Q96NK8 337 aa15.92■□□□□ 0.14
PHGDH-220ENST00000641570 EYA3Q99504 573 aa15.92■□□□□ 0.14
PHGDH-220ENST00000641570 GGA1Q9UJY5 639 aa15.92■□□□□ 0.14
PHGDH-220ENST00000641570 WWC3Q9ULE0 1092 aa15.92■□□□□ 0.14
PHGDH-220ENST00000641570 NSFL1CQ9UNZ2 370 aaKnown RBP15.92■□□□□ 0.14
PHGDH-220ENST00000641570 ATP6V0A2Q9Y487 856 aa15.92■□□□□ 0.14
PHGDH-220ENST00000641570 C6orf229H3BNL8 230 aa15.91■□□□□ 0.14
PHGDH-220ENST00000641570 UFL1O94874 794 aa15.91■□□□□ 0.14
PHGDH-220ENST00000641570 IGHDP01880 384 aa15.91■□□□□ 0.14
PHGDH-220ENST00000641570 TFCP2Q12800 502 aa15.91■□□□□ 0.14
PHGDH-220ENST00000641570 ATP2B3Q16720 1220 aa15.91■□□□□ 0.14
PHGDH-220ENST00000641570 RTKN2Q8IZC4 609 aa15.91■□□□□ 0.14
PHGDH-220ENST00000641570 MPNDQ8N594 471 aa15.91■□□□□ 0.14
PHGDH-220ENST00000641570 PUS3Q9BZE2 481 aaKnown RBP15.91■□□□□ 0.14
PHGDH-220ENST00000641570 MINPP1Q9UNW1 487 aa15.91■□□□□ 0.14
PHGDH-220ENST00000641570 C21orf2O43822 256 aa15.9■□□□□ 0.14
PHGDH-220ENST00000641570 ATP2B4P23634 1241 aa15.9■□□□□ 0.14
PHGDH-220ENST00000641570 CAVIN4Q5BKX8 364 aa15.9■□□□□ 0.14
PHGDH-220ENST00000641570 AACSQ86V21 672 aa15.9■□□□□ 0.14
PHGDH-220ENST00000641570 NLGN2Q8NFZ4 835 aa15.9■□□□□ 0.14
PHGDH-220ENST00000641570 SYT17Q9BSW7 474 aa15.9■□□□□ 0.14
PHGDH-220ENST00000641570 IL1RAPL2Q9NP60 686 aa15.9■□□□□ 0.14
PHGDH-220ENST00000641570 LEMD3Q9Y2U8 911 aa15.9■□□□□ 0.14
PHGDH-220ENST00000641570 FRAT2O75474 233 aaPredicted RBP15.89■□□□□ 0.13
PHGDH-220ENST00000641570 PDE8BO95263 885 aa15.89■□□□□ 0.13
PHGDH-220ENST00000641570 CHD1LQ86WJ1 897 aa15.89■□□□□ 0.13
PHGDH-220ENST00000641570 SMC5Q8IY18 1101 aa15.89■□□□□ 0.13
PHGDH-220ENST00000641570 HELBQ8NG08 1087 aaPredicted RBP15.89■□□□□ 0.13
PHGDH-220ENST00000641570 LPIN2Q92539 896 aa15.89■□□□□ 0.13
PHGDH-220ENST00000641570 GNL3LQ9NVN8 582 aaKnown RBP15.89■□□□□ 0.13
PHGDH-220ENST00000641570 RIPOR2Q9Y4F9 1068 aa15.89■□□□□ 0.13
PHGDH-220ENST00000641570 TAF5LO75529 589 aa15.88■□□□□ 0.13
PHGDH-220ENST00000641570 UBE4AQ14139 1066 aa15.88■□□□□ 0.13
PHGDH-220ENST00000641570 GPR162Q16538 588 aa15.88■□□□□ 0.13
PHGDH-220ENST00000641570 TNNI3KQ59H18 835 aa15.88■□□□□ 0.13
PHGDH-220ENST00000641570 CCDC158Q5M9N0 1113 aa15.88■□□□□ 0.13
PHGDH-220ENST00000641570 ATG9AQ7Z3C6 839 aa15.88■□□□□ 0.13
PHGDH-220ENST00000641570 LNPKQ9C0E8 428 aa15.88■□□□□ 0.13
PHGDH-220ENST00000641570 GPR108Q9NPR9 543 aa15.88■□□□□ 0.13
PHGDH-220ENST00000641570 FPGT-TNNI3KV9GXZ4 949 aa15.88■□□□□ 0.13
PHGDH-220ENST00000641570 ANKRD31Q8N7Z5 1873 aa15.88■□□□□ 0.13
PHGDH-220ENST00000641570 ZNF804BA4D1E1 1349 aa15.88■□□□□ 0.13
PHGDH-220ENST00000641570 NUCB1Q02818 461 aa15.87■□□□□ 0.13
PHGDH-220ENST00000641570 TTC39AQ5SRH9 613 aa15.87■□□□□ 0.13
PHGDH-220ENST00000641570 ZNF804AQ7Z570 1209 aa15.87■□□□□ 0.13
PHGDH-220ENST00000641570 ZC3H12CQ9C0D7 883 aaKnown RBP15.87■□□□□ 0.13
PHGDH-220ENST00000641570 LRP5O75197 1615 aa15.86■□□□□ 0.13
PHGDH-220ENST00000641570 COL11A2P13942 1736 aaPredicted RBP15.86■□□□□ 0.13
PHGDH-220ENST00000641570 A0A1B0GUL7 405 aa15.86■□□□□ 0.13
PHGDH-220ENST00000641570 ERC2O15083 957 aa15.86■□□□□ 0.13
PHGDH-220ENST00000641570 SMARCA5O60264 1052 aaPredicted RBP15.86■□□□□ 0.13
PHGDH-220ENST00000641570 GPSM2P81274 684 aa15.86■□□□□ 0.13
PHGDH-220ENST00000641570 SASH1O94885 1247 aa15.85■□□□□ 0.13
PHGDH-220ENST00000641570 TAOK3Q9H2K8 898 aa15.85■□□□□ 0.13
PHGDH-220ENST00000641570 PODXL2Q9NZ53 605 aa15.85■□□□□ 0.13
PHGDH-220ENST00000641570 KDM2BQ8NHM5 1336 aa15.85■□□□□ 0.13
PHGDH-220ENST00000641570 KIF13BQ9NQT8 1826 aa15.84■□□□□ 0.13
PHGDH-220ENST00000641570 KCNA3P22001 575 aa15.84■□□□□ 0.13
PHGDH-220ENST00000641570 WASHC4Q2M389 1173 aa15.84■□□□□ 0.13
PHGDH-220ENST00000641570 CCDC8Q9H0W5 538 aaPredicted RBP15.84■□□□□ 0.13
PHGDH-220ENST00000641570 ZNF609O15014 1411 aa15.84■□□□□ 0.13
PHGDH-220ENST00000641570 MX1P20591 662 aa15.83■□□□□ 0.12
PHGDH-220ENST00000641570 FKBP4Q02790 459 aaKnown RBP eCLIP15.83■□□□□ 0.12
PHGDH-220ENST00000641570 ARHGAP27Q6ZUM4 889 aa15.83■□□□□ 0.12
PHGDH-220ENST00000641570 TBC1D16Q8TBP0 767 aa15.83■□□□□ 0.12
PHGDH-220ENST00000641570 RIMBP2O15034 1052 aa15.82■□□□□ 0.12
PHGDH-220ENST00000641570 PPIP5K2O43314 1243 aa15.82■□□□□ 0.12
PHGDH-220ENST00000641570 GRIN3BO60391 1043 aa15.82■□□□□ 0.12
PHGDH-220ENST00000641570 UQCRFS1P1P0C7P4 283 aa15.82■□□□□ 0.12
PHGDH-220ENST00000641570 RGS3P49796 1198 aa15.82■□□□□ 0.12
PHGDH-220ENST00000641570 JDP2Q8WYK2 163 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms