RNA–Protein interactions for RNA: ENST00000638878.1

PAX6-242, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-242ENST00000638878 DDX60Q8IY21 1712 aaKnown RBP12.28□□□□□ -0.44
PAX6-242ENST00000638878 INTS3Q68E01 1043 aaKnown RBP12.27□□□□□ -0.45
PAX6-242ENST00000638878 SLC4A10Q6U841 1118 aa12.27□□□□□ -0.45
PAX6-242ENST00000638878 FRAT1Q92837 279 aaPredicted RBP12.27□□□□□ -0.45
PAX6-242ENST00000638878 TAOK3Q9H2K8 898 aa12.27□□□□□ -0.45
PAX6-242ENST00000638878 C9orf78Q9NZ63 289 aaPredicted RBP12.27□□□□□ -0.45
PAX6-242ENST00000638878 LAMB2P55268 1798 aa12.26□□□□□ -0.45
PAX6-242ENST00000638878 FOXO4P98177 505 aa12.26□□□□□ -0.45
PAX6-242ENST00000638878 C9orf131Q5VYM1 1079 aa12.26□□□□□ -0.45
PAX6-242ENST00000638878 SUPT20HQ8NEM7 779 aa12.26□□□□□ -0.45
PAX6-242ENST00000638878 CLUAP1Q96AJ1 413 aa12.26□□□□□ -0.45
PAX6-242ENST00000638878 CDC5LQ99459 802 aaKnown RBP12.26□□□□□ -0.45
PAX6-242ENST00000638878 BCL2L13Q9BXK5 485 aa12.26□□□□□ -0.45
PAX6-242ENST00000638878 USP44Q9H0E7 712 aa12.26□□□□□ -0.45
PAX6-242ENST00000638878 FER1L6Q2WGJ9 1857 aa12.26□□□□□ -0.45
PAX6-242ENST00000638878 ATF7IPQ6VMQ6 1270 aa12.25□□□□□ -0.45
PAX6-242ENST00000638878 FAM43AQ8N2R8 423 aa12.25□□□□□ -0.45
PAX6-242ENST00000638878 BSDC1Q9NW68 430 aaPredicted RBP12.25□□□□□ -0.45
PAX6-242ENST00000638878 BCAR3O75815 825 aa12.24□□□□□ -0.45
PAX6-242ENST00000638878 PRELPP51888 382 aa12.24□□□□□ -0.45
PAX6-242ENST00000638878 L1TD1Q5T7N2 865 aaKnown RBP12.24□□□□□ -0.45
PAX6-242ENST00000638878 CELF1Q92879 486 aaKnown RBP12.24□□□□□ -0.45
PAX6-242ENST00000638878 UPF2Q9HAU5 1272 aaKnown RBP12.24□□□□□ -0.45
PAX6-242ENST00000638878 SBF1O95248 1867 aa12.24□□□□□ -0.45
PAX6-242ENST00000638878 NBPF7P0C2Y1 421 aaPredicted RBP12.23□□□□□ -0.45
PAX6-242ENST00000638878 RGS3P49796 1198 aa12.23□□□□□ -0.45
PAX6-242ENST00000638878 RABL6Q3YEC7 729 aaPredicted RBP12.23□□□□□ -0.45
PAX6-242ENST00000638878 ZKSCAN2Q63HK3 967 aa12.23□□□□□ -0.45
PAX6-242ENST00000638878 ANKRD18AQ8IVF6 992 aa12.23□□□□□ -0.45
PAX6-242ENST00000638878 MPNDQ8N594 471 aa12.23□□□□□ -0.45
PAX6-242ENST00000638878 JARID2Q92833 1246 aaPredicted RBP12.23□□□□□ -0.45
PAX6-242ENST00000638878 KAZALD1Q96I82 304 aa12.23□□□□□ -0.45
PAX6-242ENST00000638878 RNF181Q9P0P0 153 aa12.23□□□□□ -0.45
PAX6-242ENST00000638878 GLTPD2A6NH11 291 aa12.22□□□□□ -0.45
PAX6-242ENST00000638878 TRIM27P14373 513 aa12.22□□□□□ -0.45
PAX6-242ENST00000638878 HSPA6P17066 643 aa12.22□□□□□ -0.45
PAX6-242ENST00000638878 ITGA6P23229 1130 aa12.22□□□□□ -0.45
PAX6-242ENST00000638878 IFIT5Q13325 482 aaKnown RBP12.22□□□□□ -0.45
PAX6-242ENST00000638878 DPY19L2Q6NUT2 758 aa12.22□□□□□ -0.45
PAX6-242ENST00000638878 DPP8Q6V1X1 898 aaPredicted RBP12.22□□□□□ -0.45
PAX6-242ENST00000638878 GREM2Q9H772 168 aa12.22□□□□□ -0.45
PAX6-242ENST00000638878 SEC31BQ9NQW1 1179 aa12.22□□□□□ -0.45
PAX6-242ENST00000638878 U3KPZ7 1027 aaPredicted RBP12.22□□□□□ -0.45
PAX6-242ENST00000638878 ANKRD18BA2A2Z9 1011 aa12.21□□□□□ -0.45
PAX6-242ENST00000638878 FZD9O00144 591 aa12.21□□□□□ -0.45
PAX6-242ENST00000638878 IARSP41252 1262 aaKnown RBP12.21□□□□□ -0.45
PAX6-242ENST00000638878 RASSF7Q02833 373 aa12.21□□□□□ -0.45
PAX6-242ENST00000638878 CCDC57Q2TAC2 916 aa12.21□□□□□ -0.45
PAX6-242ENST00000638878 LMBR1LQ6UX01 489 aa12.21□□□□□ -0.45
PAX6-242ENST00000638878 OLFM4Q6UX06 510 aa12.21□□□□□ -0.45
PAX6-242ENST00000638878 SKAP1Q86WV1 359 aa12.21□□□□□ -0.45
PAX6-242ENST00000638878 FRAT2O75474 233 aaPredicted RBP12.2□□□□□ -0.46
PAX6-242ENST00000638878 IGHDP01880 384 aa12.2□□□□□ -0.46
PAX6-242ENST00000638878 GNAI3P08754 354 aa12.2□□□□□ -0.46
PAX6-242ENST00000638878 IGHMBP2P38935 993 aaKnown RBP12.2□□□□□ -0.46
PAX6-242ENST00000638878 SLC4A3P48751 1232 aa12.2□□□□□ -0.46
PAX6-242ENST00000638878 KIAA2012Q0VF49 1180 aa12.2□□□□□ -0.46
PAX6-242ENST00000638878 JDP2Q8WYK2 163 aa12.2□□□□□ -0.46
PAX6-242ENST00000638878 RWDD1Q9H446 243 aaPredicted RBP12.2□□□□□ -0.46
PAX6-242ENST00000638878 MINPP1Q9UNW1 487 aa12.2□□□□□ -0.46
PAX6-242ENST00000638878 LRRC37AA6NMS7 1700 aa12.2□□□□□ -0.46
PAX6-242ENST00000638878 EPHA10Q5JZY3 1008 aa12.19□□□□□ -0.46
PAX6-242ENST00000638878 SUCLG2Q96I99 432 aa12.19□□□□□ -0.46
PAX6-242ENST00000638878 EYA3Q99504 573 aa12.19□□□□□ -0.46
PAX6-242ENST00000638878 MPHOSPH8Q99549 860 aa12.19□□□□□ -0.46
PAX6-242ENST00000638878 ANKRD2Q9GZV1 360 aa12.19□□□□□ -0.46
PAX6-242ENST00000638878 GPBP1L1Q9HC44 474 aaPredicted RBP12.19□□□□□ -0.46
PAX6-242ENST00000638878 ZNF277Q9NRM2 450 aaPredicted RBP12.19□□□□□ -0.46
PAX6-242ENST00000638878 NSFL1CQ9UNZ2 370 aaKnown RBP12.19□□□□□ -0.46
PAX6-242ENST00000638878 MYH3P11055 1940 aa12.19□□□□□ -0.46
PAX6-242ENST00000638878 XDHP47989 1333 aa12.19□□□□□ -0.46
PAX6-242ENST00000638878 DICER1Q9UPY3 1922 aaKnown RBP12.19□□□□□ -0.46
PAX6-242ENST00000638878 UBTFL1P0CB47 393 aaPredicted RBP12.18□□□□□ -0.46
PAX6-242ENST00000638878 ATP2B4P23634 1241 aa12.18□□□□□ -0.46
PAX6-242ENST00000638878 WASHC4Q2M389 1173 aa12.18□□□□□ -0.46
PAX6-242ENST00000638878 DZIP1LQ8IYY4 767 aaKnown RBP12.18□□□□□ -0.46
PAX6-242ENST00000638878 TBC1D16Q8TBP0 767 aa12.18□□□□□ -0.46
PAX6-242ENST00000638878 BICC1Q9H694 974 aaKnown RBP12.18□□□□□ -0.46
PAX6-242ENST00000638878 POLLQ9UGP5 575 aa12.18□□□□□ -0.46
PAX6-242ENST00000638878 BRPF3Q9ULD4 1205 aa12.18□□□□□ -0.46
PAX6-242ENST00000638878 LEMD3Q9Y2U8 911 aa12.18□□□□□ -0.46
PAX6-242ENST00000638878 GPSM2P81274 684 aa12.18□□□□□ -0.46
PAX6-242ENST00000638878 MTX1Q13505 466 aa12.18□□□□□ -0.46
PAX6-242ENST00000638878 LARGE2Q8N3Y3 721 aa12.18□□□□□ -0.46
PAX6-242ENST00000638878 ANKRD44Q8N8A2 993 aa12.18□□□□□ -0.46
PAX6-242ENST00000638878 L3MBTL3Q96JM7 780 aaPredicted RBP12.18□□□□□ -0.46
PAX6-242ENST00000638878 ANKIB1Q9P2G1 1089 aa12.18□□□□□ -0.46
PAX6-242ENST00000638878 ZNRF3Q9ULT6 936 aa12.18□□□□□ -0.46
PAX6-242ENST00000638878 CACNA1SQ13698 1873 aa12.17□□□□□ -0.46
PAX6-242ENST00000638878 LDHAL6AQ6ZMR3 332 aa12.17□□□□□ -0.46
PAX6-242ENST00000638878 C15orf52Q6ZUT6 534 aaKnown RBP12.17□□□□□ -0.46
PAX6-242ENST00000638878 GPC2Q8N158 579 aa12.17□□□□□ -0.46
PAX6-242ENST00000638878 TBC1D32Q96NH3 1257 aa12.17□□□□□ -0.46
PAX6-242ENST00000638878 CCDC85AQ96PX6 553 aaPredicted RBP12.17□□□□□ -0.46
PAX6-242ENST00000638878 ZC3H12CQ9C0D7 883 aaKnown RBP12.17□□□□□ -0.46
PAX6-242ENST00000638878 GGA1Q9UJY5 639 aa12.17□□□□□ -0.46
PAX6-242ENST00000638878 RIPOR2Q9Y4F9 1068 aa12.17□□□□□ -0.46
PAX6-242ENST00000638878 LTBP1Q14766 1721 aa12.16□□□□□ -0.46
PAX6-242ENST00000638878 TAF1P21675 1872 aa12.16□□□□□ -0.46
PAX6-242ENST00000638878 ZBTB7BO15156 539 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms