RNA–Protein interactions for RNA: ENST00000638685.1

PAX6-236, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-236ENST00000638685 NOL8Q76FK4 1167 aaKnown RBP12.37□□□□□ -0.43
PAX6-236ENST00000638685 ANP32BQ92688 251 aaKnown RBP12.37□□□□□ -0.43
PAX6-236ENST00000638685 TAF6LQ9Y6J9 622 aa12.37□□□□□ -0.43
PAX6-236ENST00000638685 HIP1O00291 1037 aa12.37□□□□□ -0.43
PAX6-236ENST00000638685 BRD1O95696 1058 aa12.37□□□□□ -0.43
PAX6-236ENST00000638685 GAS2L3Q86XJ1 694 aa12.37□□□□□ -0.43
PAX6-236ENST00000638685 SMARCC1Q92922 1105 aaPredicted RBP12.37□□□□□ -0.43
PAX6-236ENST00000638685 HAUS7Q99871 368 aa12.37□□□□□ -0.43
PAX6-236ENST00000638685 GPR108Q9NPR9 543 aa12.37□□□□□ -0.43
PAX6-236ENST00000638685 RIPOR2Q9Y4F9 1068 aa12.37□□□□□ -0.43
PAX6-236ENST00000638685 BCORQ6W2J9 1755 aa12.37□□□□□ -0.43
PAX6-236ENST00000638685 MYO5AQ9Y4I1 1855 aaKnown RBP12.36□□□□□ -0.43
PAX6-236ENST00000638685 ADCK5Q3MIX3 580 aa12.36□□□□□ -0.43
PAX6-236ENST00000638685 SNAP23O00161 211 aa12.36□□□□□ -0.43
PAX6-236ENST00000638685 PDE8AO60658 829 aa12.36□□□□□ -0.43
PAX6-236ENST00000638685 PRPF40AO75400 957 aaKnown RBP12.36□□□□□ -0.43
PAX6-236ENST00000638685 NCLP19338 710 aaKnown RBP12.36□□□□□ -0.43
PAX6-236ENST00000638685 SCARF1Q14162 830 aa12.36□□□□□ -0.43
PAX6-236ENST00000638685 CCDC129Q6ZRS4 1044 aa12.36□□□□□ -0.43
PAX6-236ENST00000638685 CEP126Q9P2H0 1117 aa12.36□□□□□ -0.43
PAX6-236ENST00000638685 NIP7Q9Y221 180 aaKnown RBP eCLIP12.36□□□□□ -0.43
PAX6-236ENST00000638685 SPEF2Q9C093 1822 aa12.36□□□□□ -0.43
PAX6-236ENST00000638685 ZNF831Q5JPB2 1677 aa12.36□□□□□ -0.43
PAX6-236ENST00000638685 NHSQ6T4R5 1651 aa12.36□□□□□ -0.43
PAX6-236ENST00000638685 CCDC171Q6TFL3 1326 aa12.36□□□□□ -0.43
PAX6-236ENST00000638685 MED23Q9ULK4 1368 aa12.36□□□□□ -0.43
PAX6-236ENST00000638685 GOLIM4O00461 696 aa12.35□□□□□ -0.43
PAX6-236ENST00000638685 NTSR2O95665 410 aa12.35□□□□□ -0.43
PAX6-236ENST00000638685 MBD3O95983 291 aa12.35□□□□□ -0.43
PAX6-236ENST00000638685 TAF7LQ5H9L4 462 aa12.35□□□□□ -0.43
PAX6-236ENST00000638685 PRPF40BQ6NWY9 871 aaKnown RBP12.35□□□□□ -0.43
PAX6-236ENST00000638685 PI16Q6UXB8 463 aa12.35□□□□□ -0.43
PAX6-236ENST00000638685 LDHAL6AQ6ZMR3 332 aa12.35□□□□□ -0.43
PAX6-236ENST00000638685 LARP6Q9BRS8 491 aaKnown RBP12.35□□□□□ -0.43
PAX6-236ENST00000638685 SEC31BQ9NQW1 1179 aa12.35□□□□□ -0.43
PAX6-236ENST00000638685 AKAP11Q9UKA4 1901 aa12.35□□□□□ -0.43
PAX6-236ENST00000638685 CASZ1Q86V15 1759 aa12.35□□□□□ -0.43
PAX6-236ENST00000638685 XAGE2Q96GT9 111 aa12.35□□□□□ -0.43
PAX6-236ENST00000638685 SNRKQ9NRH2 765 aa12.35□□□□□ -0.43
PAX6-236ENST00000638685 TAF1LQ8IZX4 1826 aa12.35□□□□□ -0.43
PAX6-236ENST00000638685 NECTIN1Q15223 517 aa12.34□□□□□ -0.43
PAX6-236ENST00000638685 CAVIN1Q6NZI2 390 aaKnown RBP12.34□□□□□ -0.43
PAX6-236ENST00000638685 VGLL2Q8N8G2 317 aa12.34□□□□□ -0.43
PAX6-236ENST00000638685 HELBQ8NG08 1087 aaPredicted RBP12.34□□□□□ -0.43
PAX6-236ENST00000638685 MAP4K1Q92918 833 aa12.34□□□□□ -0.43
PAX6-236ENST00000638685 TRIM44Q96DX7 344 aaPredicted RBP12.34□□□□□ -0.43
PAX6-236ENST00000638685 BCL2L12Q9HB09 334 aa12.34□□□□□ -0.43
PAX6-236ENST00000638685 SH3TC1Q8TE82 1336 aa12.34□□□□□ -0.43
PAX6-236ENST00000638685 WDR33Q9C0J8 1336 aaKnown RBP12.34□□□□□ -0.43
PAX6-236ENST00000638685 NASPP49321 788 aaPredicted RBP12.34□□□□□ -0.43
PAX6-236ENST00000638685 ZSCAN23Q3MJ62 389 aa12.34□□□□□ -0.43
PAX6-236ENST00000638685 C3orf67Q6ZVT6 689 aa12.34□□□□□ -0.43
PAX6-236ENST00000638685 SRP68Q9UHB9 627 aaKnown RBP12.34□□□□□ -0.43
PAX6-236ENST00000638685 LIMCH1Q9UPQ0 1083 aa12.34□□□□□ -0.43
PAX6-236ENST00000638685 RBM8AQ9Y5S9 174 aaKnown RBP12.34□□□□□ -0.43
PAX6-236ENST00000638685 ANKRD18BA2A2Z9 1011 aa12.33□□□□□ -0.44
PAX6-236ENST00000638685 DTNBO60941 627 aa12.33□□□□□ -0.44
PAX6-236ENST00000638685 CCDC173Q0VFZ6 552 aa12.33□□□□□ -0.44
PAX6-236ENST00000638685 METTL24Q5JXM2 366 aa12.33□□□□□ -0.44
PAX6-236ENST00000638685 SEPT12Q8IYM1 358 aa12.33□□□□□ -0.44
PAX6-236ENST00000638685 KBTBD3Q8NAB2 608 aa12.33□□□□□ -0.44
PAX6-236ENST00000638685 TTC14Q96N46 770 aa12.33□□□□□ -0.44
PAX6-236ENST00000638685 UTP14AQ9BVJ6 771 aaKnown RBP12.33□□□□□ -0.44
PAX6-236ENST00000638685 PAG1Q9NWQ8 432 aa12.33□□□□□ -0.44
PAX6-236ENST00000638685 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.33□□□□□ -0.44
PAX6-236ENST00000638685 ATRNO75882 1429 aa12.33□□□□□ -0.44
PAX6-236ENST00000638685 IFIT1P09914 478 aaKnown RBP12.33□□□□□ -0.44
PAX6-236ENST00000638685 BICDL1Q6ZP65 573 aa12.33□□□□□ -0.44
PAX6-236ENST00000638685 TM6SF1Q9BZW5 370 aa12.33□□□□□ -0.44
PAX6-236ENST00000638685 LY75O60449 1722 aa12.32□□□□□ -0.44
PAX6-236ENST00000638685 ONECUT3O60422 494 aaPredicted RBP12.32□□□□□ -0.44
PAX6-236ENST00000638685 LRP5O75197 1615 aa12.32□□□□□ -0.44
PAX6-236ENST00000638685 TAF5LO75529 589 aa12.32□□□□□ -0.44
PAX6-236ENST00000638685 ZKSCAN1P17029 563 aaPredicted RBP12.32□□□□□ -0.44
PAX6-236ENST00000638685 CREB3L3Q68CJ9 461 aa12.32□□□□□ -0.44
PAX6-236ENST00000638685 CNNM1Q9NRU3 951 aa12.32□□□□□ -0.44
PAX6-236ENST00000638685 FBXO3Q9UK99 471 aa12.32□□□□□ -0.44
PAX6-236ENST00000638685 BRWD3Q6RI45 1802 aa12.32□□□□□ -0.44
PAX6-236ENST00000638685 CNTNAP4Q9C0A0 1308 aa12.32□□□□□ -0.44
PAX6-236ENST00000638685 TBC1D9BQ66K14 1250 aa12.32□□□□□ -0.44
PAX6-236ENST00000638685 KCNB2Q92953 911 aa12.32□□□□□ -0.44
PAX6-236ENST00000638685 CASTP20810 708 aaKnown RBP12.31□□□□□ -0.44
PAX6-236ENST00000638685 FKBP4Q02790 459 aaKnown RBP eCLIP12.31□□□□□ -0.44
PAX6-236ENST00000638685 ATP2B3Q16720 1220 aa12.31□□□□□ -0.44
PAX6-236ENST00000638685 VPS53Q5VIR6 699 aa12.31□□□□□ -0.44
PAX6-236ENST00000638685 USPL1Q5W0Q7 1092 aa12.31□□□□□ -0.44
PAX6-236ENST00000638685 GPT2Q8TD30 523 aa12.31□□□□□ -0.44
PAX6-236ENST00000638685 SYAP1Q96A49 352 aaPredicted RBP12.31□□□□□ -0.44
PAX6-236ENST00000638685 ZSCAN31Q96LW9 406 aaPredicted RBP12.31□□□□□ -0.44
PAX6-236ENST00000638685 RRAGDQ9NQL2 400 aaPredicted RBP12.31□□□□□ -0.44
PAX6-236ENST00000638685 LRRC4BQ9NT99 713 aa12.31□□□□□ -0.44
PAX6-236ENST00000638685 CCNL1Q9UK58 526 aaPredicted RBP12.31□□□□□ -0.44
PAX6-236ENST00000638685 LAMB2P55268 1798 aa12.31□□□□□ -0.44
PAX6-236ENST00000638685 A0A0G2JLW4 131 aa12.3□□□□□ -0.44
PAX6-236ENST00000638685 SLC27A2O14975 620 aa12.3□□□□□ -0.44
PAX6-236ENST00000638685 GNPATO15228 680 aa12.3□□□□□ -0.44
PAX6-236ENST00000638685 CLCN1P35523 988 aa12.3□□□□□ -0.44
PAX6-236ENST00000638685 ZAP70P43403 619 aa12.3□□□□□ -0.44
PAX6-236ENST00000638685 AK2P54819 239 aa12.3□□□□□ -0.44
PAX6-236ENST00000638685 ERFEQ4G0M1 354 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms