RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-231	ENST00000637786	KLHDC4	Q8TBB5	520 aa		27.83	■■■□□ 2.05
CHRNA7-231	ENST00000637786	CNNM1	Q9NRU3	951 aa		27.83	■■■□□ 2.05
CHRNA7-231	ENST00000637786	ZNF219	Q9P2Y4	722 aa	Predicted RBP	27.83	■■■□□ 2.05
CHRNA7-231	ENST00000637786	MINPP1	Q9UNW1	487 aa		27.83	■■■□□ 2.05
CHRNA7-231	ENST00000637786	LTBP1	Q14766	1721 aa		27.83	■■■□□ 2.05
CHRNA7-231	ENST00000637786	GOLGB1	Q14789	3259 aa	Known RBP	27.83	■■■□□ 2.05
CHRNA7-231	ENST00000637786		A0A1B0GUL6	1792 aa		27.82	■■■□□ 2.04
CHRNA7-231	ENST00000637786	RIPOR2	Q9Y4F9	1068 aa		27.82	■■■□□ 2.04
CHRNA7-231	ENST00000637786	EYA2	O00167	538 aa		27.81	■■■□□ 2.04
CHRNA7-231	ENST00000637786	OLFM4	Q6UX06	510 aa		27.81	■■■□□ 2.04
CHRNA7-231	ENST00000637786	ANKRD2	Q9GZV1	360 aa		27.81	■■■□□ 2.04
CHRNA7-231	ENST00000637786	PODXL2	Q9NZ53	605 aa		27.81	■■■□□ 2.04
CHRNA7-231	ENST00000637786	PCDHB15	Q9Y5E8	787 aa		27.81	■■■□□ 2.04
CHRNA7-231	ENST00000637786	DCAF8L1	A6NGE4	600 aa		27.8	■■■□□ 2.04
CHRNA7-231	ENST00000637786	PUS3	Q9BZE2	481 aa	Known RBP	27.8	■■■□□ 2.04
CHRNA7-231	ENST00000637786	PA2G4	Q9UQ80	394 aa	Known RBP	27.8	■■■□□ 2.04
CHRNA7-231	ENST00000637786	MROH5	Q6ZUA9	1318 aa		27.8	■■■□□ 2.04
CHRNA7-231	ENST00000637786	LTBP3	Q9NS15	1303 aa		27.8	■■■□□ 2.04
CHRNA7-231	ENST00000637786	XDH	P47989	1333 aa		27.79	■■■□□ 2.04
CHRNA7-231	ENST00000637786	NEFL	P07196	543 aa		27.79	■■■□□ 2.04
CHRNA7-231	ENST00000637786	CHRND	Q07001	517 aa		27.79	■■■□□ 2.04
CHRNA7-231	ENST00000637786	MPND	Q8N594	471 aa		27.79	■■■□□ 2.04
CHRNA7-231	ENST00000637786	PSMD1	Q99460	953 aa		27.79	■■■□□ 2.04
CHRNA7-231	ENST00000637786	NOP58	Q9Y2X3	529 aa	Known RBP	27.79	■■■□□ 2.04
CHRNA7-231	ENST00000637786	LRRC24	Q50LG9	513 aa		27.78	■■■□□ 2.04
CHRNA7-231	ENST00000637786	ATG9A	Q7Z3C6	839 aa		27.78	■■■□□ 2.04
CHRNA7-231	ENST00000637786	SLC51A	Q86UW1	340 aa		27.78	■■■□□ 2.04
CHRNA7-231	ENST00000637786	RTFDC1	Q9BY42	306 aa	Predicted RBP	27.78	■■■□□ 2.04
CHRNA7-231	ENST00000637786	IL15	P40933	162 aa	Predicted RBP	27.77	■■■□□ 2.04
CHRNA7-231	ENST00000637786	GPSM2	P81274	684 aa		27.77	■■■□□ 2.04
CHRNA7-231	ENST00000637786	DPP8	Q6V1X1	898 aa	Predicted RBP	27.77	■■■□□ 2.04
CHRNA7-231	ENST00000637786	SIL1	Q9H173	461 aa		27.77	■■■□□ 2.04
CHRNA7-231	ENST00000637786	ANKIB1	Q9P2G1	1089 aa		27.77	■■■□□ 2.04
CHRNA7-231	ENST00000637786	NSFL1C	Q9UNZ2	370 aa	Known RBP	27.77	■■■□□ 2.04
CHRNA7-231	ENST00000637786	FKBP4	Q02790	459 aa	Known RBP eCLIP	27.76	■■■□□ 2.03
CHRNA7-231	ENST00000637786	ARHGAP27	Q6ZUM4	889 aa		27.76	■■■□□ 2.03
CHRNA7-231	ENST00000637786	TAOK3	Q9H2K8	898 aa		27.76	■■■□□ 2.03
CHRNA7-231	ENST00000637786	DUOX1	Q9NRD9	1551 aa		27.76	■■■□□ 2.03
CHRNA7-231	ENST00000637786	NFKBIE	O00221	500 aa		27.75	■■■□□ 2.03
CHRNA7-231	ENST00000637786	SURF6	O75683	361 aa	Known RBP	27.75	■■■□□ 2.03
CHRNA7-231	ENST00000637786	G3BP1	Q13283	466 aa	Known RBP eCLIP	27.75	■■■□□ 2.03
CHRNA7-231	ENST00000637786	SUPT20H	Q8NEM7	779 aa		27.75	■■■□□ 2.03
CHRNA7-231	ENST00000637786	ATP2B4	P23634	1241 aa		27.74	■■■□□ 2.03
CHRNA7-231	ENST00000637786	HSP90AB4P	Q58FF6	505 aa		27.74	■■■□□ 2.03
CHRNA7-231	ENST00000637786	METTL24	Q5JXM2	366 aa		27.74	■■■□□ 2.03
CHRNA7-231	ENST00000637786	GGA1	Q9UJY5	639 aa		27.74	■■■□□ 2.03
CHRNA7-231	ENST00000637786	LEMD3	Q9Y2U8	911 aa		27.74	■■■□□ 2.03
CHRNA7-231	ENST00000637786	VGLL2	Q8N8G2	317 aa		27.73	■■■□□ 2.03
CHRNA7-231	ENST00000637786	VPS33B	Q9H267	617 aa		27.73	■■■□□ 2.03
CHRNA7-231	ENST00000637786	SBF1	O95248	1867 aa		27.72	■■■□□ 2.03
CHRNA7-231	ENST00000637786	PDE8B	O95263	885 aa		27.72	■■■□□ 2.03
CHRNA7-231	ENST00000637786	HDAC1	Q13547	482 aa	Predicted RBP	27.72	■■■□□ 2.03
CHRNA7-231	ENST00000637786	TBC1D16	Q8TBP0	767 aa		27.72	■■■□□ 2.03
CHRNA7-231	ENST00000637786	CEP126	Q9P2H0	1117 aa		27.72	■■■□□ 2.03
CHRNA7-231	ENST00000637786	UFL1	O94874	794 aa		27.71	■■■□□ 2.03
CHRNA7-231	ENST00000637786	POLL	Q9UGP5	575 aa		27.71	■■■□□ 2.03
CHRNA7-231	ENST00000637786	UBE4A	Q14139	1066 aa		27.7	■■■□□ 2.02
CHRNA7-231	ENST00000637786	ERC1	Q8IUD2	1116 aa		27.7	■■■□□ 2.02
CHRNA7-231	ENST00000637786	HELB	Q8NG08	1087 aa	Predicted RBP	27.7	■■■□□ 2.02
CHRNA7-231	ENST00000637786	EYA3	Q99504	573 aa		27.7	■■■□□ 2.02
CHRNA7-231	ENST00000637786	CCDC88A	Q3V6T2	1871 aa		27.7	■■■□□ 2.02
CHRNA7-231	ENST00000637786	ZNF804B	A4D1E1	1349 aa		27.69	■■■□□ 2.02
CHRNA7-231	ENST00000637786	C6orf229	H3BNL8	230 aa		27.69	■■■□□ 2.02
CHRNA7-231	ENST00000637786	TAF5L	O75529	589 aa		27.69	■■■□□ 2.02
CHRNA7-231	ENST00000637786	OS9	Q13438	667 aa	Predicted RBP	27.69	■■■□□ 2.02
CHRNA7-231	ENST00000637786	DCTPP1	Q9H773	170 aa		27.69	■■■□□ 2.02
CHRNA7-231	ENST00000637786	EXOC6B	Q9Y2D4	811 aa		27.69	■■■□□ 2.02
CHRNA7-231	ENST00000637786	RAB11FIP3	O75154	756 aa		27.68	■■■□□ 2.02
CHRNA7-231	ENST00000637786	KCNJ4	P48050	445 aa		27.68	■■■□□ 2.02
CHRNA7-231	ENST00000637786	RASSF7	Q02833	373 aa		27.68	■■■□□ 2.02
CHRNA7-231	ENST00000637786	DICER1	Q9UPY3	1922 aa	Known RBP	27.68	■■■□□ 2.02
CHRNA7-231	ENST00000637786	SASH1	O94885	1247 aa		27.67	■■■□□ 2.02
CHRNA7-231	ENST00000637786	PUM3	Q15397	648 aa	Known RBP	27.67	■■■□□ 2.02
CHRNA7-231	ENST00000637786	ERICH6B	Q5W0A0	696 aa		27.67	■■■□□ 2.02
CHRNA7-231	ENST00000637786	C15orf52	Q6ZUT6	534 aa	Known RBP	27.67	■■■□□ 2.02
CHRNA7-231	ENST00000637786	RWDD1	Q9H446	243 aa	Predicted RBP	27.67	■■■□□ 2.02
CHRNA7-231	ENST00000637786	MED23	Q9ULK4	1368 aa		27.66	■■■□□ 2.02
CHRNA7-231	ENST00000637786	LMNB1	P20700	586 aa		27.66	■■■□□ 2.02
CHRNA7-231	ENST00000637786	FGFR2	P21802	821 aa		27.65	■■■□□ 2.02
CHRNA7-231	ENST00000637786	IARS	P41252	1262 aa	Known RBP	27.65	■■■□□ 2.02
CHRNA7-231	ENST00000637786	KIAA2012	Q0VF49	1180 aa		27.65	■■■□□ 2.02
CHRNA7-231	ENST00000637786	TFCP2	Q12800	502 aa		27.65	■■■□□ 2.02
CHRNA7-231	ENST00000637786	WASHC4	Q2M389	1173 aa		27.65	■■■□□ 2.02
CHRNA7-231	ENST00000637786	GPR108	Q9NPR9	543 aa		27.65	■■■□□ 2.02
CHRNA7-231	ENST00000637786	ZNF277	Q9NRM2	450 aa	Predicted RBP	27.65	■■■□□ 2.02
CHRNA7-231	ENST00000637786	AKAP2	Q9Y2D5	859 aa		27.65	■■■□□ 2.02
CHRNA7-231	ENST00000637786	KIF1BP	Q96EK5	621 aa		27.64	■■■□□ 2.02
CHRNA7-231	ENST00000637786	ZC3H12C	Q9C0D7	883 aa	Known RBP	27.64	■■■□□ 2.02
CHRNA7-231	ENST00000637786	CHD4	Q14839	1912 aa		27.64	■■■□□ 2.02
CHRNA7-231	ENST00000637786	IRS2	Q9Y4H2	1338 aa		27.64	■■■□□ 2.01
CHRNA7-231	ENST00000637786	ATP2B3	Q16720	1220 aa		27.63	■■■□□ 2.01
CHRNA7-231	ENST00000637786	LPIN2	Q92539	896 aa		27.63	■■■□□ 2.01
CHRNA7-231	ENST00000637786	ARAP2	Q8WZ64	1704 aa		27.63	■■■□□ 2.01
CHRNA7-231	ENST00000637786	WTIP	A6NIX2	430 aa	Predicted RBP	27.62	■■■□□ 2.01
CHRNA7-231	ENST00000637786	SNAP23	O00161	211 aa		27.62	■■■□□ 2.01
CHRNA7-231	ENST00000637786	PPIP5K2	O43314	1243 aa		27.62	■■■□□ 2.01
CHRNA7-231	ENST00000637786	IFIT1	P09914	478 aa	Known RBP	27.62	■■■□□ 2.01
CHRNA7-231	ENST00000637786	PRELP	P51888	382 aa		27.62	■■■□□ 2.01
CHRNA7-231	ENST00000637786	RHPN1	Q8TCX5	695 aa		27.62	■■■□□ 2.01
CHRNA7-231	ENST00000637786	GCC1	Q96CN9	775 aa		27.62	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms