RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 GPC2Q8N158 579 aa18.15■□□□□ 0.5
CACNA1A-249ENST00000637777 TBC1D16Q8TBP0 767 aa18.15■□□□□ 0.5
CACNA1A-249ENST00000637777 RBM46Q8TBY0 533 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-249ENST00000637777 ZC3H12CQ9C0D7 883 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-249ENST00000637777 BSDC1Q9NW68 430 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-249ENST00000637777 POLLQ9UGP5 575 aa18.15■□□□□ 0.5
CACNA1A-249ENST00000637777 ZNRF3Q9ULT6 936 aa18.15■□□□□ 0.5
CACNA1A-249ENST00000637777 DUOX1Q9NRD9 1551 aa18.15■□□□□ 0.5
CACNA1A-249ENST00000637777 KCNJ4P48050 445 aa18.14■□□□□ 0.49
CACNA1A-249ENST00000637777 SUCLG2Q96I99 432 aa18.14■□□□□ 0.49
CACNA1A-249ENST00000637777 DBNDD1Q9H9R9 158 aa18.14■□□□□ 0.49
CACNA1A-249ENST00000637777 HACL1Q9UJ83 578 aa18.14■□□□□ 0.49
CACNA1A-249ENST00000637777 SCN4AP35499 1836 aa18.14■□□□□ 0.49
CACNA1A-249ENST00000637777 RAD17O75943 681 aa18.13■□□□□ 0.49
CACNA1A-249ENST00000637777 CSF1RP07333 972 aa18.13■□□□□ 0.49
CACNA1A-249ENST00000637777 NBPF7P0C2Y1 421 aaPredicted RBP18.13■□□□□ 0.49
CACNA1A-249ENST00000637777 CCT4P50991 539 aaKnown RBP18.13■□□□□ 0.49
CACNA1A-249ENST00000637777 FOXO4P98177 505 aa18.13■□□□□ 0.49
CACNA1A-249ENST00000637777 DOK7Q18PE1 504 aa18.13■□□□□ 0.49
CACNA1A-249ENST00000637777 CIAPIN1Q6FI81 312 aa18.13■□□□□ 0.49
CACNA1A-249ENST00000637777 SMC1BQ8NDV3 1235 aa18.13■□□□□ 0.49
CACNA1A-249ENST00000637777 IPO8O15397 1037 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-249ENST00000637777 ECE2O60344 883 aa18.12■□□□□ 0.49
CACNA1A-249ENST00000637777 ATP2B4P23634 1241 aa18.12■□□□□ 0.49
CACNA1A-249ENST00000637777 TNIP1Q15025 636 aa18.12■□□□□ 0.49
CACNA1A-249ENST00000637777 EPHA10Q5JZY3 1008 aa18.12■□□□□ 0.49
CACNA1A-249ENST00000637777 L3MBTL3Q96JM7 780 aaPredicted RBP18.12■□□□□ 0.49
CACNA1A-249ENST00000637777 CNNM1Q9NRU3 951 aa18.12■□□□□ 0.49
CACNA1A-249ENST00000637777 PODXL2Q9NZ53 605 aa18.12■□□□□ 0.49
CACNA1A-249ENST00000637777 CLEC11AQ9Y240 323 aa18.12■□□□□ 0.49
CACNA1A-249ENST00000637777 LTBP1Q14766 1721 aa18.12■□□□□ 0.49
CACNA1A-249ENST00000637777 ANKRD2Q9GZV1 360 aa18.11■□□□□ 0.49
CACNA1A-249ENST00000637777 MINPP1Q9UNW1 487 aa18.11■□□□□ 0.49
CACNA1A-249ENST00000637777 POTECB2RU33 542 aa18.1■□□□□ 0.49
CACNA1A-249ENST00000637777 BCAR3O75815 825 aa18.1■□□□□ 0.49
CACNA1A-249ENST00000637777 UBTFL1P0CB47 393 aaPredicted RBP18.1■□□□□ 0.49
CACNA1A-249ENST00000637777 EPHX2P34913 555 aa18.1■□□□□ 0.49
CACNA1A-249ENST00000637777 CXCL9Q07325 125 aa18.1■□□□□ 0.49
CACNA1A-249ENST00000637777 FSTL1Q12841 308 aa18.1■□□□□ 0.49
CACNA1A-249ENST00000637777 ZNF594Q96JF6 807 aaPredicted RBP18.1■□□□□ 0.49
CACNA1A-249ENST00000637777 TAF1DQ9H5J8 278 aaPredicted RBP18.1■□□□□ 0.49
CACNA1A-249ENST00000637777 BICC1Q9H694 974 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-249ENST00000637777 PLIN1O60240 522 aa18.09■□□□□ 0.49
CACNA1A-249ENST00000637777 HSPA6P17066 643 aa18.09■□□□□ 0.49
CACNA1A-249ENST00000637777 BRPF1P55201 1214 aaPredicted RBP18.09■□□□□ 0.49
CACNA1A-249ENST00000637777 LDHAL6AQ6ZMR3 332 aa18.09■□□□□ 0.49
CACNA1A-249ENST00000637777 FBXW7Q969H0 707 aa18.09■□□□□ 0.49
CACNA1A-249ENST00000637777 CHRNDQ07001 517 aa18.08■□□□□ 0.48
CACNA1A-249ENST00000637777 CLUAP1Q96AJ1 413 aa18.08■□□□□ 0.48
CACNA1A-249ENST00000637777 UTYO14607 1347 aa18.07■□□□□ 0.48
CACNA1A-249ENST00000637777 YDJCA8MPS7 323 aa18.07■□□□□ 0.48
CACNA1A-249ENST00000637777 GMPSP49915 693 aaPredicted RBP18.07■□□□□ 0.48
CACNA1A-249ENST00000637777 PNMA8AQ86V59 439 aaPredicted RBP18.07■□□□□ 0.48
CACNA1A-249ENST00000637777 HELBQ8NG08 1087 aaPredicted RBP18.07■□□□□ 0.48
CACNA1A-249ENST00000637777 ARHGAP45Q92619 1136 aa18.07■□□□□ 0.48
CACNA1A-249ENST00000637777 USP44Q9H0E7 712 aa18.07■□□□□ 0.48
CACNA1A-249ENST00000637777 LEMD3Q9Y2U8 911 aa18.07■□□□□ 0.48
CACNA1A-249ENST00000637777 ZNF804BA4D1E1 1349 aa18.06■□□□□ 0.48
CACNA1A-249ENST00000637777 PSMD14O00487 310 aa18.06■□□□□ 0.48
CACNA1A-249ENST00000637777 POTEIP0CG38 1075 aa18.06■□□□□ 0.48
CACNA1A-249ENST00000637777 POTEJP0CG39 1038 aa18.06■□□□□ 0.48
CACNA1A-249ENST00000637777 CHADLQ6NUI6 762 aa18.06■□□□□ 0.48
CACNA1A-249ENST00000637777 ATF7IPQ6VMQ6 1270 aa18.06■□□□□ 0.48
CACNA1A-249ENST00000637777 LDHDQ86WU2 507 aa18.06■□□□□ 0.48
CACNA1A-249ENST00000637777 FTSJ3Q8IY81 847 aaKnown RBP18.06■□□□□ 0.48
CACNA1A-249ENST00000637777 HDAC5Q9UQL6 1122 aa18.06■□□□□ 0.48
CACNA1A-249ENST00000637777 MED23Q9ULK4 1368 aa18.05■□□□□ 0.48
CACNA1A-249ENST00000637777 TAF5LO75529 589 aa18.05■□□□□ 0.48
CACNA1A-249ENST00000637777 EPS15P42566 896 aa18.05■□□□□ 0.48
CACNA1A-249ENST00000637777 SCNN1DP51172 638 aa18.05■□□□□ 0.48
CACNA1A-249ENST00000637777 ZKSCAN2Q63HK3 967 aa18.05■□□□□ 0.48
CACNA1A-249ENST00000637777 TRIM27P14373 513 aa18.04■□□□□ 0.48
CACNA1A-249ENST00000637777 KAZALD1Q96I82 304 aa18.04■□□□□ 0.48
CACNA1A-249ENST00000637777 GPRC5DQ9NZD1 345 aa18.04■□□□□ 0.48
CACNA1A-249ENST00000637777 ZBTB12Q9Y330 459 aaPredicted RBP18.04■□□□□ 0.48
CACNA1A-249ENST00000637777 WTIPA6NIX2 430 aaPredicted RBP18.03■□□□□ 0.48
CACNA1A-249ENST00000637777 H7C1D1 291 aa18.03■□□□□ 0.48
CACNA1A-249ENST00000637777 APLP1P51693 650 aa18.03■□□□□ 0.48
CACNA1A-249ENST00000637777 ANKRD44Q8N8A2 993 aa18.03■□□□□ 0.48
CACNA1A-249ENST00000637777 KCNQ5Q9NR82 932 aa18.03■□□□□ 0.48
CACNA1A-249ENST00000637777 LRRFIP2Q9Y608 721 aaKnown RBP18.03■□□□□ 0.48
CACNA1A-249ENST00000637777 A0A1B0GUL6 1792 aa18.03■□□□□ 0.48
CACNA1A-249ENST00000637777 SCN9AQ15858 1988 aa18.02■□□□□ 0.48
CACNA1A-249ENST00000637777 GNAI3P08754 354 aa18.02■□□□□ 0.48
CACNA1A-249ENST00000637777 RABL6Q3YEC7 729 aaPredicted RBP18.02■□□□□ 0.48
CACNA1A-249ENST00000637777 METTL24Q5JXM2 366 aa18.02■□□□□ 0.48
CACNA1A-249ENST00000637777 MICALL2Q8IY33 904 aa18.02■□□□□ 0.48
CACNA1A-249ENST00000637777 MEIS3Q99687 375 aa18.02■□□□□ 0.48
CACNA1A-249ENST00000637777 ADARB2Q9NS39 739 aaKnown RBP18.02■□□□□ 0.48
CACNA1A-249ENST00000637777 CNOT7Q9UIV1 285 aaKnown RBP18.02■□□□□ 0.48
CACNA1A-249ENST00000637777 TNNQ9UQP3 1299 aa18.02■□□□□ 0.48
CACNA1A-249ENST00000637777 KLRK1P26718 216 aa18.01■□□□□ 0.47
CACNA1A-249ENST00000637777 INTS3Q68E01 1043 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-249ENST00000637777 USP50Q70EL3 339 aaPredicted RBP18.01■□□□□ 0.47
CACNA1A-249ENST00000637777 PODNQ7Z5L7 613 aa18.01■□□□□ 0.47
CACNA1A-249ENST00000637777 KLHDC4Q8TBB5 520 aa18.01■□□□□ 0.47
CACNA1A-249ENST00000637777 YTHDC1Q96MU7 727 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-249ENST00000637777 PUS3Q9BZE2 481 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-249ENST00000637777 COA1Q9GZY4 146 aa18.01■□□□□ 0.47
CACNA1A-249ENST00000637777 USP17L3A6NCW0 530 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms