RNA–Protein interactions for RNA: ENST00000637649.1

CHRNA7-230, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-230ENST00000637649 RTL5Q5HYW3 569 aaPredicted RBP17.06■□□□□ 0.32
CHRNA7-230ENST00000637649 PLEKHF1Q96S99 279 aa17.06■□□□□ 0.32
CHRNA7-230ENST00000637649 MAPK8IP3Q9UPT6 1336 aa17.05■□□□□ 0.32
CHRNA7-230ENST00000637649 TBC1D8O95759 1140 aa17.05■□□□□ 0.32
CHRNA7-230ENST00000637649 MOB2Q70IA6 237 aa17.05■□□□□ 0.32
CHRNA7-230ENST00000637649 SCAF8Q9UPN6 1271 aaKnown RBP17.05■□□□□ 0.32
CHRNA7-230ENST00000637649 KIAA0100Q14667 2235 aaKnown RBP17.05■□□□□ 0.32
CHRNA7-230ENST00000637649 DDX60Q8IY21 1712 aaKnown RBP17.04■□□□□ 0.32
CHRNA7-230ENST00000637649 COL4A1P02462 1669 aa17.04■□□□□ 0.32
CHRNA7-230ENST00000637649 G3V3G9 751 aa17.04■□□□□ 0.32
CHRNA7-230ENST00000637649 SCARF1Q14162 830 aa17.04■□□□□ 0.32
CHRNA7-230ENST00000637649 DCAF8Q5TAQ9 597 aa17.04■□□□□ 0.32
CHRNA7-230ENST00000637649 ANGEL2Q5VTE6 544 aaKnown RBP17.04■□□□□ 0.32
CHRNA7-230ENST00000637649 ZNF296Q8WUU4 475 aaPredicted RBP17.04■□□□□ 0.32
CHRNA7-230ENST00000637649 FAM89AQ96GI7 184 aa17.04■□□□□ 0.32
CHRNA7-230ENST00000637649 EYA3Q99504 573 aa17.04■□□□□ 0.32
CHRNA7-230ENST00000637649 CENPFP49454 3210 aa17.03■□□□□ 0.32
CHRNA7-230ENST00000637649 CEP290O15078 2479 aa17.03■□□□□ 0.32
CHRNA7-230ENST00000637649 TBC1D16Q8TBP0 767 aa17.03■□□□□ 0.32
CHRNA7-230ENST00000637649 ATP5J2-PTCD1G3V325 749 aa17.02■□□□□ 0.32
CHRNA7-230ENST00000637649 UBE2Q2LH0YL09 131 aa17.02■□□□□ 0.32
CHRNA7-230ENST00000637649 VIL1P09327 827 aaKnown RBP17.02■□□□□ 0.32
CHRNA7-230ENST00000637649 MKRN3Q13064 507 aaKnown RBP17.02■□□□□ 0.32
CHRNA7-230ENST00000637649 ZC3H12CQ9C0D7 883 aaKnown RBP17.02■□□□□ 0.32
CHRNA7-230ENST00000637649 PKN2Q16513 984 aaKnown RBP17.01■□□□□ 0.31
CHRNA7-230ENST00000637649 KRT24Q2M2I5 525 aa17.01■□□□□ 0.31
CHRNA7-230ENST00000637649 PRAMEF18Q5VWM3 479 aa17.01■□□□□ 0.31
CHRNA7-230ENST00000637649 REM2Q8IYK8 340 aaPredicted RBP17.01■□□□□ 0.31
CHRNA7-230ENST00000637649 HTTP42858 3142 aa17.01■□□□□ 0.31
CHRNA7-230ENST00000637649 UFL1O94874 794 aa17■□□□□ 0.31
CHRNA7-230ENST00000637649 TTLL12Q14166 644 aaPredicted RBP17■□□□□ 0.31
CHRNA7-230ENST00000637649 SF3B3Q15393 1217 aaKnown RBP17■□□□□ 0.31
CHRNA7-230ENST00000637649 RIPK4P57078 832 aa16.99■□□□□ 0.31
CHRNA7-230ENST00000637649 RPS8P62241 208 aaKnown RBP16.99■□□□□ 0.31
CHRNA7-230ENST00000637649 CHPF2Q9P2E5 772 aa16.99■□□□□ 0.31
CHRNA7-230ENST00000637649 ANKIB1Q9P2G1 1089 aa16.99■□□□□ 0.31
CHRNA7-230ENST00000637649 PAPPA2Q9BXP8 1791 aa16.99■□□□□ 0.31
CHRNA7-230ENST00000637649 ZNF280AP59817 542 aaPredicted RBP16.98■□□□□ 0.31
CHRNA7-230ENST00000637649 RSBN1LQ6PCB5 846 aaPredicted RBP16.98■□□□□ 0.31
CHRNA7-230ENST00000637649 GPR25O00155 361 aa16.97■□□□□ 0.31
CHRNA7-230ENST00000637649 IRS4O14654 1257 aaPredicted RBP16.97■□□□□ 0.31
CHRNA7-230ENST00000637649 FKBP1BP68106 108 aa16.97■□□□□ 0.31
CHRNA7-230ENST00000637649 PLBD2Q8NHP8 589 aa16.97■□□□□ 0.31
CHRNA7-230ENST00000637649 ISCA1Q9BUE6 129 aa16.97■□□□□ 0.31
CHRNA7-230ENST00000637649 MYOZ2Q9NPC6 264 aa16.97■□□□□ 0.31
CHRNA7-230ENST00000637649 SEC31BQ9NQW1 1179 aa16.97■□□□□ 0.31
CHRNA7-230ENST00000637649 GGA1Q9UJY5 639 aa16.97■□□□□ 0.31
CHRNA7-230ENST00000637649 USP17L8P0C7I0 530 aa16.96■□□□□ 0.31
CHRNA7-230ENST00000637649 FBXO46Q6PJ61 603 aaPredicted RBP16.96■□□□□ 0.31
CHRNA7-230ENST00000637649 ANKRD13DQ6ZTN6 518 aa16.96■□□□□ 0.31
CHRNA7-230ENST00000637649 AGBL3Q8NEM8 1001 aa16.96■□□□□ 0.31
CHRNA7-230ENST00000637649 PNNQ9H307 717 aaKnown RBP16.96■□□□□ 0.31
CHRNA7-230ENST00000637649 LAS1LQ9Y4W2 734 aaKnown RBP16.96■□□□□ 0.31
CHRNA7-230ENST00000637649 CCDC85AQ96PX6 553 aaPredicted RBP16.95■□□□□ 0.3
CHRNA7-230ENST00000637649 R3HDMLQ9H3Y0 253 aa16.95■□□□□ 0.3
CHRNA7-230ENST00000637649 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.95■□□□□ 0.3
CHRNA7-230ENST00000637649 TRIOBPQ9H2D6 2365 aa16.94■□□□□ 0.3
CHRNA7-230ENST00000637649 PRKG1Q13976 671 aa16.94■□□□□ 0.3
CHRNA7-230ENST00000637649 GCC1Q96CN9 775 aa16.94■□□□□ 0.3
CHRNA7-230ENST00000637649 PODXL2Q9NZ53 605 aa16.94■□□□□ 0.3
CHRNA7-230ENST00000637649 BRCA2P51587 3418 aa16.94■□□□□ 0.3
CHRNA7-230ENST00000637649 FKTNO75072 461 aa16.93■□□□□ 0.3
CHRNA7-230ENST00000637649 TM4SF4P48230 202 aa16.93■□□□□ 0.3
CHRNA7-230ENST00000637649 NEUROD2Q15784 382 aa16.93■□□□□ 0.3
CHRNA7-230ENST00000637649 NBPF9Q3BBW0 867 aa16.93■□□□□ 0.3
CHRNA7-230ENST00000637649 HABP4Q5JVS0 413 aaKnown RBP16.93■□□□□ 0.3
CHRNA7-230ENST00000637649 HDGFL1Q5TGJ6 251 aa16.93■□□□□ 0.3
CHRNA7-230ENST00000637649 GMLQ99445 158 aa16.93■□□□□ 0.3
CHRNA7-230ENST00000637649 MXD3Q9BW11 206 aa16.93■□□□□ 0.3
CHRNA7-230ENST00000637649 BABAM1Q9NWV8 329 aa16.93■□□□□ 0.3
CHRNA7-230ENST00000637649 PSME4Q14997 1843 aa16.93■□□□□ 0.3
CHRNA7-230ENST00000637649 PITPNM2Q9BZ72 1349 aa16.93■□□□□ 0.3
CHRNA7-230ENST00000637649 USP17L3A6NCW0 530 aa16.92■□□□□ 0.3
CHRNA7-230ENST00000637649 USP17L4A6NCW7 530 aa16.92■□□□□ 0.3
CHRNA7-230ENST00000637649 USP17L1Q7RTZ2 530 aa16.92■□□□□ 0.3
CHRNA7-230ENST00000637649 JARID2Q92833 1246 aaPredicted RBP16.92■□□□□ 0.3
CHRNA7-230ENST00000637649 FBXW7Q969H0 707 aa16.92■□□□□ 0.3
CHRNA7-230ENST00000637649 TMPOP42166 694 aaKnown RBP16.91■□□□□ 0.3
CHRNA7-230ENST00000637649 PTPN12Q05209 780 aaKnown RBP16.91■□□□□ 0.3
CHRNA7-230ENST00000637649 WTIPA6NIX2 430 aaPredicted RBP16.9■□□□□ 0.3
CHRNA7-230ENST00000637649 NF2P35240 595 aa16.9■□□□□ 0.3
CHRNA7-230ENST00000637649 LMOD3Q0VAK6 560 aa16.9■□□□□ 0.3
CHRNA7-230ENST00000637649 SREBF2Q12772 1141 aa16.9■□□□□ 0.3
CHRNA7-230ENST00000637649 POTEFA5A3E0 1075 aa16.89■□□□□ 0.29
CHRNA7-230ENST00000637649 SASH1O94885 1247 aa16.89■□□□□ 0.29
CHRNA7-230ENST00000637649 DBF4Q9UBU7 674 aaPredicted RBP16.89■□□□□ 0.29
CHRNA7-230ENST00000637649 TRIM17Q9Y577 477 aa16.89■□□□□ 0.29
CHRNA7-230ENST00000637649 ZNF609O15014 1411 aa16.88■□□□□ 0.29
CHRNA7-230ENST00000637649 CHL1O00533 1208 aa16.88■□□□□ 0.29
CHRNA7-230ENST00000637649 CCDC152Q4G0S7 254 aa16.88■□□□□ 0.29
CHRNA7-230ENST00000637649 NOM1Q5C9Z4 860 aaKnown RBP16.88■□□□□ 0.29
CHRNA7-230ENST00000637649 RIC3Q7Z5B4 369 aa16.88■□□□□ 0.29
CHRNA7-230ENST00000637649 CCDC146Q8IYE0 955 aa16.88■□□□□ 0.29
CHRNA7-230ENST00000637649 ZBTB38Q8NAP3 1195 aaPredicted RBP16.88■□□□□ 0.29
CHRNA7-230ENST00000637649 FZD1Q9UP38 647 aa16.88■□□□□ 0.29
CHRNA7-230ENST00000637649 XDHP47989 1333 aa16.88■□□□□ 0.29
CHRNA7-230ENST00000637649 TRIM28Q13263 835 aaKnown RBP16.87■□□□□ 0.29
CHRNA7-230ENST00000637649 ARMC9Q7Z3E5 817 aa16.87■□□□□ 0.29
CHRNA7-230ENST00000637649 PODNQ7Z5L7 613 aa16.87■□□□□ 0.29
CHRNA7-230ENST00000637649 ANKRD18AQ8IVF6 992 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms