RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 KCNQ5Q9NR82 932 aa23.77■■□□□ 1.4
CLN6-220ENST00000637450 CELF2O95319 508 aaKnown RBP23.76■■□□□ 1.39
CLN6-220ENST00000637450 ECE1P42892 770 aa23.76■■□□□ 1.39
CLN6-220ENST00000637450 NCBP3Q53F19 620 aaKnown RBP23.76■■□□□ 1.39
CLN6-220ENST00000637450 CAPNS2Q96L46 248 aa23.76■■□□□ 1.39
CLN6-220ENST00000637450 GPR101Q96P66 508 aaPredicted RBP23.76■■□□□ 1.39
CLN6-220ENST00000637450 ZC3H12CQ9C0D7 883 aaKnown RBP23.76■■□□□ 1.39
CLN6-220ENST00000637450 IGKV5-2P06315 115 aa23.75■■□□□ 1.39
CLN6-220ENST00000637450 CYP4F22Q6NT55 531 aa23.75■■□□□ 1.39
CLN6-220ENST00000637450 CDC37L1Q7L3B6 337 aa23.75■■□□□ 1.39
CLN6-220ENST00000637450 STK31Q9BXU1 1019 aa23.75■■□□□ 1.39
CLN6-220ENST00000637450 ANKIB1Q9P2G1 1089 aa23.75■■□□□ 1.39
CLN6-220ENST00000637450 RPS12P25398 132 aaKnown RBP23.74■■□□□ 1.39
CLN6-220ENST00000637450 PAXIP1Q6ZW49 1069 aaPredicted RBP23.74■■□□□ 1.39
CLN6-220ENST00000637450 SAPCD2Q86UD0 394 aa23.74■■□□□ 1.39
CLN6-220ENST00000637450 CCDC85AQ96PX6 553 aaPredicted RBP23.74■■□□□ 1.39
CLN6-220ENST00000637450 GGA1Q9UJY5 639 aa23.74■■□□□ 1.39
CLN6-220ENST00000637450 RTL9Q8NET4 1388 aa23.74■■□□□ 1.39
CLN6-220ENST00000637450 UFL1O94874 794 aa23.73■■□□□ 1.39
CLN6-220ENST00000637450 TWISTNBQ3B726 338 aaPredicted RBP23.73■■□□□ 1.39
CLN6-220ENST00000637450 SAMD7Q7Z3H4 446 aa23.73■■□□□ 1.39
CLN6-220ENST00000637450 IL16Q14005 1332 aa23.73■■□□□ 1.39
CLN6-220ENST00000637450 VIL1P09327 827 aaKnown RBP23.72■■□□□ 1.39
CLN6-220ENST00000637450 LBX1P52954 281 aa23.72■■□□□ 1.39
CLN6-220ENST00000637450 ANKRD18AQ8IVF6 992 aa23.72■■□□□ 1.39
CLN6-220ENST00000637450 SLC4A2P04920 1241 aa23.71■■□□□ 1.39
CLN6-220ENST00000637450 NEXNQ0ZGT2 675 aa23.71■■□□□ 1.39
CLN6-220ENST00000637450 TBC1D10BQ4KMP7 808 aaPredicted RBP23.71■■□□□ 1.39
CLN6-220ENST00000637450 G2E3Q7L622 706 aa23.71■■□□□ 1.39
CLN6-220ENST00000637450 HHIPL1Q96JK4 782 aa23.71■■□□□ 1.39
CLN6-220ENST00000637450 EGFRP00533 1210 aa23.7■■□□□ 1.38
CLN6-220ENST00000637450 HSPA8P11142 646 aaKnown RBP23.7■■□□□ 1.38
CLN6-220ENST00000637450 CTSWP56202 376 aa23.7■■□□□ 1.38
CLN6-220ENST00000637450 GRM1Q13255 1194 aa23.7■■□□□ 1.38
CLN6-220ENST00000637450 USP48Q86UV5 1035 aa23.7■■□□□ 1.38
CLN6-220ENST00000637450 TTLL11Q8NHH1 800 aa23.7■■□□□ 1.38
CLN6-220ENST00000637450 MRS2Q9HD23 443 aa23.7■■□□□ 1.38
CLN6-220ENST00000637450 NEURL1BA8MQ27 555 aa23.69■■□□□ 1.38
CLN6-220ENST00000637450 G3V3G9 751 aa23.69■■□□□ 1.38
CLN6-220ENST00000637450 CWF19L2Q2TBE0 894 aaKnown RBP23.69■■□□□ 1.38
CLN6-220ENST00000637450 DCAF8Q5TAQ9 597 aa23.69■■□□□ 1.38
CLN6-220ENST00000637450 CDC5LQ99459 802 aaKnown RBP23.69■■□□□ 1.38
CLN6-220ENST00000637450 ZNF408Q9H9D4 720 aa23.69■■□□□ 1.38
CLN6-220ENST00000637450 TRPM7Q96QT4 1865 aa23.68■■□□□ 1.38
CLN6-220ENST00000637450 XDHP47989 1333 aa23.68■■□□□ 1.38
CLN6-220ENST00000637450 H7C1W4 665 aa23.68■■□□□ 1.38
CLN6-220ENST00000637450 MAP2K2P36507 400 aa23.68■■□□□ 1.38
CLN6-220ENST00000637450 ZEB1P37275 1124 aaPredicted RBP23.68■■□□□ 1.38
CLN6-220ENST00000637450 AOC2O75106 756 aa23.67■■□□□ 1.38
CLN6-220ENST00000637450 ATP2B4P23634 1241 aa23.67■■□□□ 1.38
CLN6-220ENST00000637450 RBM26Q5T8P6 1007 aaKnown RBP23.67■■□□□ 1.38
CLN6-220ENST00000637450 DLK2Q6UY11 383 aa23.67■■□□□ 1.38
CLN6-220ENST00000637450 BSDC1Q9NW68 430 aaPredicted RBP23.67■■□□□ 1.38
CLN6-220ENST00000637450 ANP32CO43423 234 aa23.66■■□□□ 1.38
CLN6-220ENST00000637450 KRT26Q7Z3Y9 468 aa23.66■■□□□ 1.38
CLN6-220ENST00000637450 BEGAINQ9BUH8 593 aa23.66■■□□□ 1.38
CLN6-220ENST00000637450 GREM2Q9H772 168 aa23.66■■□□□ 1.38
CLN6-220ENST00000637450 FLIIQ13045 1269 aa23.65■■□□□ 1.38
CLN6-220ENST00000637450 WDR63Q8IWG1 891 aa23.65■■□□□ 1.38
CLN6-220ENST00000637450 AGBL3Q8NEM8 1001 aa23.65■■□□□ 1.38
CLN6-220ENST00000637450 DCPSQ96C86 337 aaKnown RBP23.65■■□□□ 1.38
CLN6-220ENST00000637450 MINPP1Q9UNW1 487 aa23.65■■□□□ 1.38
CLN6-220ENST00000637450 FANCIQ9NVI1 1328 aa23.64■■□□□ 1.38
CLN6-220ENST00000637450 WTIPA6NIX2 430 aaPredicted RBP23.64■■□□□ 1.37
CLN6-220ENST00000637450 VAMP4O75379 141 aa23.64■■□□□ 1.37
CLN6-220ENST00000637450 GCKRQ14397 625 aa23.64■■□□□ 1.37
CLN6-220ENST00000637450 KIF4BQ2VIQ3 1234 aa23.64■■□□□ 1.37
CLN6-220ENST00000637450 RSBN1LQ6PCB5 846 aaPredicted RBP23.64■■□□□ 1.37
CLN6-220ENST00000637450 UBE3BQ7Z3V4 1068 aa23.64■■□□□ 1.37
CLN6-220ENST00000637450 ZNF316A6NFI3 1004 aaPredicted RBP23.63■■□□□ 1.37
CLN6-220ENST00000637450 PODNQ7Z5L7 613 aa23.63■■□□□ 1.37
CLN6-220ENST00000637450 PLA2G12BQ9BX93 195 aa23.63■■□□□ 1.37
CLN6-220ENST00000637450 SALL2Q9Y467 1007 aaPredicted RBP23.63■■□□□ 1.37
CLN6-220ENST00000637450 THSD7BQ9C0I4 1608 aa23.62■■□□□ 1.37
CLN6-220ENST00000637450 ZNF280AP59817 542 aaPredicted RBP23.62■■□□□ 1.37
CLN6-220ENST00000637450 GMLQ99445 158 aa23.62■■□□□ 1.37
CLN6-220ENST00000637450 ADM5C9JUS6 153 aa23.61■■□□□ 1.37
CLN6-220ENST00000637450 CASP7P55210 303 aa23.61■■□□□ 1.37
CLN6-220ENST00000637450 HUNKP57058 714 aa23.61■■□□□ 1.37
CLN6-220ENST00000637450 FKBP5Q13451 457 aaPredicted RBP23.61■■□□□ 1.37
CLN6-220ENST00000637450 DNAAF4Q8WXU2 420 aa23.61■■□□□ 1.37
CLN6-220ENST00000637450 SCN9AQ15858 1988 aa23.61■■□□□ 1.37
CLN6-220ENST00000637450 ZNF609O15014 1411 aa23.6■■□□□ 1.37
CLN6-220ENST00000637450 USP17L3A6NCW0 530 aa23.6■■□□□ 1.37
CLN6-220ENST00000637450 USP17L4A6NCW7 530 aa23.6■■□□□ 1.37
CLN6-220ENST00000637450 USP17L1Q7RTZ2 530 aa23.6■■□□□ 1.37
CLN6-220ENST00000637450 LINS1Q8NG48 757 aa23.6■■□□□ 1.37
CLN6-220ENST00000637450 CSF1RP07333 972 aa23.59■■□□□ 1.37
CLN6-220ENST00000637450 IGHMBP2P38935 993 aaKnown RBP23.59■■□□□ 1.37
CLN6-220ENST00000637450 CCT4P50991 539 aaKnown RBP23.59■■□□□ 1.37
CLN6-220ENST00000637450 BRPF1P55201 1214 aaPredicted RBP23.59■■□□□ 1.37
CLN6-220ENST00000637450 EXOSC9Q06265 439 aaKnown RBP23.59■■□□□ 1.37
CLN6-220ENST00000637450 MYH16Q9H6N6 1097 aa23.59■■□□□ 1.37
CLN6-220ENST00000637450 GBA2Q9HCG7 927 aaPredicted RBP23.59■■□□□ 1.37
CLN6-220ENST00000637450 GGA3Q9NZ52 723 aa23.59■■□□□ 1.37
CLN6-220ENST00000637450 MED23Q9ULK4 1368 aa23.59■■□□□ 1.37
CLN6-220ENST00000637450 ASTN2O75129 1339 aaPredicted RBP23.59■■□□□ 1.37
CLN6-220ENST00000637450 USP17L8P0C7I0 530 aa23.58■■□□□ 1.37
CLN6-220ENST00000637450 SCARF1Q14162 830 aa23.58■■□□□ 1.37
CLN6-220ENST00000637450 SULF1Q8IWU6 871 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms