RNA–Protein interactions for RNA: ENST00000636999.1

CACNA1D-220, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,212 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-220ENST00000636999 ZNF213O14771 459 aa9.03□□□□□ -0.96
CACNA1D-220ENST00000636999 PCCAP05165 728 aaPredicted RBP9.03□□□□□ -0.96
CACNA1D-220ENST00000636999 HMGB1P09429 215 aaKnown RBP9.03□□□□□ -0.96
CACNA1D-220ENST00000636999 ITSN1Q15811 1721 aa9.03□□□□□ -0.96
CACNA1D-220ENST00000636999 ZNF804AQ7Z570 1209 aa9.03□□□□□ -0.96
CACNA1D-220ENST00000636999 TRIM22Q8IYM9 498 aa9.03□□□□□ -0.96
CACNA1D-220ENST00000636999 ZBTB38Q8NAP3 1195 aaPredicted RBP9.03□□□□□ -0.96
CACNA1D-220ENST00000636999 ESYT1Q9BSJ8 1104 aa9.03□□□□□ -0.96
CACNA1D-220ENST00000636999 PNMA6EA0A0J9YXQ4 647 aa9.03□□□□□ -0.96
CACNA1D-220ENST00000636999 CCDC192P0DO97 292 aa9.03□□□□□ -0.96
CACNA1D-220ENST00000636999 ATP2B2Q01814 1243 aa9.03□□□□□ -0.96
CACNA1D-220ENST00000636999 RNF41Q9H4P4 317 aaPredicted RBP9.03□□□□□ -0.96
CACNA1D-220ENST00000636999 CPDO75976 1380 aa9.02□□□□□ -0.96
CACNA1D-220ENST00000636999 PRAMEF22A3QJZ6 481 aa9.02□□□□□ -0.96
CACNA1D-220ENST00000636999 SAMD1Q6SPF0 538 aaPredicted RBP9.02□□□□□ -0.96
CACNA1D-220ENST00000636999 PALLDQ8WX93 1383 aa9.02□□□□□ -0.97
CACNA1D-220ENST00000636999 CLCN1P35523 988 aa9.02□□□□□ -0.97
CACNA1D-220ENST00000636999 GSTO1P78417 241 aa9.02□□□□□ -0.97
CACNA1D-220ENST00000636999 DDX11Q96FC9 970 aa9.02□□□□□ -0.97
CACNA1D-220ENST00000636999 EYA3Q99504 573 aa9.02□□□□□ -0.97
CACNA1D-220ENST00000636999 TNMDQ9H2S6 317 aa9.02□□□□□ -0.97
CACNA1D-220ENST00000636999 LIMCH1Q9UPQ0 1083 aa9.02□□□□□ -0.97
CACNA1D-220ENST00000636999 UQCRHLA0A096LP55 91 aa9.02□□□□□ -0.97
CACNA1D-220ENST00000636999 UQCRHP07919 91 aa9.02□□□□□ -0.97
CACNA1D-220ENST00000636999 CAMK4Q16566 473 aa9.02□□□□□ -0.97
CACNA1D-220ENST00000636999 SSH3Q8TE77 659 aa9.02□□□□□ -0.97
CACNA1D-220ENST00000636999 MKNK2Q9HBH9 465 aa9.02□□□□□ -0.97
CACNA1D-220ENST00000636999 PAG1Q9NWQ8 432 aa9.02□□□□□ -0.97
CACNA1D-220ENST00000636999 USP25Q9UHP3 1055 aa9.02□□□□□ -0.97
CACNA1D-220ENST00000636999 IQSEC3Q9UPP2 1182 aaPredicted RBP9.02□□□□□ -0.97
CACNA1D-220ENST00000636999 A0A1B0GUL7 405 aa9.01□□□□□ -0.97
CACNA1D-220ENST00000636999 NLGN1Q8N2Q7 840 aa9.01□□□□□ -0.97
CACNA1D-220ENST00000636999 CDKL5O76039 1030 aa9.01□□□□□ -0.97
CACNA1D-220ENST00000636999 TIMM10P62072 90 aa9.01□□□□□ -0.97
CACNA1D-220ENST00000636999 PUM3Q15397 648 aaKnown RBP9.01□□□□□ -0.97
CACNA1D-220ENST00000636999 KLHDC4Q8TBB5 520 aa9.01□□□□□ -0.97
CACNA1D-220ENST00000636999 ERVV-1B6SEH8 477 aa9.01□□□□□ -0.97
CACNA1D-220ENST00000636999 PDIA4P13667 645 aaKnown RBP9.01□□□□□ -0.97
CACNA1D-220ENST00000636999 TNNI3KQ59H18 835 aa9.01□□□□□ -0.97
CACNA1D-220ENST00000636999 CRACR2BQ8N4Y2 399 aaPredicted RBP9.01□□□□□ -0.97
CACNA1D-220ENST00000636999 SPATA32Q96LK8 384 aa9.01□□□□□ -0.97
CACNA1D-220ENST00000636999 ATG3Q9NT62 314 aa9.01□□□□□ -0.97
CACNA1D-220ENST00000636999 HMG20BQ9P0W2 317 aa9.01□□□□□ -0.97
CACNA1D-220ENST00000636999 FPGT-TNNI3KV9GXZ4 949 aa9.01□□□□□ -0.97
CACNA1D-220ENST00000636999 KINO60870 393 aaKnown RBP9□□□□□ -0.97
CACNA1D-220ENST00000636999 SLC9C2Q5TAH2 1124 aa9□□□□□ -0.97
CACNA1D-220ENST00000636999 IQCA1Q86XH1 822 aa9□□□□□ -0.97
CACNA1D-220ENST00000636999 NUP133Q8WUM0 1156 aa9□□□□□ -0.97
CACNA1D-220ENST00000636999 ZNF594Q96JF6 807 aaPredicted RBP9□□□□□ -0.97
CACNA1D-220ENST00000636999 SSH2Q76I76 1423 aa9□□□□□ -0.97
CACNA1D-220ENST00000636999 CD163L1Q9NR16 1453 aa9□□□□□ -0.97
CACNA1D-220ENST00000636999 SPATA31A1Q5TZJ5 1347 aa9□□□□□ -0.97
CACNA1D-220ENST00000636999 CYP7A1P22680 504 aa9□□□□□ -0.97
CACNA1D-220ENST00000636999 CTSWP56202 376 aa9□□□□□ -0.97
CACNA1D-220ENST00000636999 USPL1Q5W0Q7 1092 aa9□□□□□ -0.97
CACNA1D-220ENST00000636999 NUP62CLQ9H1M0 184 aa9□□□□□ -0.97
CACNA1D-220ENST00000636999 MCMDC2Q4G0Z9 681 aa9□□□□□ -0.97
CACNA1D-220ENST00000636999 NAA16Q6N069 864 aaPredicted RBP9□□□□□ -0.97
CACNA1D-220ENST00000636999 TCEANC2Q96MN5 208 aa9□□□□□ -0.97
CACNA1D-220ENST00000636999 CRNKL1Q9BZJ0 848 aaKnown RBP9□□□□□ -0.97
CACNA1D-220ENST00000636999 H0YIN7 160 aa9□□□□□ -0.97
CACNA1D-220ENST00000636999 STX6O43752 255 aa9□□□□□ -0.97
CACNA1D-220ENST00000636999 GSPT1P15170 499 aaKnown RBP9□□□□□ -0.97
CACNA1D-220ENST00000636999 RPS8P62241 208 aaKnown RBP9□□□□□ -0.97
CACNA1D-220ENST00000636999 ZNF444Q8N0Y2 327 aaPredicted RBP9□□□□□ -0.97
CACNA1D-220ENST00000636999 FBXO3Q9UK99 471 aa9□□□□□ -0.97
CACNA1D-220ENST00000636999 MROH5Q6ZUA9 1318 aa8.99□□□□□ -0.97
CACNA1D-220ENST00000636999 CCDC183Q5T5S1 534 aa8.99□□□□□ -0.97
CACNA1D-220ENST00000636999 LPIN2Q92539 896 aa8.99□□□□□ -0.97
CACNA1D-220ENST00000636999 TFIP11Q9UBB9 837 aaKnown RBP8.99□□□□□ -0.97
CACNA1D-220ENST00000636999 BARGINQ6ZT62 677 aa8.99□□□□□ -0.97
CACNA1D-220ENST00000636999 HOMER1Q86YM7 354 aa8.99□□□□□ -0.97
CACNA1D-220ENST00000636999 DBNDD2Q9BQY9 259 aa8.99□□□□□ -0.97
CACNA1D-220ENST00000636999 TCEAL9Q9UHQ7 104 aa8.99□□□□□ -0.97
CACNA1D-220ENST00000636999 AOX1Q06278 1338 aa8.99□□□□□ -0.97
CACNA1D-220ENST00000636999 RANBP6O60518 1105 aaKnown RBP8.99□□□□□ -0.97
CACNA1D-220ENST00000636999 GJB2P29033 226 aa8.99□□□□□ -0.97
CACNA1D-220ENST00000636999 ME1P48163 572 aa8.99□□□□□ -0.97
CACNA1D-220ENST00000636999 OGFOD1Q8N543 542 aa8.99□□□□□ -0.97
CACNA1D-220ENST00000636999 NECAB1Q8N987 351 aa8.99□□□□□ -0.97
CACNA1D-220ENST00000636999 ANTXR1Q9H6X2 564 aa8.99□□□□□ -0.97
CACNA1D-220ENST00000636999 SH2B1Q9NRF2 756 aaPredicted RBP8.99□□□□□ -0.97
CACNA1D-220ENST00000636999 DENND2AQ9ULE3 1009 aa8.99□□□□□ -0.97
CACNA1D-220ENST00000636999 RRP9O43818 475 aaKnown RBP8.98□□□□□ -0.97
CACNA1D-220ENST00000636999 TPD52L1Q16890 204 aaPredicted RBP8.98□□□□□ -0.97
CACNA1D-220ENST00000636999 LRSAM1Q6UWE0 723 aa8.98□□□□□ -0.97
CACNA1D-220ENST00000636999 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.98□□□□□ -0.97
CACNA1D-220ENST00000636999 CCDC196A0A1B0GTZ2 297 aa8.98□□□□□ -0.97
CACNA1D-220ENST00000636999 DTNBO60941 627 aa8.98□□□□□ -0.97
CACNA1D-220ENST00000636999 CHMLP26374 656 aa8.98□□□□□ -0.97
CACNA1D-220ENST00000636999 ALDH1B1P30837 517 aa8.98□□□□□ -0.97
CACNA1D-220ENST00000636999 HMGN5P82970 282 aaKnown RBP8.98□□□□□ -0.97
CACNA1D-220ENST00000636999 CCAR2Q8N163 923 aaKnown RBP8.98□□□□□ -0.97
CACNA1D-220ENST00000636999 CCDC24Q8N4L8 307 aa8.98□□□□□ -0.97
CACNA1D-220ENST00000636999 SPATA31A5Q5VU36 1347 aa8.98□□□□□ -0.97
CACNA1D-220ENST00000636999 SPATA31A7Q8IWB4 1347 aa8.98□□□□□ -0.97
CACNA1D-220ENST00000636999 RNF113AO15541 343 aaKnown RBP8.98□□□□□ -0.97
CACNA1D-220ENST00000636999 RPS6KA4O75676 772 aa8.98□□□□□ -0.97
CACNA1D-220ENST00000636999 CD2BP2O95400 341 aaKnown RBP8.98□□□□□ -0.97
CACNA1D-220ENST00000636999 HIBADHP31937 336 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms