RNA–Protein interactions for RNA: ENST00000636957.1

CHRNA7-222, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 622 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-222ENST00000636957 YBX3P16989 372 aaKnown RBP eCLIP11.32□□□□□ -0.6
CHRNA7-222ENST00000636957 SOGA3Q5TF21 947 aa11.32□□□□□ -0.6
CHRNA7-222ENST00000636957 ANKRD44Q8N8A2 993 aa11.32□□□□□ -0.6
CHRNA7-222ENST00000636957 CDC5LQ99459 802 aaKnown RBP11.32□□□□□ -0.6
CHRNA7-222ENST00000636957 CHMP4BQ9H444 224 aaKnown RBP11.32□□□□□ -0.6
CHRNA7-222ENST00000636957 SEC31BQ9NQW1 1179 aa11.32□□□□□ -0.6
CHRNA7-222ENST00000636957 COG6Q9Y2V7 657 aa11.32□□□□□ -0.6
CHRNA7-222ENST00000636957 CHMP3Q9Y3E7 222 aa11.32□□□□□ -0.6
CHRNA7-222ENST00000636957 LRRFIP2Q9Y608 721 aaKnown RBP11.32□□□□□ -0.6
CHRNA7-222ENST00000636957 TIAM2Q8IVF5 1701 aa11.32□□□□□ -0.6
CHRNA7-222ENST00000636957 GRIN3BO60391 1043 aa11.31□□□□□ -0.6
CHRNA7-222ENST00000636957 ITGA6P23229 1130 aa11.31□□□□□ -0.6
CHRNA7-222ENST00000636957 IFIT5Q13325 482 aaKnown RBP11.31□□□□□ -0.6
CHRNA7-222ENST00000636957 CC2D2BQ6DHV5 1058 aa11.31□□□□□ -0.6
CHRNA7-222ENST00000636957 C7orf43Q8WVR3 580 aa11.31□□□□□ -0.6
CHRNA7-222ENST00000636957 CELF1Q92879 486 aaKnown RBP11.31□□□□□ -0.6
CHRNA7-222ENST00000636957 SNED1Q8TER0 1413 aa11.31□□□□□ -0.6
CHRNA7-222ENST00000636957 DUOX1Q9NRD9 1551 aa11.3□□□□□ -0.6
CHRNA7-222ENST00000636957 ANKRD18BA2A2Z9 1011 aa11.3□□□□□ -0.6
CHRNA7-222ENST00000636957 C21orf2O43822 256 aa11.3□□□□□ -0.6
CHRNA7-222ENST00000636957 RPS8P62241 208 aaKnown RBP11.3□□□□□ -0.6
CHRNA7-222ENST00000636957 CCDC57Q2TAC2 916 aa11.3□□□□□ -0.6
CHRNA7-222ENST00000636957 ANKRD18AQ8IVF6 992 aa11.3□□□□□ -0.6
CHRNA7-222ENST00000636957 ATP6V0A2Q9Y487 856 aa11.3□□□□□ -0.6
CHRNA7-222ENST00000636957 SUPT16HQ9Y5B9 1047 aaKnown RBP11.3□□□□□ -0.6
CHRNA7-222ENST00000636957 MYH13Q9UKX3 1938 aa11.29□□□□□ -0.6
CHRNA7-222ENST00000636957 IGHMBP2P38935 993 aaKnown RBP11.29□□□□□ -0.6
CHRNA7-222ENST00000636957 MTX1Q13505 466 aa11.29□□□□□ -0.6
CHRNA7-222ENST00000636957 GRIPAP1Q4V328 841 aa11.29□□□□□ -0.6
CHRNA7-222ENST00000636957 CCDC93Q567U6 631 aa11.29□□□□□ -0.6
CHRNA7-222ENST00000636957 SP8Q8IXZ3 490 aa11.29□□□□□ -0.6
CHRNA7-222ENST00000636957 TMX4Q9H1E5 349 aaPredicted RBP11.29□□□□□ -0.6
CHRNA7-222ENST00000636957 ZBTB40Q9NUA8 1239 aa11.29□□□□□ -0.6
CHRNA7-222ENST00000636957 CENPBP07199 599 aaPredicted RBP11.28□□□□□ -0.6
CHRNA7-222ENST00000636957 TAF7LQ5H9L4 462 aa11.28□□□□□ -0.6
CHRNA7-222ENST00000636957 RTKN2Q8IZC4 609 aa11.28□□□□□ -0.6
CHRNA7-222ENST00000636957 MPHOSPH8Q99549 860 aa11.28□□□□□ -0.6
CHRNA7-222ENST00000636957 BSDC1Q9NW68 430 aaPredicted RBP11.28□□□□□ -0.6
CHRNA7-222ENST00000636957 PSME4Q14997 1843 aa11.28□□□□□ -0.6
CHRNA7-222ENST00000636957 ARAP2Q8WZ64 1704 aa11.27□□□□□ -0.61
CHRNA7-222ENST00000636957 OLFM4Q6UX06 510 aa11.27□□□□□ -0.61
CHRNA7-222ENST00000636957 C1orf115Q9H7X2 142 aa11.27□□□□□ -0.61
CHRNA7-222ENST00000636957 LTBP3Q9NS15 1303 aa11.27□□□□□ -0.61
CHRNA7-222ENST00000636957 NFKBIEO00221 500 aa11.26□□□□□ -0.61
CHRNA7-222ENST00000636957 SRGAP3O43295 1099 aa11.26□□□□□ -0.61
CHRNA7-222ENST00000636957 RFX5P48382 616 aaPredicted RBP11.26□□□□□ -0.61
CHRNA7-222ENST00000636957 LDHAL6AQ6ZMR3 332 aa11.26□□□□□ -0.61
CHRNA7-222ENST00000636957 ARHGAP27Q6ZUM4 889 aa11.26□□□□□ -0.61
CHRNA7-222ENST00000636957 SLC51AQ86UW1 340 aa11.26□□□□□ -0.61
CHRNA7-222ENST00000636957 ZNF594Q96JF6 807 aaPredicted RBP11.26□□□□□ -0.61
CHRNA7-222ENST00000636957 PSMD1Q99460 953 aa11.26□□□□□ -0.61
CHRNA7-222ENST00000636957 TAOK3Q9H2K8 898 aa11.26□□□□□ -0.61
CHRNA7-222ENST00000636957 FKBP4Q02790 459 aaKnown RBP eCLIP11.25□□□□□ -0.61
CHRNA7-222ENST00000636957 PTPN12Q05209 780 aaKnown RBP11.25□□□□□ -0.61
CHRNA7-222ENST00000636957 CEP85Q6P2H3 762 aa11.25□□□□□ -0.61
CHRNA7-222ENST00000636957 DPP8Q6V1X1 898 aaPredicted RBP11.25□□□□□ -0.61
CHRNA7-222ENST00000636957 MPNDQ8N594 471 aa11.25□□□□□ -0.61
CHRNA7-222ENST00000636957 CRBNQ96SW2 442 aa11.25□□□□□ -0.61
CHRNA7-222ENST00000636957 COPRSQ9NQ92 184 aa11.25□□□□□ -0.61
CHRNA7-222ENST00000636957 CNNM1Q9NRU3 951 aa11.25□□□□□ -0.61
CHRNA7-222ENST00000636957 PODXL2Q9NZ53 605 aa11.25□□□□□ -0.61
CHRNA7-222ENST00000636957 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
CHRNA7-222ENST00000636957 MINPP1Q9UNW1 487 aa11.25□□□□□ -0.61
CHRNA7-222ENST00000636957 XDHP47989 1333 aa11.25□□□□□ -0.61
CHRNA7-222ENST00000636957 PNMA6EA0A0J9YXQ4 647 aa11.24□□□□□ -0.61
CHRNA7-222ENST00000636957 ATP8B2P98198 1209 aa11.24□□□□□ -0.61
CHRNA7-222ENST00000636957 RASSF7Q02833 373 aa11.24□□□□□ -0.61
CHRNA7-222ENST00000636957 AAMPQ13685 434 aa11.24□□□□□ -0.61
CHRNA7-222ENST00000636957 RPAP2Q8IXW5 612 aaPredicted RBP11.24□□□□□ -0.61
CHRNA7-222ENST00000636957 KLHDC4Q8TBB5 520 aa11.24□□□□□ -0.61
CHRNA7-222ENST00000636957 SSH3Q8TE77 659 aa11.24□□□□□ -0.61
CHRNA7-222ENST00000636957 RTFDC1Q9BY42 306 aaPredicted RBP11.24□□□□□ -0.61
CHRNA7-222ENST00000636957 ANKRD2Q9GZV1 360 aa11.24□□□□□ -0.61
CHRNA7-222ENST00000636957 ANKIB1Q9P2G1 1089 aa11.24□□□□□ -0.61
CHRNA7-222ENST00000636957 NSFL1CQ9UNZ2 370 aaKnown RBP11.24□□□□□ -0.61
CHRNA7-222ENST00000636957 FARP1Q9Y4F1 1045 aaPredicted RBP11.24□□□□□ -0.61
CHRNA7-222ENST00000636957 ZNF646O15015 1829 aaPredicted RBP11.23□□□□□ -0.61
CHRNA7-222ENST00000636957 SCN9AQ15858 1988 aa11.23□□□□□ -0.61
CHRNA7-222ENST00000636957 EYA2O00167 538 aa11.23□□□□□ -0.61
CHRNA7-222ENST00000636957 CIAO1O76071 339 aa11.23□□□□□ -0.61
CHRNA7-222ENST00000636957 LMNB1P20700 586 aa11.23□□□□□ -0.61
CHRNA7-222ENST00000636957 GPSM2P81274 684 aa11.23□□□□□ -0.61
CHRNA7-222ENST00000636957 CHRNDQ07001 517 aa11.23□□□□□ -0.61
CHRNA7-222ENST00000636957 SUPT20HQ8NEM7 779 aa11.23□□□□□ -0.61
CHRNA7-222ENST00000636957 PUS3Q9BZE2 481 aaKnown RBP11.23□□□□□ -0.61
CHRNA7-222ENST00000636957 GGA1Q9UJY5 639 aa11.23□□□□□ -0.61
CHRNA7-222ENST00000636957 RIPOR2Q9Y4F9 1068 aa11.23□□□□□ -0.61
CHRNA7-222ENST00000636957 MROH5Q6ZUA9 1318 aa11.23□□□□□ -0.61
CHRNA7-222ENST00000636957 HMMRO75330 724 aa11.22□□□□□ -0.61
CHRNA7-222ENST00000636957 UFL1O94874 794 aa11.22□□□□□ -0.61
CHRNA7-222ENST00000636957 COL4A5P29400 1685 aa11.22□□□□□ -0.61
CHRNA7-222ENST00000636957 CLCN6P51797 869 aa11.22□□□□□ -0.61
CHRNA7-222ENST00000636957 LRRC24Q50LG9 513 aa11.22□□□□□ -0.61
CHRNA7-222ENST00000636957 TBC1D16Q8TBP0 767 aa11.22□□□□□ -0.61
CHRNA7-222ENST00000636957 DCBLD2Q96PD2 775 aa11.22□□□□□ -0.61
CHRNA7-222ENST00000636957 SIL1Q9H173 461 aa11.22□□□□□ -0.61
CHRNA7-222ENST00000636957 VPS33BQ9H267 617 aa11.22□□□□□ -0.61
CHRNA7-222ENST00000636957 PA2G4Q9UQ80 394 aaKnown RBP11.22□□□□□ -0.61
CHRNA7-222ENST00000636957 MED23Q9ULK4 1368 aa11.21□□□□□ -0.61
CHRNA7-222ENST00000636957 ZC3H4Q9UPT8 1303 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms