RNA–Protein interactions for RNA: ENST00000636605.1

CLN8-210, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,069 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-210ENST00000636605 ATP9BO43861 1147 aa8.22□□□□□ -1.09
CLN8-210ENST00000636605 PPP1R15AO75807 674 aaPredicted RBP8.22□□□□□ -1.09
CLN8-210ENST00000636605 PSME1Q06323 249 aa8.22□□□□□ -1.09
CLN8-210ENST00000636605 TRIM26Q12899 539 aaPredicted RBP8.22□□□□□ -1.09
CLN8-210ENST00000636605 ARSJQ5FYB0 599 aaPredicted RBP8.22□□□□□ -1.09
CLN8-210ENST00000636605 LINC00114Q6XXX2 140 aa8.22□□□□□ -1.09
CLN8-210ENST00000636605 SLC9A9Q8IVB4 645 aa8.22□□□□□ -1.09
CLN8-210ENST00000636605 FNBP4Q8N3X1 1017 aaPredicted RBP8.22□□□□□ -1.09
CLN8-210ENST00000636605 AVENQ9NQS1 362 aaPredicted RBP8.22□□□□□ -1.09
CLN8-210ENST00000636605 KLF15Q9UIH9 416 aa8.22□□□□□ -1.09
CLN8-210ENST00000636605 GPC6Q9Y625 555 aaPredicted RBP8.22□□□□□ -1.09
CLN8-210ENST00000636605 ADGRB3O60242 1522 aa8.22□□□□□ -1.09
CLN8-210ENST00000636605 SYNMO15061 1565 aa8.22□□□□□ -1.09
CLN8-210ENST00000636605 PIK3C2BO00750 1634 aa8.21□□□□□ -1.09
CLN8-210ENST00000636605 NPHP4O75161 1426 aaPredicted RBP8.21□□□□□ -1.09
CLN8-210ENST00000636605 ARHGAP23Q9P227 1491 aa8.21□□□□□ -1.09
CLN8-210ENST00000636605 DKK1O94907 266 aa8.21□□□□□ -1.1
CLN8-210ENST00000636605 CD33P20138 364 aa8.21□□□□□ -1.1
CLN8-210ENST00000636605 HDGFL1Q5TGJ6 251 aa8.21□□□□□ -1.1
CLN8-210ENST00000636605 L3MBTL2Q969R5 705 aa8.21□□□□□ -1.1
CLN8-210ENST00000636605 MKL2Q9ULH7 1088 aa8.21□□□□□ -1.1
CLN8-210ENST00000636605 PARP3Q9Y6F1 533 aa8.21□□□□□ -1.1
CLN8-210ENST00000636605 RPGRIP1LQ68CZ1 1315 aa8.21□□□□□ -1.1
CLN8-210ENST00000636605 POLR1AO95602 1720 aaPredicted RBP8.2□□□□□ -1.1
CLN8-210ENST00000636605 SPHKAPQ2M3C7 1700 aa8.2□□□□□ -1.1
CLN8-210ENST00000636605 TRPM2O94759 1503 aa8.2□□□□□ -1.1
CLN8-210ENST00000636605 PROCP04070 461 aa8.2□□□□□ -1.1
CLN8-210ENST00000636605 COL8A1P27658 744 aa8.2□□□□□ -1.1
CLN8-210ENST00000636605 DGKGP49619 791 aa8.2□□□□□ -1.1
CLN8-210ENST00000636605 HIRAP54198 1017 aaPredicted RBP8.2□□□□□ -1.1
CLN8-210ENST00000636605 LAMC2Q13753 1193 aa8.2□□□□□ -1.1
CLN8-210ENST00000636605 ZNF326Q5BKZ1 582 aaKnown RBP8.2□□□□□ -1.1
CLN8-210ENST00000636605 ALYREFQ86V81 257 aaKnown RBP8.2□□□□□ -1.1
CLN8-210ENST00000636605 SIX5Q8N196 739 aa8.2□□□□□ -1.1
CLN8-210ENST00000636605 CCDC144AA2RUR9 1427 aa8.2□□□□□ -1.1
CLN8-210ENST00000636605 M0R2N6 131 aa8.19□□□□□ -1.1
CLN8-210ENST00000636605 ADH6P28332 368 aa8.19□□□□□ -1.1
CLN8-210ENST00000636605 NOS2P35228 1153 aa8.19□□□□□ -1.1
CLN8-210ENST00000636605 ATP1A2P50993 1020 aa8.19□□□□□ -1.1
CLN8-210ENST00000636605 ZNF468Q5VIY5 522 aaPredicted RBP8.19□□□□□ -1.1
CLN8-210ENST00000636605 FCHSD1Q86WN1 690 aa8.19□□□□□ -1.1
CLN8-210ENST00000636605 TNS4Q8IZW8 715 aa8.19□□□□□ -1.1
CLN8-210ENST00000636605 TPCN2Q8NHX9 752 aa8.19□□□□□ -1.1
CLN8-210ENST00000636605 MDFIQ99750 246 aa8.19□□□□□ -1.1
CLN8-210ENST00000636605 SPOCK3Q9BQ16 436 aa8.19□□□□□ -1.1
CLN8-210ENST00000636605 STRN4Q9NRL3 753 aa8.19□□□□□ -1.1
CLN8-210ENST00000636605 TMEM131LA2VDJ0 1609 aa8.18□□□□□ -1.1
CLN8-210ENST00000636605 NEURL1BA8MQ27 555 aa8.18□□□□□ -1.1
CLN8-210ENST00000636605 KHNYNO15037 678 aaKnown RBP8.18□□□□□ -1.1
CLN8-210ENST00000636605 LTKP29376 864 aa8.18□□□□□ -1.1
CLN8-210ENST00000636605 SH3PXD2AQ5TCZ1 1133 aa8.18□□□□□ -1.1
CLN8-210ENST00000636605 CCDC102BQ68D86 513 aa8.18□□□□□ -1.1
CLN8-210ENST00000636605 LARGE2Q8N3Y3 721 aa8.18□□□□□ -1.1
CLN8-210ENST00000636605 BTBD6Q96KE9 485 aa8.18□□□□□ -1.1
CLN8-210ENST00000636605 PLEKHG1Q9ULL1 1385 aa8.18□□□□□ -1.1
CLN8-210ENST00000636605 RIMS2Q9UQ26 1411 aa8.18□□□□□ -1.1
CLN8-210ENST00000636605 IQSEC2Q5JU85 1478 aa8.18□□□□□ -1.1
CLN8-210ENST00000636605 IQGAP1P46940 1657 aa8.18□□□□□ -1.1
CLN8-210ENST00000636605 KRBA1A5PL33 1030 aa8.17□□□□□ -1.1
CLN8-210ENST00000636605 MSTNO14793 375 aa8.17□□□□□ -1.1
CLN8-210ENST00000636605 TMEM132AQ24JP5 1023 aa8.17□□□□□ -1.1
CLN8-210ENST00000636605 TBCELQ5QJ74 424 aa8.17□□□□□ -1.1
CLN8-210ENST00000636605 PROSER2Q86WR7 435 aaPredicted RBP8.17□□□□□ -1.1
CLN8-210ENST00000636605 OGFOD1Q8N543 542 aa8.17□□□□□ -1.1
CLN8-210ENST00000636605 TBX22Q9Y458 520 aa8.17□□□□□ -1.1
CLN8-210ENST00000636605 CPS1P31327 1500 aa8.17□□□□□ -1.1
CLN8-210ENST00000636605 KIF1BO60333 1816 aa8.17□□□□□ -1.1
CLN8-210ENST00000636605 SERTM1A2A2V5 107 aa8.16□□□□□ -1.1
CLN8-210ENST00000636605 PALM3A6NDB9 673 aaPredicted RBP8.16□□□□□ -1.1
CLN8-210ENST00000636605 GNB5O14775 395 aa8.16□□□□□ -1.1
CLN8-210ENST00000636605 ZFYVE9O95405 1425 aa8.16□□□□□ -1.1
CLN8-210ENST00000636605 PSMA6P60900 246 aaKnown RBP8.16□□□□□ -1.1
CLN8-210ENST00000636605 BICDL1Q6ZP65 573 aa8.16□□□□□ -1.1
CLN8-210ENST00000636605 GLMNQ92990 594 aa8.16□□□□□ -1.1
CLN8-210ENST00000636605 CLUAP1Q96AJ1 413 aa8.16□□□□□ -1.1
CLN8-210ENST00000636605 NEURL4Q96JN8 1562 aa8.16□□□□□ -1.1
CLN8-210ENST00000636605 PIK3R4Q99570 1358 aa8.16□□□□□ -1.1
CLN8-210ENST00000636605 TSPAN10Q9H1Z9 355 aaPredicted RBP8.16□□□□□ -1.1
CLN8-210ENST00000636605 RRAGCQ9HB90 399 aa8.16□□□□□ -1.1
CLN8-210ENST00000636605 ANKRD30BQ9BXX2 1392 aa8.15□□□□□ -1.1
CLN8-210ENST00000636605 C1orf53Q5VUE5 145 aa8.15□□□□□ -1.1
CLN8-210ENST00000636605 CHSY3Q70JA7 882 aa8.15□□□□□ -1.1
CLN8-210ENST00000636605 FBXO41Q8TF61 875 aa8.15□□□□□ -1.1
CLN8-210ENST00000636605 SUV39H2Q9H5I1 410 aa8.15□□□□□ -1.1
CLN8-210ENST00000636605 MARK1Q9P0L2 795 aa8.15□□□□□ -1.1
CLN8-210ENST00000636605 MKRN1Q9UHC7 482 aaKnown RBP8.15□□□□□ -1.1
CLN8-210ENST00000636605 GJA3Q9Y6H8 435 aa8.15□□□□□ -1.1
CLN8-210ENST00000636605 ZNF335Q9H4Z2 1342 aaPredicted RBP8.14□□□□□ -1.11
CLN8-210ENST00000636605 KCNA6P17658 529 aa8.14□□□□□ -1.11
CLN8-210ENST00000636605 AMPD1P23109 780 aa8.14□□□□□ -1.11
CLN8-210ENST00000636605 LRRC69Q6ZNQ3 347 aa8.14□□□□□ -1.11
CLN8-210ENST00000636605 MAFBQ9Y5Q3 323 aaPredicted RBP8.14□□□□□ -1.11
CLN8-210ENST00000636605 CLTCL1P53675 1640 aa8.14□□□□□ -1.11
CLN8-210ENST00000636605 DIP2AQ14689 1571 aa8.14□□□□□ -1.11
CLN8-210ENST00000636605 C21orf2O43822 256 aa8.13□□□□□ -1.11
CLN8-210ENST00000636605 SLC26A8Q96RN1 970 aa8.13□□□□□ -1.11
CLN8-210ENST00000636605 ZNF232Q9UNY5 417 aa8.13□□□□□ -1.11
CLN8-210ENST00000636605 LTBP4Q8N2S1 1624 aa8.12□□□□□ -1.11
CLN8-210ENST00000636605 PIK3R2O00459 728 aa8.12□□□□□ -1.11
CLN8-210ENST00000636605 TOM1O60784 492 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms