RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 PSMD1Q99460 953 aa6.64□□□□□ -1.35
CHD2-224ENST00000636410 TAOK3Q9H2K8 898 aa6.64□□□□□ -1.35
CHD2-224ENST00000636410 ZBTB40Q9NUA8 1239 aa6.64□□□□□ -1.35
CHD2-224ENST00000636410 ZNF646O15015 1829 aaPredicted RBP6.64□□□□□ -1.35
CHD2-224ENST00000636410 MYH13Q9UKX3 1938 aa6.64□□□□□ -1.35
CHD2-224ENST00000636410 PNMA6EA0A0J9YXQ4 647 aa6.63□□□□□ -1.35
CHD2-224ENST00000636410 COL4A5P29400 1685 aa6.63□□□□□ -1.35
CHD2-224ENST00000636410 XDHP47989 1333 aa6.63□□□□□ -1.35
CHD2-224ENST00000636410 GPSM2P81274 684 aa6.63□□□□□ -1.35
CHD2-224ENST00000636410 RASSF7Q02833 373 aa6.63□□□□□ -1.35
CHD2-224ENST00000636410 PTPN12Q05209 780 aaKnown RBP6.63□□□□□ -1.35
CHD2-224ENST00000636410 CEP85Q6P2H3 762 aa6.63□□□□□ -1.35
CHD2-224ENST00000636410 DPP8Q6V1X1 898 aaPredicted RBP6.63□□□□□ -1.35
CHD2-224ENST00000636410 LDHAL6AQ6ZMR3 332 aa6.63□□□□□ -1.35
CHD2-224ENST00000636410 RPAP2Q8IXW5 612 aaPredicted RBP6.63□□□□□ -1.35
CHD2-224ENST00000636410 MPNDQ8N594 471 aa6.63□□□□□ -1.35
CHD2-224ENST00000636410 SUPT20HQ8NEM7 779 aa6.63□□□□□ -1.35
CHD2-224ENST00000636410 KLHDC4Q8TBB5 520 aa6.63□□□□□ -1.35
CHD2-224ENST00000636410 SSH3Q8TE77 659 aa6.63□□□□□ -1.35
CHD2-224ENST00000636410 RTFDC1Q9BY42 306 aaPredicted RBP6.63□□□□□ -1.35
CHD2-224ENST00000636410 ANKRD2Q9GZV1 360 aa6.63□□□□□ -1.35
CHD2-224ENST00000636410 COPRSQ9NQ92 184 aa6.63□□□□□ -1.35
CHD2-224ENST00000636410 CNNM1Q9NRU3 951 aa6.63□□□□□ -1.35
CHD2-224ENST00000636410 PODXL2Q9NZ53 605 aa6.63□□□□□ -1.35
CHD2-224ENST00000636410 FBXO3Q9UK99 471 aa6.63□□□□□ -1.35
CHD2-224ENST00000636410 MINPP1Q9UNW1 487 aa6.63□□□□□ -1.35
CHD2-224ENST00000636410 MED23Q9ULK4 1368 aa6.62□□□□□ -1.35
CHD2-224ENST00000636410 MROH5Q6ZUA9 1318 aa6.62□□□□□ -1.35
CHD2-224ENST00000636410 EYA2O00167 538 aa6.62□□□□□ -1.35
CHD2-224ENST00000636410 CIAO1O76071 339 aa6.62□□□□□ -1.35
CHD2-224ENST00000636410 LMNB1P20700 586 aa6.62□□□□□ -1.35
CHD2-224ENST00000636410 PRELPP51888 382 aa6.62□□□□□ -1.35
CHD2-224ENST00000636410 ATP8B2P98198 1209 aa6.62□□□□□ -1.35
CHD2-224ENST00000636410 CHRNDQ07001 517 aa6.62□□□□□ -1.35
CHD2-224ENST00000636410 AAMPQ13685 434 aa6.62□□□□□ -1.35
CHD2-224ENST00000636410 POLA2Q14181 598 aa6.62□□□□□ -1.35
CHD2-224ENST00000636410 TBC1D16Q8TBP0 767 aa6.62□□□□□ -1.35
CHD2-224ENST00000636410 PUS3Q9BZE2 481 aaKnown RBP6.62□□□□□ -1.35
CHD2-224ENST00000636410 VPS33BQ9H267 617 aa6.62□□□□□ -1.35
CHD2-224ENST00000636410 ANKIB1Q9P2G1 1089 aa6.62□□□□□ -1.35
CHD2-224ENST00000636410 GGA1Q9UJY5 639 aa6.62□□□□□ -1.35
CHD2-224ENST00000636410 NSFL1CQ9UNZ2 370 aaKnown RBP6.62□□□□□ -1.35
CHD2-224ENST00000636410 ZNF804BA4D1E1 1349 aa6.61□□□□□ -1.35
CHD2-224ENST00000636410 ZC3H4Q9UPT8 1303 aaKnown RBP6.61□□□□□ -1.35
CHD2-224ENST00000636410 HMMRO75330 724 aa6.61□□□□□ -1.35
CHD2-224ENST00000636410 UFL1O94874 794 aa6.61□□□□□ -1.35
CHD2-224ENST00000636410 ATP2B4P23634 1241 aa6.61□□□□□ -1.35
CHD2-224ENST00000636410 IL15P40933 162 aaPredicted RBP6.61□□□□□ -1.35
CHD2-224ENST00000636410 IARSP41252 1262 aaKnown RBP6.61□□□□□ -1.35
CHD2-224ENST00000636410 LRRC24Q50LG9 513 aa6.61□□□□□ -1.35
CHD2-224ENST00000636410 METTL24Q5JXM2 366 aa6.61□□□□□ -1.35
CHD2-224ENST00000636410 ATG9AQ7Z3C6 839 aa6.61□□□□□ -1.35
CHD2-224ENST00000636410 EYA3Q99504 573 aa6.61□□□□□ -1.35
CHD2-224ENST00000636410 SIL1Q9H173 461 aa6.61□□□□□ -1.35
CHD2-224ENST00000636410 ZNF277Q9NRM2 450 aaPredicted RBP6.61□□□□□ -1.35
CHD2-224ENST00000636410 RNF181Q9P0P0 153 aa6.61□□□□□ -1.35
CHD2-224ENST00000636410 POLLQ9UGP5 575 aa6.61□□□□□ -1.35
CHD2-224ENST00000636410 PA2G4Q9UQ80 394 aaKnown RBP6.61□□□□□ -1.35
CHD2-224ENST00000636410 LEMD3Q9Y2U8 911 aa6.61□□□□□ -1.35
CHD2-224ENST00000636410 RIPOR2Q9Y4F9 1068 aa6.61□□□□□ -1.35
CHD2-224ENST00000636410 SRCAPQ6ZRS2 3230 aa6.61□□□□□ -1.35
CHD2-224ENST00000636410 ZNF609O15014 1411 aa6.6□□□□□ -1.35
CHD2-224ENST00000636410 WDR90Q96KV7 1748 aa6.6□□□□□ -1.35
CHD2-224ENST00000636410 C6orf229H3BNL8 230 aa6.6□□□□□ -1.35
CHD2-224ENST00000636410 PPIP5K2O43314 1243 aa6.6□□□□□ -1.35
CHD2-224ENST00000636410 TAF5LO75529 589 aa6.6□□□□□ -1.35
CHD2-224ENST00000636410 PDE8BO95263 885 aa6.6□□□□□ -1.35
CHD2-224ENST00000636410 KCNJ4P48050 445 aa6.6□□□□□ -1.35
CHD2-224ENST00000636410 KIAA2012Q0VF49 1180 aa6.6□□□□□ -1.35
CHD2-224ENST00000636410 AOC3Q16853 763 aa6.6□□□□□ -1.35
CHD2-224ENST00000636410 WASHC4Q2M389 1173 aa6.6□□□□□ -1.35
CHD2-224ENST00000636410 C9orf131Q5VYM1 1079 aa6.6□□□□□ -1.35
CHD2-224ENST00000636410 SIRT2Q8IXJ6 389 aa6.6□□□□□ -1.35
CHD2-224ENST00000636410 VGLL2Q8N8G2 317 aa6.6□□□□□ -1.35
CHD2-224ENST00000636410 HELBQ8NG08 1087 aaPredicted RBP6.6□□□□□ -1.35
CHD2-224ENST00000636410 EXOC6Q8TAG9 804 aa6.6□□□□□ -1.35
CHD2-224ENST00000636410 NOP58Q9Y2X3 529 aaKnown RBP6.6□□□□□ -1.35
CHD2-224ENST00000636410 SCN9AQ15858 1988 aa6.6□□□□□ -1.35
CHD2-224ENST00000636410 IRS2Q9Y4H2 1338 aa6.59□□□□□ -1.35
CHD2-224ENST00000636410 SURF6O75683 361 aaKnown RBP6.59□□□□□ -1.35
CHD2-224ENST00000636410 IRX6P78412 446 aaPredicted RBP6.59□□□□□ -1.35
CHD2-224ENST00000636410 G3BP1Q13283 466 aaKnown RBP eCLIP6.59□□□□□ -1.35
CHD2-224ENST00000636410 UBE4AQ14139 1066 aa6.59□□□□□ -1.35
CHD2-224ENST00000636410 PUM3Q15397 648 aaKnown RBP6.59□□□□□ -1.35
CHD2-224ENST00000636410 HSP90AB4PQ58FF6 505 aa6.59□□□□□ -1.35
CHD2-224ENST00000636410 C15orf52Q6ZUT6 534 aaKnown RBP6.59□□□□□ -1.35
CHD2-224ENST00000636410 NIM1KQ8IY84 436 aa6.59□□□□□ -1.35
CHD2-224ENST00000636410 LARGE2Q8N3Y3 721 aa6.59□□□□□ -1.35
CHD2-224ENST00000636410 JDP2Q8WYK2 163 aa6.59□□□□□ -1.35
CHD2-224ENST00000636410 GPR101Q96P66 508 aaPredicted RBP6.59□□□□□ -1.35
CHD2-224ENST00000636410 ZC3H12CQ9C0D7 883 aaKnown RBP6.59□□□□□ -1.35
CHD2-224ENST00000636410 CEP126Q9P2H0 1117 aa6.59□□□□□ -1.35
CHD2-224ENST00000636410 SCN4AP35499 1836 aa6.58□□□□□ -1.36
CHD2-224ENST00000636410 WTIPA6NIX2 430 aaPredicted RBP6.58□□□□□ -1.36
CHD2-224ENST00000636410 G3V3G9 751 aa6.58□□□□□ -1.36
CHD2-224ENST00000636410 SNAP23O00161 211 aa6.58□□□□□ -1.36
CHD2-224ENST00000636410 RIMBP2O15034 1052 aa6.58□□□□□ -1.36
CHD2-224ENST00000636410 ECE2O60344 883 aa6.58□□□□□ -1.36
CHD2-224ENST00000636410 SASH1O94885 1247 aa6.58□□□□□ -1.36
CHD2-224ENST00000636410 IFIT1P09914 478 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms