RNA–Protein interactions for RNA: ENST00000636340.1

GABRA1-213, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-213ENST00000636340 USP42Q9H9J4 1324 aaKnown RBP7.5□□□□□ -1.21
GABRA1-213ENST00000636340 TMEM94Q12767 1356 aa7.5□□□□□ -1.21
GABRA1-213ENST00000636340 CEMIPQ8WUJ3 1361 aa7.5□□□□□ -1.21
GABRA1-213ENST00000636340 PPP1R3GB7ZBB8 358 aa7.5□□□□□ -1.21
GABRA1-213ENST00000636340 RNF214Q8ND24 703 aa7.5□□□□□ -1.21
GABRA1-213ENST00000636340 RHPN1Q8TCX5 695 aa7.5□□□□□ -1.21
GABRA1-213ENST00000636340 UCN2Q96RP3 112 aa7.5□□□□□ -1.21
GABRA1-213ENST00000636340 KCNK17Q96T54 332 aa7.5□□□□□ -1.21
GABRA1-213ENST00000636340 GLIPR1L2Q4G1C9 344 aa7.5□□□□□ -1.21
GABRA1-213ENST00000636340 NGDNQ8NEJ9 315 aaKnown RBP7.5□□□□□ -1.21
GABRA1-213ENST00000636340 SYAP1Q96A49 352 aaPredicted RBP7.5□□□□□ -1.21
GABRA1-213ENST00000636340 R3HCC1Q9Y3T6 440 aaKnown RBP7.5□□□□□ -1.21
GABRA1-213ENST00000636340 SURF6O75683 361 aaKnown RBP7.49□□□□□ -1.21
GABRA1-213ENST00000636340 FDX1P10109 184 aa7.49□□□□□ -1.21
GABRA1-213ENST00000636340 PSEN2P49810 448 aa7.49□□□□□ -1.21
GABRA1-213ENST00000636340 RUFY3Q7L099 469 aa7.49□□□□□ -1.21
GABRA1-213ENST00000636340 LTBP4Q8N2S1 1624 aa7.49□□□□□ -1.21
GABRA1-213ENST00000636340 ANKARQ7Z5J8 1434 aa7.49□□□□□ -1.21
GABRA1-213ENST00000636340 MAP4K4O95819 1239 aaPredicted RBP7.48□□□□□ -1.21
GABRA1-213ENST00000636340 NBPF7P0C2Y1 421 aaPredicted RBP7.48□□□□□ -1.21
GABRA1-213ENST00000636340 ZSCAN22P10073 491 aaPredicted RBP7.48□□□□□ -1.21
GABRA1-213ENST00000636340 PTPREP23469 700 aa7.48□□□□□ -1.21
GABRA1-213ENST00000636340 AK2P54819 239 aa7.48□□□□□ -1.21
GABRA1-213ENST00000636340 FUT2Q10981 343 aa7.48□□□□□ -1.21
GABRA1-213ENST00000636340 UVSSAQ2YD98 709 aa7.48□□□□□ -1.21
GABRA1-213ENST00000636340 BEND3Q5T5X7 828 aa7.48□□□□□ -1.21
GABRA1-213ENST00000636340 KCNB2Q92953 911 aa7.48□□□□□ -1.21
GABRA1-213ENST00000636340 KIF1BPQ96EK5 621 aa7.48□□□□□ -1.21
GABRA1-213ENST00000636340 KDM3BQ7LBC6 1761 aa7.48□□□□□ -1.21
GABRA1-213ENST00000636340 HOXB7P09629 217 aa7.48□□□□□ -1.21
GABRA1-213ENST00000636340 EIF4A1P60842 406 aaKnown RBP7.48□□□□□ -1.21
GABRA1-213ENST00000636340 FOXD4L6Q3SYB3 417 aaPredicted RBP7.48□□□□□ -1.21
GABRA1-213ENST00000636340 PPP4R3BQ5MIZ7 849 aa7.48□□□□□ -1.21
GABRA1-213ENST00000636340 FOXD4L3Q6VB84 417 aaPredicted RBP7.48□□□□□ -1.21
GABRA1-213ENST00000636340 RGS22Q8NE09 1264 aa7.48□□□□□ -1.21
GABRA1-213ENST00000636340 LIMCH1Q9UPQ0 1083 aa7.48□□□□□ -1.21
GABRA1-213ENST00000636340 CNPY2Q9Y2B0 182 aa7.48□□□□□ -1.21
GABRA1-213ENST00000636340 TCHHQ07283 1943 aa7.48□□□□□ -1.21
GABRA1-213ENST00000636340 NBPF26B4DH59 902 aa7.47□□□□□ -1.21
GABRA1-213ENST00000636340 SRGAP3O43295 1099 aa7.47□□□□□ -1.21
GABRA1-213ENST00000636340 SYT1P21579 422 aa7.47□□□□□ -1.21
GABRA1-213ENST00000636340 CCDC183Q5T5S1 534 aa7.47□□□□□ -1.21
GABRA1-213ENST00000636340 FAM184AQ8NB25 1140 aa7.47□□□□□ -1.21
GABRA1-213ENST00000636340 FUCA2Q9BTY2 467 aa7.47□□□□□ -1.21
GABRA1-213ENST00000636340 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.47□□□□□ -1.21
GABRA1-213ENST00000636340 STX6O43752 255 aa7.47□□□□□ -1.21
GABRA1-213ENST00000636340 LARGE1O95461 756 aa7.47□□□□□ -1.21
GABRA1-213ENST00000636340 GCGRP47871 477 aa7.47□□□□□ -1.21
GABRA1-213ENST00000636340 MTX1Q13505 466 aa7.47□□□□□ -1.21
GABRA1-213ENST00000636340 DOK7Q18PE1 504 aa7.47□□□□□ -1.21
GABRA1-213ENST00000636340 SWT1Q5T5J6 900 aaKnown RBP7.47□□□□□ -1.21
GABRA1-213ENST00000636340 CNTROBQ8N137 903 aa7.47□□□□□ -1.21
GABRA1-213ENST00000636340 ZBTB3Q9H5J0 574 aa7.47□□□□□ -1.21
GABRA1-213ENST00000636340 HYPKQ9NX55 129 aa7.47□□□□□ -1.21
GABRA1-213ENST00000636340 KIAA1468Q9P260 1216 aa7.47□□□□□ -1.21
GABRA1-213ENST00000636340 TTC41PQ6P2S7 1318 aa7.47□□□□□ -1.21
GABRA1-213ENST00000636340 ADCY9O60503 1353 aa7.47□□□□□ -1.21
GABRA1-213ENST00000636340 UQCRHLA0A096LP55 91 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 F13A1P00488 732 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 UQCRHP07919 91 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 UBE2HP62256 183 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 ST3GAL1Q11201 340 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 NUTM2GQ5VZR2 741 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 SASS6Q6UVJ0 657 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 USHBP1Q8N6Y0 703 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 PRR7Q8TB68 274 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 DNAAF4Q8WXU2 420 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 DDX17Q92841 729 aaKnown RBP7.46□□□□□ -1.22
GABRA1-213ENST00000636340 LGR6Q9HBX8 967 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 CHPF2Q9P2E5 772 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 AXIN2Q9Y2T1 843 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 PI4KAP2A4QPH2 592 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 KCNQ3O43525 872 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 GLRX3O76003 335 aaKnown RBP7.46□□□□□ -1.22
GABRA1-213ENST00000636340 LETM1O95202 739 aaPredicted RBP7.46□□□□□ -1.22
GABRA1-213ENST00000636340 CPA1P15085 419 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 RBM10P98175 930 aaKnown RBP7.46□□□□□ -1.22
GABRA1-213ENST00000636340 PTH1RQ03431 593 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 TUSC1Q2TAM9 212 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 TMCO4Q5TGY1 634 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 CWC27Q6UX04 472 aaKnown RBP7.46□□□□□ -1.22
GABRA1-213ENST00000636340 PI4KAP1Q8N8J0 262 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 LTV1Q96GA3 475 aaPredicted RBP7.46□□□□□ -1.22
GABRA1-213ENST00000636340 TM6SF1Q9BZW5 370 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 ZSWIM6Q9HCJ5 1215 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 SPG7Q9UQ90 795 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 MTMR6Q9Y217 621 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.46□□□□□ -1.22
GABRA1-213ENST00000636340 NDUFB9Q9Y6M9 179 aa7.46□□□□□ -1.22
GABRA1-213ENST00000636340 LMO7Q8WWI1 1683 aa7.45□□□□□ -1.22
GABRA1-213ENST00000636340 NFAT5O94916 1531 aa7.45□□□□□ -1.22
GABRA1-213ENST00000636340 PALM3A6NDB9 673 aaPredicted RBP7.45□□□□□ -1.22
GABRA1-213ENST00000636340 DYNC1I1O14576 645 aa7.45□□□□□ -1.22
GABRA1-213ENST00000636340 EIF2S2P20042 333 aaKnown RBP7.45□□□□□ -1.22
GABRA1-213ENST00000636340 KIAA2012Q0VF49 1180 aa7.45□□□□□ -1.22
GABRA1-213ENST00000636340 ADCK5Q3MIX3 580 aa7.45□□□□□ -1.22
GABRA1-213ENST00000636340 HSP90AB4PQ58FF6 505 aa7.45□□□□□ -1.22
GABRA1-213ENST00000636340 VPS53Q5VIR6 699 aa7.45□□□□□ -1.22
GABRA1-213ENST00000636340 POTEEQ6S8J3 1075 aa7.45□□□□□ -1.22
GABRA1-213ENST00000636340 PPP1R12CQ9BZL4 782 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms