RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 SCN9AQ15858 1988 aa9.42□□□□□ -0.9
CACNA1A-222ENST00000636022 MYH3P11055 1940 aa9.41□□□□□ -0.9
CACNA1A-222ENST00000636022 SHTN1A0MZ66 631 aa9.41□□□□□ -0.9
CACNA1A-222ENST00000636022 C6orf229H3BNL8 230 aa9.41□□□□□ -0.9
CACNA1A-222ENST00000636022 TRAF5O00463 557 aa9.41□□□□□ -0.9
CACNA1A-222ENST00000636022 ANP32CO43423 234 aa9.41□□□□□ -0.9
CACNA1A-222ENST00000636022 DEFB115Q30KQ5 88 aa9.41□□□□□ -0.9
CACNA1A-222ENST00000636022 CCDC152Q4G0S7 254 aa9.41□□□□□ -0.9
CACNA1A-222ENST00000636022 WDR63Q8IWG1 891 aa9.41□□□□□ -0.9
CACNA1A-222ENST00000636022 GPR101Q96P66 508 aaPredicted RBP9.41□□□□□ -0.9
CACNA1A-222ENST00000636022 STK31Q9BXU1 1019 aa9.41□□□□□ -0.9
CACNA1A-222ENST00000636022 DBNDD1Q9H9R9 158 aa9.41□□□□□ -0.9
CACNA1A-222ENST00000636022 KCNQ5Q9NR82 932 aa9.41□□□□□ -0.9
CACNA1A-222ENST00000636022 POLR2AP24928 1970 aaKnown RBP9.41□□□□□ -0.9
CACNA1A-222ENST00000636022 RTL9Q8NET4 1388 aa9.4□□□□□ -0.9
CACNA1A-222ENST00000636022 FANCIQ9NVI1 1328 aa9.4□□□□□ -0.9
CACNA1A-222ENST00000636022 NEURL1BA8MQ27 555 aa9.4□□□□□ -0.9
CACNA1A-222ENST00000636022 PSMD14O00487 310 aa9.4□□□□□ -0.9
CACNA1A-222ENST00000636022 RIMBP2O15034 1052 aa9.4□□□□□ -0.9
CACNA1A-222ENST00000636022 VAMP4O75379 141 aa9.4□□□□□ -0.9
CACNA1A-222ENST00000636022 CWF19L2Q2TBE0 894 aaKnown RBP9.4□□□□□ -0.9
CACNA1A-222ENST00000636022 TTLL11Q8NHH1 800 aa9.4□□□□□ -0.9
CACNA1A-222ENST00000636022 TRPM4Q8TD43 1214 aa9.4□□□□□ -0.9
CACNA1A-222ENST00000636022 ZC3H15Q8WU90 426 aaKnown RBP9.4□□□□□ -0.9
CACNA1A-222ENST00000636022 DPF2Q92785 391 aa9.4□□□□□ -0.9
CACNA1A-222ENST00000636022 CCDC85AQ96PX6 553 aaPredicted RBP9.4□□□□□ -0.9
CACNA1A-222ENST00000636022 EYA3Q99504 573 aa9.4□□□□□ -0.9
CACNA1A-222ENST00000636022 BCL2L13Q9BXK5 485 aa9.4□□□□□ -0.9
CACNA1A-222ENST00000636022 CNOT7Q9UIV1 285 aaKnown RBP9.4□□□□□ -0.9
CACNA1A-222ENST00000636022 ZBTB12Q9Y330 459 aaPredicted RBP9.4□□□□□ -0.9
CACNA1A-222ENST00000636022 WDR33Q9C0J8 1336 aaKnown RBP9.39□□□□□ -0.91
CACNA1A-222ENST00000636022 H7C1W4 665 aa9.39□□□□□ -0.91
CACNA1A-222ENST00000636022 FOXN1O15353 648 aa9.39□□□□□ -0.91
CACNA1A-222ENST00000636022 ECE2O60344 883 aa9.39□□□□□ -0.91
CACNA1A-222ENST00000636022 EGFRP00533 1210 aa9.39□□□□□ -0.91
CACNA1A-222ENST00000636022 CTSWP56202 376 aa9.39□□□□□ -0.91
CACNA1A-222ENST00000636022 FLIIQ13045 1269 aa9.39□□□□□ -0.91
CACNA1A-222ENST00000636022 DOK7Q18PE1 504 aa9.39□□□□□ -0.91
CACNA1A-222ENST00000636022 MICALL2Q8IY33 904 aa9.39□□□□□ -0.91
CACNA1A-222ENST00000636022 GLIS2Q9BZE0 524 aaPredicted RBP9.39□□□□□ -0.91
CACNA1A-222ENST00000636022 WBP1LQ9NX94 342 aa9.39□□□□□ -0.91
CACNA1A-222ENST00000636022 ABT1Q9ULW3 272 aaKnown RBP9.39□□□□□ -0.91
CACNA1A-222ENST00000636022 PSME4Q14997 1843 aa9.38□□□□□ -0.91
CACNA1A-222ENST00000636022 WTIPA6NIX2 430 aaPredicted RBP9.38□□□□□ -0.91
CACNA1A-222ENST00000636022 H7C1D1 291 aa9.38□□□□□ -0.91
CACNA1A-222ENST00000636022 UFL1O94874 794 aa9.38□□□□□ -0.91
CACNA1A-222ENST00000636022 VIL1P09327 827 aaKnown RBP9.38□□□□□ -0.91
CACNA1A-222ENST00000636022 RPS12P25398 132 aaKnown RBP9.38□□□□□ -0.91
CACNA1A-222ENST00000636022 CASP7P55210 303 aa9.38□□□□□ -0.91
CACNA1A-222ENST00000636022 NEXNQ0ZGT2 675 aa9.38□□□□□ -0.91
CACNA1A-222ENST00000636022 GCKRQ14397 625 aa9.38□□□□□ -0.91
CACNA1A-222ENST00000636022 ANKRD18AQ8IVF6 992 aa9.38□□□□□ -0.91
CACNA1A-222ENST00000636022 ZC3H12CQ9C0D7 883 aaKnown RBP9.38□□□□□ -0.91
CACNA1A-222ENST00000636022 GREM2Q9H772 168 aa9.38□□□□□ -0.91
CACNA1A-222ENST00000636022 ANKIB1Q9P2G1 1089 aa9.38□□□□□ -0.91
CACNA1A-222ENST00000636022 GGA1Q9UJY5 639 aa9.38□□□□□ -0.91
CACNA1A-222ENST00000636022 SALL2Q9Y467 1007 aaPredicted RBP9.38□□□□□ -0.91
CACNA1A-222ENST00000636022 TLL2Q9Y6L7 1015 aa9.38□□□□□ -0.91
CACNA1A-222ENST00000636022 THSD7BQ9C0I4 1608 aa9.38□□□□□ -0.91
CACNA1A-222ENST00000636022 SPEF2Q9C093 1822 aa9.38□□□□□ -0.91
CACNA1A-222ENST00000636022 XDHP47989 1333 aa9.37□□□□□ -0.91
CACNA1A-222ENST00000636022 EXOSC9Q06265 439 aaKnown RBP9.37□□□□□ -0.91
CACNA1A-222ENST00000636022 CDC37L1Q7L3B6 337 aa9.37□□□□□ -0.91
CACNA1A-222ENST00000636022 SAMD7Q7Z3H4 446 aa9.37□□□□□ -0.91
CACNA1A-222ENST00000636022 UBE3BQ7Z3V4 1068 aa9.37□□□□□ -0.91
CACNA1A-222ENST00000636022 SAPCD2Q86UD0 394 aa9.37□□□□□ -0.91
CACNA1A-222ENST00000636022 TNS4Q8IZW8 715 aa9.37□□□□□ -0.91
CACNA1A-222ENST00000636022 DNAAF4Q8WXU2 420 aa9.37□□□□□ -0.91
CACNA1A-222ENST00000636022 CDC5LQ99459 802 aaKnown RBP9.37□□□□□ -0.91
CACNA1A-222ENST00000636022 PLA2G12BQ9BX93 195 aa9.37□□□□□ -0.91
CACNA1A-222ENST00000636022 BSDC1Q9NW68 430 aaPredicted RBP9.37□□□□□ -0.91
CACNA1A-222ENST00000636022 MINPP1Q9UNW1 487 aa9.37□□□□□ -0.91
CACNA1A-222ENST00000636022 ZNF609O15014 1411 aa9.37□□□□□ -0.91
CACNA1A-222ENST00000636022 CELF2O95319 508 aaKnown RBP9.36□□□□□ -0.91
CACNA1A-222ENST00000636022 CSF1RP07333 972 aa9.36□□□□□ -0.91
CACNA1A-222ENST00000636022 ATP2B4P23634 1241 aa9.36□□□□□ -0.91
CACNA1A-222ENST00000636022 FKBP5Q13451 457 aaPredicted RBP9.36□□□□□ -0.91
CACNA1A-222ENST00000636022 TBC1D10BQ4KMP7 808 aaPredicted RBP9.36□□□□□ -0.91
CACNA1A-222ENST00000636022 CYP4F22Q6NT55 531 aa9.36□□□□□ -0.91
CACNA1A-222ENST00000636022 LINS1Q8NG48 757 aa9.36□□□□□ -0.91
CACNA1A-222ENST00000636022 CAPNS2Q96L46 248 aa9.36□□□□□ -0.91
CACNA1A-222ENST00000636022 GMLQ99445 158 aa9.36□□□□□ -0.91
CACNA1A-222ENST00000636022 ZNF646O15015 1829 aaPredicted RBP9.35□□□□□ -0.91
CACNA1A-222ENST00000636022 ECE1P42892 770 aa9.35□□□□□ -0.91
CACNA1A-222ENST00000636022 CTCFP49711 727 aaPredicted RBP9.35□□□□□ -0.91
CACNA1A-222ENST00000636022 ZNF280AP59817 542 aaPredicted RBP9.35□□□□□ -0.91
CACNA1A-222ENST00000636022 MAP2K1Q02750 393 aaPredicted RBP9.35□□□□□ -0.91
CACNA1A-222ENST00000636022 DLK2Q6UY11 383 aa9.35□□□□□ -0.91
CACNA1A-222ENST00000636022 PODNQ7Z5L7 613 aa9.35□□□□□ -0.91
CACNA1A-222ENST00000636022 USP48Q86UV5 1035 aa9.35□□□□□ -0.91
CACNA1A-222ENST00000636022 FAM9BQ8IZU0 186 aa9.35□□□□□ -0.91
CACNA1A-222ENST00000636022 AGBL3Q8NEM8 1001 aa9.35□□□□□ -0.91
CACNA1A-222ENST00000636022 HHIPL1Q96JK4 782 aa9.35□□□□□ -0.91
CACNA1A-222ENST00000636022 PRDM10Q9NQV6 1147 aa9.35□□□□□ -0.91
CACNA1A-222ENST00000636022 MED23Q9ULK4 1368 aa9.35□□□□□ -0.91
CACNA1A-222ENST00000636022 ZNF521Q96K83 1311 aa9.34□□□□□ -0.91
CACNA1A-222ENST00000636022 ITGA6P23229 1130 aa9.34□□□□□ -0.91
CACNA1A-222ENST00000636022 CCT4P50991 539 aaKnown RBP9.34□□□□□ -0.91
CACNA1A-222ENST00000636022 FAM161AQ3B820 660 aa9.34□□□□□ -0.91
CACNA1A-222ENST00000636022 BEND3Q5T5X7 828 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms