RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ZNF280AP59817 542 aaPredicted RBP24■■□□□ 1.43
CLN6-212ENST00000636020 GPSM2P81274 684 aa24■■□□□ 1.43
CLN6-212ENST00000636020 CELF1Q92879 486 aaKnown RBP24■■□□□ 1.43
CLN6-212ENST00000636020 EYA3Q99504 573 aa24■■□□□ 1.43
CLN6-212ENST00000636020 UBE2Q2LH0YL09 131 aa23.99■■□□□ 1.43
CLN6-212ENST00000636020 FKTNO75072 461 aa23.99■■□□□ 1.43
CLN6-212ENST00000636020 ANXA1P04083 346 aa23.99■■□□□ 1.43
CLN6-212ENST00000636020 TRIM26Q12899 539 aaPredicted RBP23.99■■□□□ 1.43
CLN6-212ENST00000636020 TCIRG1Q13488 830 aa23.99■■□□□ 1.43
CLN6-212ENST00000636020 SCN9AQ15858 1988 aa23.99■■□□□ 1.43
CLN6-212ENST00000636020 BRCA2P51587 3418 aa23.97■■□□□ 1.43
CLN6-212ENST00000636020 EIF2S2P20042 333 aaKnown RBP23.97■■□□□ 1.43
CLN6-212ENST00000636020 TBC1D16Q8TBP0 767 aa23.97■■□□□ 1.43
CLN6-212ENST00000636020 CFHR5Q9BXR6 569 aa23.97■■□□□ 1.43
CLN6-212ENST00000636020 R3HDMLQ9H3Y0 253 aa23.97■■□□□ 1.43
CLN6-212ENST00000636020 DLG5Q8TDM6 1919 aa23.96■■□□□ 1.43
CLN6-212ENST00000636020 DDX60Q8IY21 1712 aaKnown RBP23.96■■□□□ 1.43
CLN6-212ENST00000636020 PITPNM2Q9BZ72 1349 aa23.96■■□□□ 1.43
CLN6-212ENST00000636020 POTEFA5A3E0 1075 aa23.96■■□□□ 1.43
CLN6-212ENST00000636020 SF3B3Q15393 1217 aaKnown RBP23.96■■□□□ 1.43
CLN6-212ENST00000636020 COPS6Q7L5N1 327 aa23.96■■□□□ 1.43
CLN6-212ENST00000636020 ZNF609O15014 1411 aa23.95■■□□□ 1.42
CLN6-212ENST00000636020 AGBL3Q8NEM8 1001 aa23.95■■□□□ 1.42
CLN6-212ENST00000636020 PCGF6Q9BYE7 350 aa23.95■■□□□ 1.42
CLN6-212ENST00000636020 ZC3H12CQ9C0D7 883 aaKnown RBP23.95■■□□□ 1.42
CLN6-212ENST00000636020 PPP2R1AP30153 589 aa23.94■■□□□ 1.42
CLN6-212ENST00000636020 INTS3Q68E01 1043 aaKnown RBP23.94■■□□□ 1.42
CLN6-212ENST00000636020 RSBN1LQ6PCB5 846 aaPredicted RBP23.94■■□□□ 1.42
CLN6-212ENST00000636020 AIMP1Q12904 312 aaKnown RBP23.93■■□□□ 1.42
CLN6-212ENST00000636020 XAGE3Q8WTP9 111 aa23.93■■□□□ 1.42
CLN6-212ENST00000636020 NECTIN2Q92692 538 aa23.93■■□□□ 1.42
CLN6-212ENST00000636020 GMLQ99445 158 aa23.93■■□□□ 1.42
CLN6-212ENST00000636020 SCAF8Q9UPN6 1271 aaKnown RBP23.93■■□□□ 1.42
CLN6-212ENST00000636020 KIAA0100Q14667 2235 aaKnown RBP23.93■■□□□ 1.42
CLN6-212ENST00000636020 COL4A1P02462 1669 aa23.92■■□□□ 1.42
CLN6-212ENST00000636020 SREBF2Q12772 1141 aa23.92■■□□□ 1.42
CLN6-212ENST00000636020 MKRN3Q13064 507 aaKnown RBP23.92■■□□□ 1.42
CLN6-212ENST00000636020 PRAMEF18Q5VWM3 479 aa23.92■■□□□ 1.42
CLN6-212ENST00000636020 ZNF428Q96B54 188 aa23.92■■□□□ 1.42
CLN6-212ENST00000636020 MYOZ2Q9NPC6 264 aa23.92■■□□□ 1.42
CLN6-212ENST00000636020 NEFMP07197 916 aa23.91■■□□□ 1.42
CLN6-212ENST00000636020 PODXL2Q9NZ53 605 aa23.91■■□□□ 1.42
CLN6-212ENST00000636020 USP17L8P0C7I0 530 aa23.9■■□□□ 1.42
CLN6-212ENST00000636020 NFE2L2Q16236 605 aa23.9■■□□□ 1.42
CLN6-212ENST00000636020 TSPYL4Q9UJ04 414 aa23.9■■□□□ 1.42
CLN6-212ENST00000636020 G3V3G9 751 aa23.89■■□□□ 1.41
CLN6-212ENST00000636020 RPS8P62241 208 aaKnown RBP23.89■■□□□ 1.41
CLN6-212ENST00000636020 TTLL12Q14166 644 aaPredicted RBP23.89■■□□□ 1.41
CLN6-212ENST00000636020 DCAF8Q5TAQ9 597 aa23.89■■□□□ 1.41
CLN6-212ENST00000636020 FAM89AQ96GI7 184 aa23.89■■□□□ 1.41
CLN6-212ENST00000636020 PLEKHF1Q96S99 279 aa23.89■■□□□ 1.41
CLN6-212ENST00000636020 TRIM17Q9Y577 477 aa23.89■■□□□ 1.41
CLN6-212ENST00000636020 SZT2Q5T011 3432 aa23.88■■□□□ 1.41
CLN6-212ENST00000636020 UFL1O94874 794 aa23.87■■□□□ 1.41
CLN6-212ENST00000636020 OTOP1Q7RTM1 612 aa23.87■■□□□ 1.41
CLN6-212ENST00000636020 PTPN12Q05209 780 aaKnown RBP23.86■■□□□ 1.41
CLN6-212ENST00000636020 ALDH1A1P00352 501 aa23.85■■□□□ 1.41
CLN6-212ENST00000636020 NBPF9Q3BBW0 867 aa23.85■■□□□ 1.41
CLN6-212ENST00000636020 ISCA1Q9BUE6 129 aa23.85■■□□□ 1.41
CLN6-212ENST00000636020 GGA1Q9UJY5 639 aa23.85■■□□□ 1.41
CLN6-212ENST00000636020 COLQQ9Y215 455 aaPredicted RBP23.85■■□□□ 1.41
CLN6-212ENST00000636020 RBBP6Q7Z6E9 1792 aaKnown RBP23.84■■□□□ 1.41
CLN6-212ENST00000636020 EN2P19622 333 aaPredicted RBP23.84■■□□□ 1.41
CLN6-212ENST00000636020 ANKIB1Q9P2G1 1089 aa23.84■■□□□ 1.41
CLN6-212ENST00000636020 PSME4Q14997 1843 aa23.84■■□□□ 1.41
CLN6-212ENST00000636020 NF2P35240 595 aa23.83■■□□□ 1.41
CLN6-212ENST00000636020 SPRYD7Q5W111 196 aa23.83■■□□□ 1.41
CLN6-212ENST00000636020 USP17L3A6NCW0 530 aa23.82■■□□□ 1.4
CLN6-212ENST00000636020 USP17L4A6NCW7 530 aa23.82■■□□□ 1.4
CLN6-212ENST00000636020 LDLRAD1Q5T700 205 aa23.82■■□□□ 1.4
CLN6-212ENST00000636020 USP17L1Q7RTZ2 530 aa23.82■■□□□ 1.4
CLN6-212ENST00000636020 ATP5J2-PTCD1G3V325 749 aa23.81■■□□□ 1.4
CLN6-212ENST00000636020 RTL5Q5HYW3 569 aaPredicted RBP23.81■■□□□ 1.4
CLN6-212ENST00000636020 ARMC9Q7Z3E5 817 aa23.81■■□□□ 1.4
CLN6-212ENST00000636020 PLBD2Q8NHP8 589 aa23.81■■□□□ 1.4
CLN6-212ENST00000636020 ARMC5Q96C12 935 aa23.81■■□□□ 1.4
CLN6-212ENST00000636020 SEC31BQ9NQW1 1179 aa23.81■■□□□ 1.4
CLN6-212ENST00000636020 BABAM1Q9NWV8 329 aa23.81■■□□□ 1.4
CLN6-212ENST00000636020 PTPN22Q9Y2R2 807 aa23.81■■□□□ 1.4
CLN6-212ENST00000636020 TRIOBPQ9H2D6 2365 aa23.8■■□□□ 1.4
CLN6-212ENST00000636020 IRS4O14654 1257 aaPredicted RBP23.8■■□□□ 1.4
CLN6-212ENST00000636020 INHBEP58166 350 aa23.8■■□□□ 1.4
CLN6-212ENST00000636020 PODNQ7Z5L7 613 aa23.8■■□□□ 1.4
CLN6-212ENST00000636020 WNT10BO00744 389 aa23.79■■□□□ 1.4
CLN6-212ENST00000636020 ANKRD13DQ6ZTN6 518 aa23.79■■□□□ 1.4
CLN6-212ENST00000636020 IFNL1Q8IU54 200 aa23.79■■□□□ 1.4
CLN6-212ENST00000636020 MANSC4A6NHS7 340 aaPredicted RBP23.78■■□□□ 1.4
CLN6-212ENST00000636020 PRKG1Q13976 671 aa23.78■■□□□ 1.4
CLN6-212ENST00000636020 CEP290O15078 2479 aa23.78■■□□□ 1.4
CLN6-212ENST00000636020 A0A0C4DFX4 3053 aa23.78■■□□□ 1.4
CLN6-212ENST00000636020 TRIM28Q13263 835 aaKnown RBP23.77■■□□□ 1.4
CLN6-212ENST00000636020 ERO1AQ96HE7 468 aa23.77■■□□□ 1.4
CLN6-212ENST00000636020 IGF2BP3O00425 579 aaKnown RBP eCLIP23.75■■□□□ 1.39
CLN6-212ENST00000636020 OGFOD1Q8N543 542 aa23.75■■□□□ 1.39
CLN6-212ENST00000636020 CHPF2Q9P2E5 772 aa23.75■■□□□ 1.39
CLN6-212ENST00000636020 DACT2Q5SW24 774 aa23.74■■□□□ 1.39
CLN6-212ENST00000636020 CD99L2Q8TCZ2 262 aa23.74■■□□□ 1.39
CLN6-212ENST00000636020 SLC10A4Q96EP9 437 aa23.74■■□□□ 1.39
CLN6-212ENST00000636020 OTUD5Q96G74 571 aa23.74■■□□□ 1.39
CLN6-212ENST00000636020 MXD3Q9BW11 206 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms