RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 EPHA10Q5JZY3 1008 aa18.92■□□□□ 0.62
CLN8-209ENST00000635970 CNKSR1Q969H4 720 aa18.92■□□□□ 0.62
CLN8-209ENST00000635970 SUCLG2Q96I99 432 aa18.92■□□□□ 0.62
CLN8-209ENST00000635970 RBM17Q96I25 401 aaKnown RBP18.91■□□□□ 0.62
CLN8-209ENST00000635970 MEIS3Q99687 375 aa18.91■□□□□ 0.62
CLN8-209ENST00000635970 OLFM4Q6UX06 510 aa18.9■□□□□ 0.62
CLN8-209ENST00000635970 TTLL11Q8NHH1 800 aa18.9■□□□□ 0.62
CLN8-209ENST00000635970 GCC1Q96CN9 775 aa18.9■□□□□ 0.62
CLN8-209ENST00000635970 KAZALD1Q96I82 304 aa18.9■□□□□ 0.62
CLN8-209ENST00000635970 PLA2G12BQ9BX93 195 aa18.9■□□□□ 0.62
CLN8-209ENST00000635970 GRPEL1Q9HAV7 217 aa18.9■□□□□ 0.62
CLN8-209ENST00000635970 SEC31BQ9NQW1 1179 aa18.9■□□□□ 0.62
CLN8-209ENST00000635970 HSP90B1P14625 803 aaKnown RBP18.9■□□□□ 0.62
CLN8-209ENST00000635970 FOXO4P98177 505 aa18.9■□□□□ 0.62
CLN8-209ENST00000635970 DDX46Q7L014 1031 aaKnown RBP18.9■□□□□ 0.62
CLN8-209ENST00000635970 FER1L6Q2WGJ9 1857 aa18.89■□□□□ 0.62
CLN8-209ENST00000635970 C21orf2O43822 256 aa18.89■□□□□ 0.61
CLN8-209ENST00000635970 ALDH1B1P30837 517 aa18.89■□□□□ 0.61
CLN8-209ENST00000635970 CCDC152Q4G0S7 254 aa18.89■□□□□ 0.61
CLN8-209ENST00000635970 CHD1LQ86WJ1 897 aa18.89■□□□□ 0.61
CLN8-209ENST00000635970 SPRYD3Q8NCJ5 442 aa18.89■□□□□ 0.61
CLN8-209ENST00000635970 CELF1Q92879 486 aaKnown RBP18.89■□□□□ 0.61
CLN8-209ENST00000635970 CRAMP1Q96RY5 1269 aa18.89■□□□□ 0.61
CLN8-209ENST00000635970 GREM2Q9H772 168 aa18.89■□□□□ 0.61
CLN8-209ENST00000635970 LRRC37AA6NMS7 1700 aa18.89■□□□□ 0.61
CLN8-209ENST00000635970 BICC1Q9H694 974 aaKnown RBP18.88■□□□□ 0.61
CLN8-209ENST00000635970 GRAPQ13588 217 aa18.87■□□□□ 0.61
CLN8-209ENST00000635970 RAB3GAP1Q15042 981 aa18.87■□□□□ 0.61
CLN8-209ENST00000635970 GRAPLQ8TC17 118 aaPredicted RBP18.87■□□□□ 0.61
CLN8-209ENST00000635970 GZF1Q9H116 711 aaPredicted RBP18.87■□□□□ 0.61
CLN8-209ENST00000635970 CHMP3Q9Y3E7 222 aa18.87■□□□□ 0.61
CLN8-209ENST00000635970 PPEF1O14829 653 aaPredicted RBP18.86■□□□□ 0.61
CLN8-209ENST00000635970 UBTFL1P0CB47 393 aaPredicted RBP18.86■□□□□ 0.61
CLN8-209ENST00000635970 LMBR1LQ6UX01 489 aa18.86■□□□□ 0.61
CLN8-209ENST00000635970 CCDC88AQ3V6T2 1871 aa18.86■□□□□ 0.61
CLN8-209ENST00000635970 CSF1RP07333 972 aa18.86■□□□□ 0.61
CLN8-209ENST00000635970 C7orf43Q8WVR3 580 aa18.86■□□□□ 0.61
CLN8-209ENST00000635970 ANKRD44Q8N8A2 993 aa18.85■□□□□ 0.61
CLN8-209ENST00000635970 LRRFIP2Q9Y608 721 aaKnown RBP18.85■□□□□ 0.61
CLN8-209ENST00000635970 SBF1O95248 1867 aa18.85■□□□□ 0.61
CLN8-209ENST00000635970 RTL9Q8NET4 1388 aa18.84■□□□□ 0.61
CLN8-209ENST00000635970 DCAF8L1A6NGE4 600 aa18.84■□□□□ 0.61
CLN8-209ENST00000635970 ITGA6P23229 1130 aa18.84■□□□□ 0.61
CLN8-209ENST00000635970 CLEC17AQ6ZS10 378 aa18.84■□□□□ 0.61
CLN8-209ENST00000635970 PANK2Q9BZ23 570 aa18.84■□□□□ 0.61
CLN8-209ENST00000635970 CHD4Q14839 1912 aa18.84■□□□□ 0.61
CLN8-209ENST00000635970 GLIPR1L2Q4G1C9 344 aa18.84■□□□□ 0.61
CLN8-209ENST00000635970 TNPO1Q92973 898 aaKnown RBP18.84■□□□□ 0.61
CLN8-209ENST00000635970 A0A1B0GUL6 1792 aa18.84■□□□□ 0.61
CLN8-209ENST00000635970 SNED1Q8TER0 1413 aa18.84■□□□□ 0.61
CLN8-209ENST00000635970 RASSF7Q02833 373 aa18.83■□□□□ 0.61
CLN8-209ENST00000635970 ARHGAP27Q6ZUM4 889 aa18.83■□□□□ 0.61
CLN8-209ENST00000635970 GRIN3BO60391 1043 aa18.82■□□□□ 0.6
CLN8-209ENST00000635970 RABL6Q3YEC7 729 aaPredicted RBP18.82■□□□□ 0.6
CLN8-209ENST00000635970 LTBP1Q14766 1721 aa18.82■□□□□ 0.6
CLN8-209ENST00000635970 GNAI3P08754 354 aa18.82■□□□□ 0.6
CLN8-209ENST00000635970 RPS8P62241 208 aaKnown RBP18.82■□□□□ 0.6
CLN8-209ENST00000635970 ESPNB1AK53 854 aa18.81■□□□□ 0.6
CLN8-209ENST00000635970 GOLGA6L22H0YM25 854 aa18.81■□□□□ 0.6
CLN8-209ENST00000635970 NFKBIEO00221 500 aa18.81■□□□□ 0.6
CLN8-209ENST00000635970 BBOX1O75936 387 aa18.81■□□□□ 0.6
CLN8-209ENST00000635970 TRIM44Q96DX7 344 aaPredicted RBP18.81■□□□□ 0.6
CLN8-209ENST00000635970 CDC5LQ99459 802 aaKnown RBP18.81■□□□□ 0.6
CLN8-209ENST00000635970 C1orf115Q9H7X2 142 aa18.81■□□□□ 0.6
CLN8-209ENST00000635970 ATP6V0A2Q9Y487 856 aa18.81■□□□□ 0.6
CLN8-209ENST00000635970 DUOX1Q9NRD9 1551 aa18.81■□□□□ 0.6
CLN8-209ENST00000635970 ZBTB7BO15156 539 aaPredicted RBP18.81■□□□□ 0.6
CLN8-209ENST00000635970 IFIT5Q13325 482 aaKnown RBP18.81■□□□□ 0.6
CLN8-209ENST00000635970 CCDC93Q567U6 631 aa18.81■□□□□ 0.6
CLN8-209ENST00000635970 ANKRD18AQ8IVF6 992 aa18.81■□□□□ 0.6
CLN8-209ENST00000635970 ZNF594Q96JF6 807 aaPredicted RBP18.81■□□□□ 0.6
CLN8-209ENST00000635970 LNPKQ9C0E8 428 aa18.81■□□□□ 0.6
CLN8-209ENST00000635970 ANKRD18BA2A2Z9 1011 aa18.8■□□□□ 0.6
CLN8-209ENST00000635970 K7ELQ4 463 aaPredicted RBP18.8■□□□□ 0.6
CLN8-209ENST00000635970 NAP1L5Q96NT1 182 aaPredicted RBP18.8■□□□□ 0.6
CLN8-209ENST00000635970 TIAM2Q8IVF5 1701 aa18.79■□□□□ 0.6
CLN8-209ENST00000635970 PRELPP51888 382 aa18.79■□□□□ 0.6
CLN8-209ENST00000635970 CCDC57Q2TAC2 916 aa18.79■□□□□ 0.6
CLN8-209ENST00000635970 SOGA3Q5TF21 947 aa18.79■□□□□ 0.6
CLN8-209ENST00000635970 SP8Q8IXZ3 490 aa18.79■□□□□ 0.6
CLN8-209ENST00000635970 RRP9O43818 475 aaKnown RBP18.78■□□□□ 0.6
CLN8-209ENST00000635970 GNAI2P04899 355 aa18.78■□□□□ 0.6
CLN8-209ENST00000635970 HSP90AA1P07900 732 aaKnown RBP18.78■□□□□ 0.6
CLN8-209ENST00000635970 KLHDC4Q8TBB5 520 aa18.78■□□□□ 0.6
CLN8-209ENST00000635970 KIF2CQ99661 725 aa18.78■□□□□ 0.6
CLN8-209ENST00000635970 IGHMBP2P38935 993 aaKnown RBP18.77■□□□□ 0.6
CLN8-209ENST00000635970 TAOK3Q9H2K8 898 aa18.77■□□□□ 0.6
CLN8-209ENST00000635970 DICER1Q9UPY3 1922 aaKnown RBP18.77■□□□□ 0.6
CLN8-209ENST00000635970 TMC4Q7Z404 712 aa18.77■□□□□ 0.59
CLN8-209ENST00000635970 TAF7LQ5H9L4 462 aa18.76■□□□□ 0.59
CLN8-209ENST00000635970 ANKRD45Q5TZF3 282 aa18.76■□□□□ 0.59
CLN8-209ENST00000635970 MPHOSPH8Q99549 860 aa18.76■□□□□ 0.59
CLN8-209ENST00000635970 BSDC1Q9NW68 430 aaPredicted RBP18.76■□□□□ 0.59
CLN8-209ENST00000635970 GPSM2P81274 684 aa18.75■□□□□ 0.59
CLN8-209ENST00000635970 CCDC173Q0VFZ6 552 aa18.75■□□□□ 0.59
CLN8-209ENST00000635970 RTKN2Q8IZC4 609 aa18.75■□□□□ 0.59
CLN8-209ENST00000635970 TMX4Q9H1E5 349 aaPredicted RBP18.75■□□□□ 0.59
CLN8-209ENST00000635970 RFX5P48382 616 aaPredicted RBP18.75■□□□□ 0.59
CLN8-209ENST00000635970 FKBP4Q02790 459 aaKnown RBP eCLIP18.75■□□□□ 0.59
CLN8-209ENST00000635970 CC2D2BQ6DHV5 1058 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms