RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 PANK1Q8TE04 598 aa19.4■□□□□ 0.7
CLN6-211ENST00000635754 ZNF277Q9NRM2 450 aaPredicted RBP19.4■□□□□ 0.7
CLN6-211ENST00000635754 NSFL1CQ9UNZ2 370 aaKnown RBP19.4■□□□□ 0.7
CLN6-211ENST00000635754 LRRFIP2Q9Y608 721 aaKnown RBP19.4■□□□□ 0.7
CLN6-211ENST00000635754 DUOX1Q9NRD9 1551 aa19.4■□□□□ 0.7
CLN6-211ENST00000635754 RTFDC1Q9BY42 306 aaPredicted RBP19.39■□□□□ 0.69
CLN6-211ENST00000635754 ZC3H4Q9UPT8 1303 aaKnown RBP19.38■□□□□ 0.69
CLN6-211ENST00000635754 IARSP41252 1262 aaKnown RBP19.38■□□□□ 0.69
CLN6-211ENST00000635754 GPSM2P81274 684 aa19.38■□□□□ 0.69
CLN6-211ENST00000635754 ANKIB1Q9P2G1 1089 aa19.38■□□□□ 0.69
CLN6-211ENST00000635754 XDHP47989 1333 aa19.37■□□□□ 0.69
CLN6-211ENST00000635754 PODXL2Q9NZ53 605 aa19.37■□□□□ 0.69
CLN6-211ENST00000635754 A0A1B0GUL6 1792 aa19.37■□□□□ 0.69
CLN6-211ENST00000635754 GNAI2P04899 355 aa19.36■□□□□ 0.69
CLN6-211ENST00000635754 PDE3AQ14432 1141 aa19.36■□□□□ 0.69
CLN6-211ENST00000635754 LDHAL6AQ6ZMR3 332 aa19.36■□□□□ 0.69
CLN6-211ENST00000635754 ZNF594Q96JF6 807 aaPredicted RBP19.36■□□□□ 0.69
CLN6-211ENST00000635754 VPS33BQ9H267 617 aa19.36■□□□□ 0.69
CLN6-211ENST00000635754 MINPP1Q9UNW1 487 aa19.36■□□□□ 0.69
CLN6-211ENST00000635754 C6orf229H3BNL8 230 aa19.35■□□□□ 0.69
CLN6-211ENST00000635754 PPIP5K2O43314 1243 aa19.35■□□□□ 0.69
CLN6-211ENST00000635754 CNNM1Q9NRU3 951 aa19.35■□□□□ 0.69
CLN6-211ENST00000635754 GGA1Q9UJY5 639 aa19.35■□□□□ 0.69
CLN6-211ENST00000635754 ZBTB7BO15156 539 aaPredicted RBP19.34■□□□□ 0.69
CLN6-211ENST00000635754 UFL1O94874 794 aa19.34■□□□□ 0.69
CLN6-211ENST00000635754 MVPQ14764 893 aaKnown RBP19.34■□□□□ 0.69
CLN6-211ENST00000635754 LARGE2Q8N3Y3 721 aa19.34■□□□□ 0.69
CLN6-211ENST00000635754 JDP2Q8WYK2 163 aa19.34■□□□□ 0.69
CLN6-211ENST00000635754 ANKRD2Q9GZV1 360 aa19.34■□□□□ 0.69
CLN6-211ENST00000635754 AOC3Q16853 763 aa19.34■□□□□ 0.69
CLN6-211ENST00000635754 TBC1D16Q8TBP0 767 aa19.34■□□□□ 0.69
CLN6-211ENST00000635754 EYA3Q99504 573 aa19.34■□□□□ 0.69
CLN6-211ENST00000635754 POLLQ9UGP5 575 aa19.34■□□□□ 0.69
CLN6-211ENST00000635754 DDX19BQ9UMR2 479 aa19.34■□□□□ 0.69
CLN6-211ENST00000635754 COG6Q9Y2V7 657 aa19.34■□□□□ 0.69
CLN6-211ENST00000635754 ATP2B4P23634 1241 aa19.33■□□□□ 0.68
CLN6-211ENST00000635754 RRP1P56182 461 aaKnown RBP19.33■□□□□ 0.68
CLN6-211ENST00000635754 CHRNDQ07001 517 aa19.33■□□□□ 0.68
CLN6-211ENST00000635754 KIAA2012Q0VF49 1180 aa19.33■□□□□ 0.68
CLN6-211ENST00000635754 WASHC4Q2M389 1173 aa19.33■□□□□ 0.68
CLN6-211ENST00000635754 COL4A5P29400 1685 aa19.32■□□□□ 0.68
CLN6-211ENST00000635754 MTX1Q13505 466 aa19.32■□□□□ 0.68
CLN6-211ENST00000635754 C20orf194Q5TEA3 1177 aa19.32■□□□□ 0.68
CLN6-211ENST00000635754 NIM1KQ8IY84 436 aa19.32■□□□□ 0.68
CLN6-211ENST00000635754 CHMP4BQ9H444 224 aaKnown RBP19.32■□□□□ 0.68
CLN6-211ENST00000635754 KLHDC4Q8TBB5 520 aa19.31■□□□□ 0.68
CLN6-211ENST00000635754 SRGAP3O43295 1099 aa19.3■□□□□ 0.68
CLN6-211ENST00000635754 KCNJ4P48050 445 aa19.3■□□□□ 0.68
CLN6-211ENST00000635754 RFX5P48382 616 aaPredicted RBP19.3■□□□□ 0.68
CLN6-211ENST00000635754 PUS3Q9BZE2 481 aaKnown RBP19.3■□□□□ 0.68
CLN6-211ENST00000635754 ZC3H12CQ9C0D7 883 aaKnown RBP19.3■□□□□ 0.68
CLN6-211ENST00000635754 LEMD3Q9Y2U8 911 aa19.3■□□□□ 0.68
CLN6-211ENST00000635754 MROH5Q6ZUA9 1318 aa19.29■□□□□ 0.68
CLN6-211ENST00000635754 RIMBP2O15034 1052 aa19.29■□□□□ 0.68
CLN6-211ENST00000635754 PTPN12Q05209 780 aaKnown RBP19.29■□□□□ 0.68
CLN6-211ENST00000635754 DPY19L2Q6NUT2 758 aa19.29■□□□□ 0.68
CLN6-211ENST00000635754 ZNF784Q8NCA9 323 aaPredicted RBP19.29■□□□□ 0.68
CLN6-211ENST00000635754 ZNF526Q8TF50 670 aaPredicted RBP19.29■□□□□ 0.68
CLN6-211ENST00000635754 GPR101Q96P66 508 aaPredicted RBP19.29■□□□□ 0.68
CLN6-211ENST00000635754 C1orf115Q9H7X2 142 aa19.29■□□□□ 0.68
CLN6-211ENST00000635754 KDM2BQ8NHM5 1336 aa19.29■□□□□ 0.68
CLN6-211ENST00000635754 FZD9O00144 591 aa19.28■□□□□ 0.68
CLN6-211ENST00000635754 HELBQ8NG08 1087 aaPredicted RBP19.28■□□□□ 0.68
CLN6-211ENST00000635754 RIPOR2Q9Y4F9 1068 aa19.28■□□□□ 0.68
CLN6-211ENST00000635754 MED23Q9ULK4 1368 aa19.28■□□□□ 0.68
CLN6-211ENST00000635754 ZNF804BA4D1E1 1349 aa19.28■□□□□ 0.68
CLN6-211ENST00000635754 GLTPD2A6NH11 291 aa19.27■□□□□ 0.68
CLN6-211ENST00000635754 EYA2O00167 538 aa19.27■□□□□ 0.68
CLN6-211ENST00000635754 TAF5LO75529 589 aa19.27■□□□□ 0.68
CLN6-211ENST00000635754 EIF6P56537 245 aaKnown RBP19.27■□□□□ 0.68
CLN6-211ENST00000635754 LRRC24Q50LG9 513 aa19.27■□□□□ 0.68
CLN6-211ENST00000635754 SIL1Q9H173 461 aa19.27■□□□□ 0.68
CLN6-211ENST00000635754 FBXO3Q9UK99 471 aa19.27■□□□□ 0.68
CLN6-211ENST00000635754 G3V3G9 751 aa19.26■□□□□ 0.67
CLN6-211ENST00000635754 METTL24Q5JXM2 366 aa19.26■□□□□ 0.67
CLN6-211ENST00000635754 DCAF8Q5TAQ9 597 aa19.26■□□□□ 0.67
CLN6-211ENST00000635754 GPBP1L1Q9HC44 474 aaPredicted RBP19.26■□□□□ 0.67
CLN6-211ENST00000635754 COPRSQ9NQ92 184 aa19.26■□□□□ 0.67
CLN6-211ENST00000635754 ZNRF3Q9ULT6 936 aa19.26■□□□□ 0.67
CLN6-211ENST00000635754 ZNF541Q9H0D2 1346 aa19.26■□□□□ 0.67
CLN6-211ENST00000635754 PNMA6EA0A0J9YXQ4 647 aa19.25■□□□□ 0.67
CLN6-211ENST00000635754 WTIPA6NIX2 430 aaPredicted RBP19.25■□□□□ 0.67
CLN6-211ENST00000635754 CIAO1O76071 339 aa19.25■□□□□ 0.67
CLN6-211ENST00000635754 DBNDD1Q9H9R9 158 aa19.25■□□□□ 0.67
CLN6-211ENST00000635754 ZBTB40Q9NUA8 1239 aa19.25■□□□□ 0.67
CLN6-211ENST00000635754 PA2G4Q9UQ80 394 aaKnown RBP19.25■□□□□ 0.67
CLN6-211ENST00000635754 ECE2O60344 883 aa19.25■□□□□ 0.67
CLN6-211ENST00000635754 ATP8B2P98198 1209 aa19.25■□□□□ 0.67
CLN6-211ENST00000635754 DOK7Q18PE1 504 aa19.25■□□□□ 0.67
CLN6-211ENST00000635754 WDR90Q96KV7 1748 aa19.24■□□□□ 0.67
CLN6-211ENST00000635754 UBE4AQ14139 1066 aa19.24■□□□□ 0.67
CLN6-211ENST00000635754 CEP85Q6P2H3 762 aa19.24■□□□□ 0.67
CLN6-211ENST00000635754 SNAP23O00161 211 aa19.23■□□□□ 0.67
CLN6-211ENST00000635754 DDNO94850 711 aaPredicted RBP19.23■□□□□ 0.67
CLN6-211ENST00000635754 POLA2Q14181 598 aa19.23■□□□□ 0.67
CLN6-211ENST00000635754 ATG9AQ7Z3C6 839 aa19.23■□□□□ 0.67
CLN6-211ENST00000635754 GPC2Q8N158 579 aa19.23■□□□□ 0.67
CLN6-211ENST00000635754 SSH3Q8TE77 659 aa19.23■□□□□ 0.67
CLN6-211ENST00000635754 PSME4Q14997 1843 aa19.22■□□□□ 0.67
CLN6-211ENST00000635754 PDE8BO95263 885 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms