RNA–Protein interactions for RNA: ENST00000633295.1

LINC01002-225, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 3

Gene LINC01002, Length 492 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-225ENST00000633295 SUPT16HQ9Y5B9 1047 aaKnown RBP11.4□□□□□ -0.58
LINC01002-225ENST00000633295 SPATA31C2B4DYI2 1134 aa11.39□□□□□ -0.59
LINC01002-225ENST00000633295 RNF144AP50876 292 aaPredicted RBP11.39□□□□□ -0.59
LINC01002-225ENST00000633295 C1orf127Q8N9H9 656 aa11.39□□□□□ -0.59
LINC01002-225ENST00000633295 AIDAQ96BJ3 306 aa11.39□□□□□ -0.59
LINC01002-225ENST00000633295 ITPKCQ96DU7 683 aa11.39□□□□□ -0.59
LINC01002-225ENST00000633295 KLF16Q9BXK1 252 aaPredicted RBP11.39□□□□□ -0.59
LINC01002-225ENST00000633295 ARID4BQ4LE39 1312 aaPredicted RBP11.38□□□□□ -0.59
LINC01002-225ENST00000633295 MINDY4BA8MYZ0 360 aa11.38□□□□□ -0.59
LINC01002-225ENST00000633295 PPP1R12AO14974 1030 aaPredicted RBP11.38□□□□□ -0.59
LINC01002-225ENST00000633295 TNNI3KQ59H18 835 aa11.38□□□□□ -0.59
LINC01002-225ENST00000633295 LIAT1Q6ZQX7 453 aa11.38□□□□□ -0.59
LINC01002-225ENST00000633295 HNRNPLLQ8WVV9 542 aaKnown RBP11.38□□□□□ -0.59
LINC01002-225ENST00000633295 EHD4Q9H223 541 aa11.38□□□□□ -0.59
LINC01002-225ENST00000633295 SLKQ9H2G2 1235 aaPredicted RBP11.38□□□□□ -0.59
LINC01002-225ENST00000633295 KLHL42Q9P2K6 505 aa11.38□□□□□ -0.59
LINC01002-225ENST00000633295 R3HCC1Q9Y3T6 440 aaKnown RBP11.38□□□□□ -0.59
LINC01002-225ENST00000633295 MRVI1Q9Y6F6 885 aa11.38□□□□□ -0.59
LINC01002-225ENST00000633295 WASF2Q9Y6W5 498 aa11.38□□□□□ -0.59
LINC01002-225ENST00000633295 GREM1O60565 184 aa11.37□□□□□ -0.59
LINC01002-225ENST00000633295 ZIC2O95409 532 aaPredicted RBP11.37□□□□□ -0.59
LINC01002-225ENST00000633295 EDN3P14138 238 aa11.37□□□□□ -0.59
LINC01002-225ENST00000633295 PCNX4Q63HM2 1172 aa11.37□□□□□ -0.59
LINC01002-225ENST00000633295 BICDL1Q6ZP65 573 aa11.37□□□□□ -0.59
LINC01002-225ENST00000633295 NLRP13Q86W25 1043 aa11.37□□□□□ -0.59
LINC01002-225ENST00000633295 CPLX3Q8WVH0 158 aa11.37□□□□□ -0.59
LINC01002-225ENST00000633295 KLRG1Q96E93 195 aa11.37□□□□□ -0.59
LINC01002-225ENST00000633295 ZNF395Q9H8N7 513 aaPredicted RBP11.37□□□□□ -0.59
LINC01002-225ENST00000633295 CNTN3Q9P232 1028 aa11.37□□□□□ -0.59
LINC01002-225ENST00000633295 XYLBO75191 536 aa11.36□□□□□ -0.59
LINC01002-225ENST00000633295 CDC45O75419 566 aa11.36□□□□□ -0.59
LINC01002-225ENST00000633295 ALDH1A1P00352 501 aa11.36□□□□□ -0.59
LINC01002-225ENST00000633295 CES1P23141 567 aa11.36□□□□□ -0.59
LINC01002-225ENST00000633295 CTC1Q2NKJ3 1217 aa11.36□□□□□ -0.59
LINC01002-225ENST00000633295 ZFYVE1Q9HBF4 777 aa11.36□□□□□ -0.59
LINC01002-225ENST00000633295 MSRB2Q9Y3D2 182 aa11.36□□□□□ -0.59
LINC01002-225ENST00000633295 A0A1W2PP55 124 aa11.35□□□□□ -0.59
LINC01002-225ENST00000633295 ATP4AP20648 1035 aa11.35□□□□□ -0.59
LINC01002-225ENST00000633295 GARTP22102 1010 aa11.35□□□□□ -0.59
LINC01002-225ENST00000633295 ARSHQ5FYA8 562 aa11.35□□□□□ -0.59
LINC01002-225ENST00000633295 FBXL19Q6PCT2 694 aa11.35□□□□□ -0.59
LINC01002-225ENST00000633295 PHC3Q8NDX5 983 aa11.35□□□□□ -0.59
LINC01002-225ENST00000633295 TRIM56Q9BRZ2 755 aaKnown RBP11.35□□□□□ -0.59
LINC01002-225ENST00000633295 SRRTQ9BXP5 876 aaKnown RBP11.35□□□□□ -0.59
LINC01002-225ENST00000633295 OXCT2Q9BYC2 517 aaPredicted RBP11.35□□□□□ -0.59
LINC01002-225ENST00000633295 CCDC113Q9H0I3 377 aa11.35□□□□□ -0.59
LINC01002-225ENST00000633295 TYRO3Q06418 890 aa11.34□□□□□ -0.59
LINC01002-225ENST00000633295 WDR44Q5JSH3 913 aa11.34□□□□□ -0.59
LINC01002-225ENST00000633295 PPME1Q9Y570 386 aa11.34□□□□□ -0.59
LINC01002-225ENST00000633295 FAM221BA6H8Z2 402 aa11.33□□□□□ -0.6
LINC01002-225ENST00000633295 GRNP28799 593 aaKnown RBP11.33□□□□□ -0.6
LINC01002-225ENST00000633295 FCGRTP55899 365 aa11.33□□□□□ -0.6
LINC01002-225ENST00000633295 CHMP4BP1P59074 171 aa11.33□□□□□ -0.6
LINC01002-225ENST00000633295 LMNB2Q03252 620 aa11.33□□□□□ -0.6
LINC01002-225ENST00000633295 TTC39BQ5VTQ0 682 aaPredicted RBP11.33□□□□□ -0.6
LINC01002-225ENST00000633295 TRPM4Q8TD43 1214 aa11.33□□□□□ -0.6
LINC01002-225ENST00000633295 SH3TC2Q8TF17 1288 aa11.33□□□□□ -0.6
LINC01002-225ENST00000633295 APPBP2Q92624 585 aa11.33□□□□□ -0.6
LINC01002-225ENST00000633295 ANAPC16Q96DE5 110 aa11.33□□□□□ -0.6
LINC01002-225ENST00000633295 ZIC5Q96T25 663 aa11.33□□□□□ -0.6
LINC01002-225ENST00000633295 TMEM238LA0A1B0GVL6 79 aa11.32□□□□□ -0.6
LINC01002-225ENST00000633295 LIG3P49916 1009 aa11.32□□□□□ -0.6
LINC01002-225ENST00000633295 WDR4P57081 412 aaKnown RBP11.32□□□□□ -0.6
LINC01002-225ENST00000633295 TAF7LQ5H9L4 462 aa11.32□□□□□ -0.6
LINC01002-225ENST00000633295 MEIOBQ8N635 442 aa11.32□□□□□ -0.6
LINC01002-225ENST00000633295 SHDQ96IW2 340 aa11.32□□□□□ -0.6
LINC01002-225ENST00000633295 ZFAND3Q9H8U3 227 aa11.32□□□□□ -0.6
LINC01002-225ENST00000633295 ABCB6Q9NP58 842 aa11.32□□□□□ -0.6
LINC01002-225ENST00000633295 F6X3S4 739 aa11.31□□□□□ -0.6
LINC01002-225ENST00000633295 APOBRQ0VD83 1088 aa11.31□□□□□ -0.6
LINC01002-225ENST00000633295 GRIN2CQ14957 1233 aa11.31□□□□□ -0.6
LINC01002-225ENST00000633295 PEAR1Q5VY43 1037 aaPredicted RBP11.31□□□□□ -0.6
LINC01002-225ENST00000633295 HOMER1Q86YM7 354 aa11.31□□□□□ -0.6
LINC01002-225ENST00000633295 SLITRK4Q8IW52 837 aa11.31□□□□□ -0.6
LINC01002-225ENST00000633295 EMID1Q96A84 441 aaPredicted RBP11.31□□□□□ -0.6
LINC01002-225ENST00000633295 CEP44Q9C0F1 390 aa11.31□□□□□ -0.6
LINC01002-225ENST00000633295 FANCLQ9NW38 375 aa11.31□□□□□ -0.6
LINC01002-225ENST00000633295 TIMP2P16035 220 aa11.3□□□□□ -0.6
LINC01002-225ENST00000633295 SNAP47Q5SQN1 464 aa11.3□□□□□ -0.6
LINC01002-225ENST00000633295 DTHD1Q6ZMT9 781 aa11.3□□□□□ -0.6
LINC01002-225ENST00000633295 LRRC69Q6ZNQ3 347 aa11.3□□□□□ -0.6
LINC01002-225ENST00000633295 KIAA0907Q7Z7F0 614 aaPredicted RBP11.3□□□□□ -0.6
LINC01002-225ENST00000633295 RPUSD2Q8IZ73 545 aaKnown RBP11.3□□□□□ -0.6
LINC01002-225ENST00000633295 NKD1Q969G9 470 aa11.3□□□□□ -0.6
LINC01002-225ENST00000633295 UBP1Q9NZI7 540 aa11.3□□□□□ -0.6
LINC01002-225ENST00000633295 ROBO2Q9HCK4 1378 aa11.29□□□□□ -0.6
LINC01002-225ENST00000633295 PF4P02776 101 aa11.29□□□□□ -0.6
LINC01002-225ENST00000633295 FAM160A1Q05DH4 1040 aa11.29□□□□□ -0.6
LINC01002-225ENST00000633295 CAMK2GQ13555 558 aaPredicted RBP11.29□□□□□ -0.6
LINC01002-225ENST00000633295 LRRC3Q9BY71 257 aa11.29□□□□□ -0.6
LINC01002-225ENST00000633295 AKAP2Q9Y2D5 859 aa11.29□□□□□ -0.6
LINC01002-225ENST00000633295 SMAD7O15105 426 aaKnown RBP11.28□□□□□ -0.6
LINC01002-225ENST00000633295 PHKA2P46019 1235 aa11.28□□□□□ -0.6
LINC01002-225ENST00000633295 IFRD2Q12894 506 aaPredicted RBP11.28□□□□□ -0.6
LINC01002-225ENST00000633295 MAP3K11Q16584 847 aa11.28□□□□□ -0.6
LINC01002-225ENST00000633295 PLEKHG6Q3KR16 790 aa11.28□□□□□ -0.6
LINC01002-225ENST00000633295 FAM196AQ6ZSG2 479 aa11.28□□□□□ -0.6
LINC01002-225ENST00000633295 GOLM1Q8NBJ4 401 aa11.28□□□□□ -0.6
LINC01002-225ENST00000633295 TSEN34Q9BSV6 310 aaKnown RBP11.28□□□□□ -0.6
LINC01002-225ENST00000633295 IRF2BPLQ9H1B7 796 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms