RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 DPEP1P16444 411 aa18.25■□□□□ 0.51
LIMS4-203ENST00000632758 ERC1Q8IUD2 1116 aa18.25■□□□□ 0.51
LIMS4-203ENST00000632758 KLHL34Q8N239 644 aa18.25■□□□□ 0.51
LIMS4-203ENST00000632758 HELBQ8NG08 1087 aaPredicted RBP18.25■□□□□ 0.51
LIMS4-203ENST00000632758 TAF1P21675 1872 aa18.25■□□□□ 0.51
LIMS4-203ENST00000632758 PDE4AP27815 886 aa18.25■□□□□ 0.51
LIMS4-203ENST00000632758 KCNA3P22001 575 aa18.24■□□□□ 0.51
LIMS4-203ENST00000632758 CHRNDQ07001 517 aa18.24■□□□□ 0.51
LIMS4-203ENST00000632758 METTL24Q5JXM2 366 aa18.24■□□□□ 0.51
LIMS4-203ENST00000632758 STYK1Q6J9G0 422 aa18.24■□□□□ 0.51
LIMS4-203ENST00000632758 CEP126Q9P2H0 1117 aa18.24■□□□□ 0.51
LIMS4-203ENST00000632758 MINPP1Q9UNW1 487 aa18.24■□□□□ 0.51
LIMS4-203ENST00000632758 TAF5LO75529 589 aa18.23■□□□□ 0.51
LIMS4-203ENST00000632758 BBOX1O75936 387 aa18.23■□□□□ 0.51
LIMS4-203ENST00000632758 ALDH1B1P30837 517 aa18.23■□□□□ 0.51
LIMS4-203ENST00000632758 OTUD7AQ8TE49 926 aaPredicted RBP18.23■□□□□ 0.51
LIMS4-203ENST00000632758 SNAP23O00161 211 aa18.22■□□□□ 0.51
LIMS4-203ENST00000632758 TGFB2P61812 414 aa18.22■□□□□ 0.51
LIMS4-203ENST00000632758 VGLL2Q8N8G2 317 aa18.22■□□□□ 0.51
LIMS4-203ENST00000632758 EAF2Q96CJ1 260 aaPredicted RBP18.22■□□□□ 0.51
LIMS4-203ENST00000632758 ZBTB47Q9UFB7 747 aaPredicted RBP18.22■□□□□ 0.51
LIMS4-203ENST00000632758 CD2APQ9Y5K6 639 aa18.22■□□□□ 0.51
LIMS4-203ENST00000632758 MROH5Q6ZUA9 1318 aa18.22■□□□□ 0.51
LIMS4-203ENST00000632758 WTIPA6NIX2 430 aaPredicted RBP18.21■□□□□ 0.51
LIMS4-203ENST00000632758 TIMM10P62072 90 aa18.21■□□□□ 0.51
LIMS4-203ENST00000632758 PPEF1O14829 653 aaPredicted RBP18.21■□□□□ 0.51
LIMS4-203ENST00000632758 PDE8BO95263 885 aa18.21■□□□□ 0.51
LIMS4-203ENST00000632758 TNNI3KQ59H18 835 aa18.21■□□□□ 0.51
LIMS4-203ENST00000632758 OLFM4Q6UX06 510 aa18.21■□□□□ 0.51
LIMS4-203ENST00000632758 CLASRPQ8N2M8 674 aaKnown RBP18.21■□□□□ 0.51
LIMS4-203ENST00000632758 CCDC8Q9H0W5 538 aaPredicted RBP18.21■□□□□ 0.51
LIMS4-203ENST00000632758 FPGT-TNNI3KV9GXZ4 949 aa18.21■□□□□ 0.51
LIMS4-203ENST00000632758 LRP5O75197 1615 aa18.2■□□□□ 0.5
LIMS4-203ENST00000632758 COL11A2P13942 1736 aaPredicted RBP18.2■□□□□ 0.5
LIMS4-203ENST00000632758 RGS3P49796 1198 aa18.2■□□□□ 0.5
LIMS4-203ENST00000632758 AACSQ86V21 672 aa18.2■□□□□ 0.5
LIMS4-203ENST00000632758 CNKSR1Q969H4 720 aa18.2■□□□□ 0.5
LIMS4-203ENST00000632758 WWC3Q9ULE0 1092 aa18.2■□□□□ 0.5
LIMS4-203ENST00000632758 PRPF40BQ6NWY9 871 aaKnown RBP18.19■□□□□ 0.5
LIMS4-203ENST00000632758 NLGN2Q8NFZ4 835 aa18.19■□□□□ 0.5
LIMS4-203ENST00000632758 TLR7Q9NYK1 1049 aaKnown RBP18.19■□□□□ 0.5
LIMS4-203ENST00000632758 ZNF219Q9P2Y4 722 aaPredicted RBP18.19■□□□□ 0.5
LIMS4-203ENST00000632758 A0A1B0GUL7 405 aa18.18■□□□□ 0.5
LIMS4-203ENST00000632758 GPSM2P81274 684 aa18.18■□□□□ 0.5
LIMS4-203ENST00000632758 SP8Q8IXZ3 490 aa18.18■□□□□ 0.5
LIMS4-203ENST00000632758 NEUROD6Q96NK8 337 aa18.18■□□□□ 0.5
LIMS4-203ENST00000632758 GPR108Q9NPR9 543 aa18.18■□□□□ 0.5
LIMS4-203ENST00000632758 ATP6V0A2Q9Y487 856 aa18.18■□□□□ 0.5
LIMS4-203ENST00000632758 FGFR2P21802 821 aa18.17■□□□□ 0.5
LIMS4-203ENST00000632758 TTLL6Q8N841 843 aa18.17■□□□□ 0.5
LIMS4-203ENST00000632758 FHDC1Q9C0D6 1143 aaPredicted RBP18.17■□□□□ 0.5
LIMS4-203ENST00000632758 IFIT2P09913 472 aaKnown RBP18.17■□□□□ 0.5
LIMS4-203ENST00000632758 ADORA1P30542 326 aa18.17■□□□□ 0.5
LIMS4-203ENST00000632758 ATP2B3Q16720 1220 aa18.17■□□□□ 0.5
LIMS4-203ENST00000632758 TMC4Q7Z404 712 aa18.17■□□□□ 0.5
LIMS4-203ENST00000632758 PLEKHM2Q8IWE5 1019 aa18.17■□□□□ 0.5
LIMS4-203ENST00000632758 C7orf43Q8WVR3 580 aa18.17■□□□□ 0.5
LIMS4-203ENST00000632758 DBNDD2Q9BQY9 259 aa18.17■□□□□ 0.5
LIMS4-203ENST00000632758 SALL3Q9BXA9 1300 aa18.17■□□□□ 0.5
LIMS4-203ENST00000632758 ANKRD2Q9GZV1 360 aa18.17■□□□□ 0.5
LIMS4-203ENST00000632758 PIM2Q9P1W9 311 aa18.17■□□□□ 0.5
LIMS4-203ENST00000632758 DBNLQ9UJU6 430 aaKnown RBP18.17■□□□□ 0.5
LIMS4-203ENST00000632758 NSFL1CQ9UNZ2 370 aaKnown RBP18.17■□□□□ 0.5
LIMS4-203ENST00000632758 AKAP2Q9Y2D5 859 aa18.17■□□□□ 0.5
LIMS4-203ENST00000632758 SPEF2Q9C093 1822 aa18.16■□□□□ 0.5
LIMS4-203ENST00000632758 KIF13BQ9NQT8 1826 aa18.16■□□□□ 0.5
LIMS4-203ENST00000632758 PUM3Q15397 648 aaKnown RBP18.16■□□□□ 0.5
LIMS4-203ENST00000632758 TSHZ3Q63HK5 1081 aa18.16■□□□□ 0.5
LIMS4-203ENST00000632758 ANKIB1Q9P2G1 1089 aa18.16■□□□□ 0.5
LIMS4-203ENST00000632758 LPIN2Q92539 896 aa18.15■□□□□ 0.5
LIMS4-203ENST00000632758 XAGE2Q96GT9 111 aa18.15■□□□□ 0.5
LIMS4-203ENST00000632758 C21orf2O43822 256 aa18.14■□□□□ 0.49
LIMS4-203ENST00000632758 ZNF609O15014 1411 aa18.14■□□□□ 0.49
LIMS4-203ENST00000632758 XDHP47989 1333 aa18.13■□□□□ 0.49
LIMS4-203ENST00000632758 MX1P20591 662 aa18.13■□□□□ 0.49
LIMS4-203ENST00000632758 KLRK1P26718 216 aa18.13■□□□□ 0.49
LIMS4-203ENST00000632758 PDE1AP54750 535 aa18.13■□□□□ 0.49
LIMS4-203ENST00000632758 UBE4AQ14139 1066 aa18.13■□□□□ 0.49
LIMS4-203ENST00000632758 GPR101Q96P66 508 aaPredicted RBP18.13■□□□□ 0.49
LIMS4-203ENST00000632758 POLLQ9UGP5 575 aa18.13■□□□□ 0.49
LIMS4-203ENST00000632758 KIAA1551Q9HCM1 1747 aa18.13■□□□□ 0.49
LIMS4-203ENST00000632758 ZNF804BA4D1E1 1349 aa18.13■□□□□ 0.49
LIMS4-203ENST00000632758 SLX4Q8IY92 1834 aa18.13■□□□□ 0.49
LIMS4-203ENST00000632758 SLC5A1P13866 664 aa18.13■□□□□ 0.49
LIMS4-203ENST00000632758 KCNJ4P48050 445 aa18.13■□□□□ 0.49
LIMS4-203ENST00000632758 DALRD3Q5D0E6 543 aaKnown RBP18.13■□□□□ 0.49
LIMS4-203ENST00000632758 MPNDQ8N594 471 aa18.13■□□□□ 0.49
LIMS4-203ENST00000632758 SYT17Q9BSW7 474 aa18.13■□□□□ 0.49
LIMS4-203ENST00000632758 PODXL2Q9NZ53 605 aa18.13■□□□□ 0.49
LIMS4-203ENST00000632758 IFIT1P09914 478 aaKnown RBP18.12■□□□□ 0.49
LIMS4-203ENST00000632758 TXNRD3Q86VQ6 643 aa18.12■□□□□ 0.49
LIMS4-203ENST00000632758 TBC1D16Q8TBP0 767 aa18.12■□□□□ 0.49
LIMS4-203ENST00000632758 TMX4Q9H1E5 349 aaPredicted RBP18.12■□□□□ 0.49
LIMS4-203ENST00000632758 STAP2Q9UGK3 403 aa18.12■□□□□ 0.49
LIMS4-203ENST00000632758 GGA1Q9UJY5 639 aa18.12■□□□□ 0.49
LIMS4-203ENST00000632758 LEMD3Q9Y2U8 911 aa18.12■□□□□ 0.49
LIMS4-203ENST00000632758 SRCAPQ6ZRS2 3230 aa18.11■□□□□ 0.49
LIMS4-203ENST00000632758 UFL1O94874 794 aa18.11■□□□□ 0.49
LIMS4-203ENST00000632758 ATP2B4P23634 1241 aa18.11■□□□□ 0.49
LIMS4-203ENST00000632758 C6orf229H3BNL8 230 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms