RNA–Protein interactions for RNA: ENST00000629552.2

SOX2-OT-252, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 572 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-252ENST00000629552 VPS33BQ9H267 617 aa17.55■□□□□ 0.4
SOX2-OT-252ENST00000629552 GPRC5DQ9NZD1 345 aa17.55■□□□□ 0.4
SOX2-OT-252ENST00000629552 ANKIB1Q9P2G1 1089 aa17.55■□□□□ 0.4
SOX2-OT-252ENST00000629552 CCER2I3L3R5 266 aa17.54■□□□□ 0.4
SOX2-OT-252ENST00000629552 PSMD14O00487 310 aa17.54■□□□□ 0.4
SOX2-OT-252ENST00000629552 ECE2O60344 883 aa17.54■□□□□ 0.4
SOX2-OT-252ENST00000629552 LMOD1P29536 600 aaPredicted RBP17.54■□□□□ 0.4
SOX2-OT-252ENST00000629552 PODXL2Q9NZ53 605 aa17.54■□□□□ 0.4
SOX2-OT-252ENST00000629552 E9PSI1 815 aa17.53■□□□□ 0.4
SOX2-OT-252ENST00000629552 HSP90B1P14625 803 aaKnown RBP17.53■□□□□ 0.4
SOX2-OT-252ENST00000629552 SLC4A10Q6U841 1118 aa17.53■□□□□ 0.4
SOX2-OT-252ENST00000629552 MRPL50Q8N5N7 158 aaKnown RBP17.53■□□□□ 0.4
SOX2-OT-252ENST00000629552 TRPM4Q8TD43 1214 aa17.53■□□□□ 0.4
SOX2-OT-252ENST00000629552 SSH1Q8WYL5 1049 aa17.53■□□□□ 0.4
SOX2-OT-252ENST00000629552 MINPP1Q9UNW1 487 aa17.53■□□□□ 0.4
SOX2-OT-252ENST00000629552 SCN4AP35499 1836 aa17.53■□□□□ 0.4
SOX2-OT-252ENST00000629552 SNAP23O00161 211 aa17.52■□□□□ 0.4
SOX2-OT-252ENST00000629552 TRAF5O00463 557 aa17.52■□□□□ 0.4
SOX2-OT-252ENST00000629552 EGFRP00533 1210 aa17.52■□□□□ 0.4
SOX2-OT-252ENST00000629552 ITGA6P23229 1130 aa17.52■□□□□ 0.4
SOX2-OT-252ENST00000629552 KLRK1P26718 216 aa17.52■□□□□ 0.4
SOX2-OT-252ENST00000629552 HIRAP54198 1017 aaPredicted RBP17.52■□□□□ 0.4
SOX2-OT-252ENST00000629552 FOXO4P98177 505 aa17.52■□□□□ 0.4
SOX2-OT-252ENST00000629552 PNMA8AQ86V59 439 aaPredicted RBP17.52■□□□□ 0.4
SOX2-OT-252ENST00000629552 MIER1Q8N108 512 aa17.52■□□□□ 0.4
SOX2-OT-252ENST00000629552 CNTROBQ8N137 903 aa17.52■□□□□ 0.4
SOX2-OT-252ENST00000629552 CDC5LQ99459 802 aaKnown RBP17.52■□□□□ 0.4
SOX2-OT-252ENST00000629552 PLA2G12BQ9BX93 195 aa17.52■□□□□ 0.4
SOX2-OT-252ENST00000629552 GGA1Q9UJY5 639 aa17.52■□□□□ 0.4
SOX2-OT-252ENST00000629552 CSF1RP07333 972 aa17.51■□□□□ 0.39
SOX2-OT-252ENST00000629552 DLK2Q6UY11 383 aa17.51■□□□□ 0.39
SOX2-OT-252ENST00000629552 MKRN1Q9UHC7 482 aaKnown RBP17.51■□□□□ 0.39
SOX2-OT-252ENST00000629552 XDHP47989 1333 aa17.5■□□□□ 0.39
SOX2-OT-252ENST00000629552 TXNRD3Q86VQ6 643 aa17.5■□□□□ 0.39
SOX2-OT-252ENST00000629552 MICALL2Q8IY33 904 aa17.5■□□□□ 0.39
SOX2-OT-252ENST00000629552 EYA3Q99504 573 aa17.5■□□□□ 0.39
SOX2-OT-252ENST00000629552 BSDC1Q9NW68 430 aaPredicted RBP17.5■□□□□ 0.39
SOX2-OT-252ENST00000629552 TNIP1Q15025 636 aa17.49■□□□□ 0.39
SOX2-OT-252ENST00000629552 SAMD7Q7Z3H4 446 aa17.49■□□□□ 0.39
SOX2-OT-252ENST00000629552 TRMT2AQ8IZ69 625 aaKnown RBP17.49■□□□□ 0.39
SOX2-OT-252ENST00000629552 ZNF594Q96JF6 807 aaPredicted RBP17.49■□□□□ 0.39
SOX2-OT-252ENST00000629552 ZC3H12CQ9C0D7 883 aaKnown RBP17.49■□□□□ 0.39
SOX2-OT-252ENST00000629552 CREBZFQ9NS37 354 aa17.49■□□□□ 0.39
SOX2-OT-252ENST00000629552 ADARB2Q9NS39 739 aaKnown RBP17.49■□□□□ 0.39
SOX2-OT-252ENST00000629552 CNOT7Q9UIV1 285 aaKnown RBP17.49■□□□□ 0.39
SOX2-OT-252ENST00000629552 GRM8O00222 908 aa17.48■□□□□ 0.39
SOX2-OT-252ENST00000629552 LMBR1LQ6UX01 489 aa17.48■□□□□ 0.39
SOX2-OT-252ENST00000629552 USP50Q70EL3 339 aaPredicted RBP17.48■□□□□ 0.39
SOX2-OT-252ENST00000629552 JMYQ8N9B5 988 aa17.48■□□□□ 0.39
SOX2-OT-252ENST00000629552 HELBQ8NG08 1087 aaPredicted RBP17.48■□□□□ 0.39
SOX2-OT-252ENST00000629552 KAZALD1Q96I82 304 aa17.48■□□□□ 0.39
SOX2-OT-252ENST00000629552 SUCLG2Q96I99 432 aa17.48■□□□□ 0.39
SOX2-OT-252ENST00000629552 MXD3Q9BW11 206 aa17.48■□□□□ 0.39
SOX2-OT-252ENST00000629552 CHMP3Q9Y3E7 222 aa17.48■□□□□ 0.39
SOX2-OT-252ENST00000629552 NBPF7P0C2Y1 421 aaPredicted RBP17.47■□□□□ 0.39
SOX2-OT-252ENST00000629552 CCT4P50991 539 aaKnown RBP17.47■□□□□ 0.39
SOX2-OT-252ENST00000629552 TBC1D10BQ4KMP7 808 aaPredicted RBP17.47■□□□□ 0.39
SOX2-OT-252ENST00000629552 GLIS2Q9BZE0 524 aaPredicted RBP17.47■□□□□ 0.39
SOX2-OT-252ENST00000629552 SRCIN1Q9C0H9 1055 aa17.47■□□□□ 0.39
SOX2-OT-252ENST00000629552 PCNTO95613 3336 aa17.47■□□□□ 0.39
SOX2-OT-252ENST00000629552 ATP2B4P23634 1241 aa17.46■□□□□ 0.39
SOX2-OT-252ENST00000629552 IGHMBP2P38935 993 aaKnown RBP17.46■□□□□ 0.39
SOX2-OT-252ENST00000629552 SCN9AQ15858 1988 aa17.46■□□□□ 0.39
SOX2-OT-252ENST00000629552 ASTN2O75129 1339 aaPredicted RBP17.46■□□□□ 0.38
SOX2-OT-252ENST00000629552 SPEF2Q9C093 1822 aa17.45■□□□□ 0.38
SOX2-OT-252ENST00000629552 TMEM88BA6NKF7 163 aa17.45■□□□□ 0.38
SOX2-OT-252ENST00000629552 TAF5LO75529 589 aa17.45■□□□□ 0.38
SOX2-OT-252ENST00000629552 ALDH1L1O75891 902 aa17.45■□□□□ 0.38
SOX2-OT-252ENST00000629552 CHRNDQ07001 517 aa17.45■□□□□ 0.38
SOX2-OT-252ENST00000629552 RBM26Q5T8P6 1007 aaKnown RBP17.45■□□□□ 0.38
SOX2-OT-252ENST00000629552 DIEXFQ68CQ4 756 aaKnown RBP17.45■□□□□ 0.38
SOX2-OT-252ENST00000629552 C9orf78Q9NZ63 289 aaPredicted RBP17.45■□□□□ 0.38
SOX2-OT-252ENST00000629552 CNTNAP1P78357 1384 aa17.44■□□□□ 0.38
SOX2-OT-252ENST00000629552 ANKRD18BA2A2Z9 1011 aa17.44■□□□□ 0.38
SOX2-OT-252ENST00000629552 G3V3G9 751 aa17.44■□□□□ 0.38
SOX2-OT-252ENST00000629552 VIL1P09327 827 aaKnown RBP17.44■□□□□ 0.38
SOX2-OT-252ENST00000629552 DCAF8Q5TAQ9 597 aa17.44■□□□□ 0.38
SOX2-OT-252ENST00000629552 CST9Q5W186 159 aa17.44■□□□□ 0.38
SOX2-OT-252ENST00000629552 MPHOSPH8Q99549 860 aa17.44■□□□□ 0.38
SOX2-OT-252ENST00000629552 SMC4Q9NTJ3 1288 aa17.44■□□□□ 0.38
SOX2-OT-252ENST00000629552 MED23Q9ULK4 1368 aa17.43■□□□□ 0.38
SOX2-OT-252ENST00000629552 IFIT5Q13325 482 aaKnown RBP17.43■□□□□ 0.38
SOX2-OT-252ENST00000629552 DPF2Q92785 391 aa17.43■□□□□ 0.38
SOX2-OT-252ENST00000629552 PUS3Q9BZE2 481 aaKnown RBP17.43■□□□□ 0.38
SOX2-OT-252ENST00000629552 IRS2Q9Y4H2 1338 aa17.43■□□□□ 0.38
SOX2-OT-252ENST00000629552 VEGFBP49765 207 aa17.42■□□□□ 0.38
SOX2-OT-252ENST00000629552 ANKRD44Q8N8A2 993 aa17.42■□□□□ 0.38
SOX2-OT-252ENST00000629552 BICC1Q9H694 974 aaKnown RBP17.42■□□□□ 0.38
SOX2-OT-252ENST00000629552 ZNF804BA4D1E1 1349 aa17.42■□□□□ 0.38
SOX2-OT-252ENST00000629552 H7C1D1 291 aa17.41■□□□□ 0.38
SOX2-OT-252ENST00000629552 RSBN1LQ6PCB5 846 aaPredicted RBP17.41■□□□□ 0.38
SOX2-OT-252ENST00000629552 FBXW7Q969H0 707 aa17.41■□□□□ 0.38
SOX2-OT-252ENST00000629552 GMLQ99445 158 aa17.41■□□□□ 0.38
SOX2-OT-252ENST00000629552 PGAP2Q9UHJ9 254 aa17.41■□□□□ 0.38
SOX2-OT-252ENST00000629552 SCAF8Q9UPN6 1271 aaKnown RBP17.41■□□□□ 0.38
SOX2-OT-252ENST00000629552 UTYO14607 1347 aa17.41■□□□□ 0.38
SOX2-OT-252ENST00000629552 PTPRCP08575 1304 aa17.41■□□□□ 0.38
SOX2-OT-252ENST00000629552 MYH3P11055 1940 aa17.41■□□□□ 0.38
SOX2-OT-252ENST00000629552 ADM5C9JUS6 153 aa17.4■□□□□ 0.38
SOX2-OT-252ENST00000629552 PLIN1O60240 522 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms