RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 SLFN5Q08AF3 891 aa13.73□□□□□ -0.21
CHD2-217ENST00000629136 CIAPIN1Q6FI81 312 aa13.73□□□□□ -0.21
CHD2-217ENST00000629136 GPRC5DQ9NZD1 345 aa13.73□□□□□ -0.21
CHD2-217ENST00000629136 POLR2AP24928 1970 aaKnown RBP13.72□□□□□ -0.21
CHD2-217ENST00000629136 XDHP47989 1333 aa13.72□□□□□ -0.21
CHD2-217ENST00000629136 ECE2O60344 883 aa13.72□□□□□ -0.21
CHD2-217ENST00000629136 UFL1O94874 794 aa13.72□□□□□ -0.21
CHD2-217ENST00000629136 GMPSP49915 693 aaPredicted RBP13.72□□□□□ -0.21
CHD2-217ENST00000629136 FAM161AQ3B820 660 aa13.72□□□□□ -0.21
CHD2-217ENST00000629136 CDCA7LQ96GN5 454 aa13.72□□□□□ -0.21
CHD2-217ENST00000629136 CDC5LQ99459 802 aaKnown RBP13.72□□□□□ -0.21
CHD2-217ENST00000629136 EYA3Q99504 573 aa13.72□□□□□ -0.21
CHD2-217ENST00000629136 CLEC11AQ9Y240 323 aa13.72□□□□□ -0.21
CHD2-217ENST00000629136 THSD7BQ9C0I4 1608 aa13.72□□□□□ -0.21
CHD2-217ENST00000629136 CSF1RP07333 972 aa13.71□□□□□ -0.21
CHD2-217ENST00000629136 MAP1SQ66K74 1059 aaPredicted RBP13.71□□□□□ -0.21
CHD2-217ENST00000629136 USP50Q70EL3 339 aaPredicted RBP13.71□□□□□ -0.21
CHD2-217ENST00000629136 MRPL50Q8N5N7 158 aaKnown RBP13.71□□□□□ -0.21
CHD2-217ENST00000629136 ADARB2Q9NS39 739 aaKnown RBP13.71□□□□□ -0.21
CHD2-217ENST00000629136 BSDC1Q9NW68 430 aaPredicted RBP13.71□□□□□ -0.21
CHD2-217ENST00000629136 ANKIB1Q9P2G1 1089 aa13.71□□□□□ -0.21
CHD2-217ENST00000629136 GGA1Q9UJY5 639 aa13.71□□□□□ -0.21
CHD2-217ENST00000629136 ZNF609O15014 1411 aa13.71□□□□□ -0.22
CHD2-217ENST00000629136 ARAP2Q8WZ64 1704 aa13.7□□□□□ -0.22
CHD2-217ENST00000629136 SHTN1A0MZ66 631 aa13.7□□□□□ -0.22
CHD2-217ENST00000629136 WTIPA6NIX2 430 aaPredicted RBP13.7□□□□□ -0.22
CHD2-217ENST00000629136 PSMD14O00487 310 aa13.7□□□□□ -0.22
CHD2-217ENST00000629136 ITGA6P23229 1130 aa13.7□□□□□ -0.22
CHD2-217ENST00000629136 TNIP1Q15025 636 aa13.7□□□□□ -0.22
CHD2-217ENST00000629136 DOK7Q18PE1 504 aa13.7□□□□□ -0.22
CHD2-217ENST00000629136 TRMT2AQ8IZ69 625 aaKnown RBP13.7□□□□□ -0.22
CHD2-217ENST00000629136 JMYQ8N9B5 988 aa13.7□□□□□ -0.22
CHD2-217ENST00000629136 KCNQ5Q9NR82 932 aa13.7□□□□□ -0.22
CHD2-217ENST00000629136 CREBZFQ9NS37 354 aa13.7□□□□□ -0.22
CHD2-217ENST00000629136 MINPP1Q9UNW1 487 aa13.7□□□□□ -0.22
CHD2-217ENST00000629136 MED23Q9ULK4 1368 aa13.7□□□□□ -0.22
CHD2-217ENST00000629136 ECM29Q5VYK3 1845 aa13.69□□□□□ -0.22
CHD2-217ENST00000629136 FOXO4P98177 505 aa13.69□□□□□ -0.22
CHD2-217ENST00000629136 CNTROBQ8N137 903 aa13.69□□□□□ -0.22
CHD2-217ENST00000629136 SSH1Q8WYL5 1049 aa13.69□□□□□ -0.22
CHD2-217ENST00000629136 BCL2L13Q9BXK5 485 aa13.69□□□□□ -0.22
CHD2-217ENST00000629136 ZC3H12CQ9C0D7 883 aaKnown RBP13.69□□□□□ -0.22
CHD2-217ENST00000629136 ZBTB12Q9Y330 459 aaPredicted RBP13.69□□□□□ -0.22
CHD2-217ENST00000629136 GRM8O00222 908 aa13.68□□□□□ -0.22
CHD2-217ENST00000629136 ALDH1L1O75891 902 aa13.68□□□□□ -0.22
CHD2-217ENST00000629136 IGHMBP2P38935 993 aaKnown RBP13.68□□□□□ -0.22
CHD2-217ENST00000629136 EPHA10Q5JZY3 1008 aa13.68□□□□□ -0.22
CHD2-217ENST00000629136 SLC4A10Q6U841 1118 aa13.68□□□□□ -0.22
CHD2-217ENST00000629136 TRPM4Q8TD43 1214 aa13.68□□□□□ -0.22
CHD2-217ENST00000629136 SRCIN1Q9C0H9 1055 aa13.68□□□□□ -0.22
CHD2-217ENST00000629136 PTPRCP08575 1304 aa13.67□□□□□ -0.22
CHD2-217ENST00000629136 ATP2B4P23634 1241 aa13.67□□□□□ -0.22
CHD2-217ENST00000629136 CCT4P50991 539 aaKnown RBP13.67□□□□□ -0.22
CHD2-217ENST00000629136 HIRAP54198 1017 aaPredicted RBP13.67□□□□□ -0.22
CHD2-217ENST00000629136 FMR1Q06787 632 aaKnown RBP eCLIP13.67□□□□□ -0.22
CHD2-217ENST00000629136 MICALL2Q8IY33 904 aa13.67□□□□□ -0.22
CHD2-217ENST00000629136 CNOT7Q9UIV1 285 aaKnown RBP13.67□□□□□ -0.22
CHD2-217ENST00000629136 CNTNAP1P78357 1384 aa13.67□□□□□ -0.22
CHD2-217ENST00000629136 TMEM88BA6NKF7 163 aa13.66□□□□□ -0.22
CHD2-217ENST00000629136 DPF2Q92785 391 aa13.66□□□□□ -0.22
CHD2-217ENST00000629136 MYH13Q9UKX3 1938 aa13.66□□□□□ -0.22
CHD2-217ENST00000629136 UTYO14607 1347 aa13.65□□□□□ -0.22
CHD2-217ENST00000629136 ANKRD18BA2A2Z9 1011 aa13.65□□□□□ -0.22
CHD2-217ENST00000629136 EGFRP00533 1210 aa13.65□□□□□ -0.22
CHD2-217ENST00000629136 VIL1P09327 827 aaKnown RBP13.65□□□□□ -0.22
CHD2-217ENST00000629136 RPS12P25398 132 aaKnown RBP13.65□□□□□ -0.22
CHD2-217ENST00000629136 ALDH1L2Q3SY69 923 aa13.65□□□□□ -0.22
CHD2-217ENST00000629136 LMBR1LQ6UX01 489 aa13.65□□□□□ -0.22
CHD2-217ENST00000629136 TXNRD3Q86VQ6 643 aa13.65□□□□□ -0.22
CHD2-217ENST00000629136 KAZALD1Q96I82 304 aa13.65□□□□□ -0.22
CHD2-217ENST00000629136 SUCLG2Q96I99 432 aa13.65□□□□□ -0.22
CHD2-217ENST00000629136 MPHOSPH8Q99549 860 aa13.65□□□□□ -0.22
CHD2-217ENST00000629136 C9orf78Q9NZ63 289 aaPredicted RBP13.65□□□□□ -0.22
CHD2-217ENST00000629136 MKRN1Q9UHC7 482 aaKnown RBP13.65□□□□□ -0.22
CHD2-217ENST00000629136 PGAP2Q9UHJ9 254 aa13.65□□□□□ -0.22
CHD2-217ENST00000629136 IRS2Q9Y4H2 1338 aa13.64□□□□□ -0.23
CHD2-217ENST00000629136 TRAF5O00463 557 aa13.64□□□□□ -0.23
CHD2-217ENST00000629136 NBPF7P0C2Y1 421 aaPredicted RBP13.64□□□□□ -0.23
CHD2-217ENST00000629136 KLRK1P26718 216 aa13.64□□□□□ -0.23
CHD2-217ENST00000629136 CHRNDQ07001 517 aa13.64□□□□□ -0.23
CHD2-217ENST00000629136 IFIT5Q13325 482 aaKnown RBP13.64□□□□□ -0.23
CHD2-217ENST00000629136 SAMD7Q7Z3H4 446 aa13.64□□□□□ -0.23
CHD2-217ENST00000629136 LEMD3Q9Y2U8 911 aa13.64□□□□□ -0.23
CHD2-217ENST00000629136 CHMP3Q9Y3E7 222 aa13.64□□□□□ -0.23
CHD2-217ENST00000629136 ZNF804BA4D1E1 1349 aa13.64□□□□□ -0.23
CHD2-217ENST00000629136 G3V3G9 751 aa13.63□□□□□ -0.23
CHD2-217ENST00000629136 H7C1D1 291 aa13.63□□□□□ -0.23
CHD2-217ENST00000629136 TBC1D10BQ4KMP7 808 aaPredicted RBP13.63□□□□□ -0.23
CHD2-217ENST00000629136 DCAF8Q5TAQ9 597 aa13.63□□□□□ -0.23
CHD2-217ENST00000629136 DIEXFQ68CQ4 756 aaKnown RBP13.63□□□□□ -0.23
CHD2-217ENST00000629136 RSBN1LQ6PCB5 846 aaPredicted RBP13.63□□□□□ -0.23
CHD2-217ENST00000629136 PODNQ7Z5L7 613 aa13.63□□□□□ -0.23
CHD2-217ENST00000629136 MIER1Q8N108 512 aa13.63□□□□□ -0.23
CHD2-217ENST00000629136 ZC3H15Q8WU90 426 aaKnown RBP13.63□□□□□ -0.23
CHD2-217ENST00000629136 ZNF594Q96JF6 807 aaPredicted RBP13.63□□□□□ -0.23
CHD2-217ENST00000629136 ANKRD2Q9GZV1 360 aa13.63□□□□□ -0.23
CHD2-217ENST00000629136 SMC4Q9NTJ3 1288 aa13.63□□□□□ -0.23
CHD2-217ENST00000629136 SNAP23O00161 211 aa13.62□□□□□ -0.23
CHD2-217ENST00000629136 CT47B1P0C2W7 299 aaPredicted RBP13.62□□□□□ -0.23
CHD2-217ENST00000629136 GMLQ99445 158 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms