RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 SMG9Q9H0W8 520 aaKnown RBP4.6□□□□□ -1.67
SCARNA4-201ENST00000629045 FOXD3Q9UJU5 478 aaPredicted RBP4.6□□□□□ -1.67
SCARNA4-201ENST00000629045 LOC102724428A0A0B4J2F2 783 aa4.59□□□□□ -1.67
SCARNA4-201ENST00000629045 RGS9O75916 674 aaPredicted RBP4.59□□□□□ -1.67
SCARNA4-201ENST00000629045 GDF11O95390 407 aa4.59□□□□□ -1.67
SCARNA4-201ENST00000629045 HOXD8P13378 290 aaPredicted RBP4.59□□□□□ -1.67
SCARNA4-201ENST00000629045 ACPPP15309 386 aa4.59□□□□□ -1.67
SCARNA4-201ENST00000629045 SIK1P57059 783 aa4.59□□□□□ -1.67
SCARNA4-201ENST00000629045 ELMSAN1Q6PJG2 1045 aa4.59□□□□□ -1.67
SCARNA4-201ENST00000629045 GJD3Q8N144 294 aa4.59□□□□□ -1.67
SCARNA4-201ENST00000629045 TMEM151AQ8N4L1 468 aa4.59□□□□□ -1.67
SCARNA4-201ENST00000629045 C1orf127Q8N9H9 656 aa4.59□□□□□ -1.67
SCARNA4-201ENST00000629045 PLD4Q96BZ4 506 aa4.59□□□□□ -1.67
SCARNA4-201ENST00000629045 DCAF5Q96JK2 942 aa4.59□□□□□ -1.67
SCARNA4-201ENST00000629045 TRAIPQ9BWF2 469 aa4.59□□□□□ -1.67
SCARNA4-201ENST00000629045 CHRDQ9H2X0 955 aa4.59□□□□□ -1.67
SCARNA4-201ENST00000629045 BIN2Q9UBW5 565 aaPredicted RBP4.59□□□□□ -1.67
SCARNA4-201ENST00000629045 GNEQ9Y223 722 aaKnown RBP4.59□□□□□ -1.67
SCARNA4-201ENST00000629045 TNFRSF21O75509 655 aa4.58□□□□□ -1.68
SCARNA4-201ENST00000629045 GHRHP01286 108 aa4.58□□□□□ -1.68
SCARNA4-201ENST00000629045 GRIK5Q16478 980 aa4.58□□□□□ -1.68
SCARNA4-201ENST00000629045 PCSK7Q16549 785 aa4.58□□□□□ -1.68
SCARNA4-201ENST00000629045 ADAMTSL4Q6UY14 1074 aa4.58□□□□□ -1.68
SCARNA4-201ENST00000629045 KCTD17Q8N5Z5 321 aa4.58□□□□□ -1.68
SCARNA4-201ENST00000629045 TTC16Q8NEE8 873 aa4.58□□□□□ -1.68
SCARNA4-201ENST00000629045 PRDM6Q9NQX0 595 aa4.58□□□□□ -1.68
SCARNA4-201ENST00000629045 BRPF3Q9ULD4 1205 aa4.58□□□□□ -1.68
SCARNA4-201ENST00000629045 TRIM33Q9UPN9 1127 aa4.58□□□□□ -1.68
SCARNA4-201ENST00000629045 KRBA1A5PL33 1030 aa4.57□□□□□ -1.68
SCARNA4-201ENST00000629045 EREGO14944 169 aa4.57□□□□□ -1.68
SCARNA4-201ENST00000629045 GPR182O15218 404 aa4.57□□□□□ -1.68
SCARNA4-201ENST00000629045 NDUFB5O43674 189 aa4.57□□□□□ -1.68
SCARNA4-201ENST00000629045 PHACTR2O75167 634 aa4.57□□□□□ -1.68
SCARNA4-201ENST00000629045 TRPA1O75762 1119 aa4.57□□□□□ -1.68
SCARNA4-201ENST00000629045 ITGB2P05107 769 aa4.57□□□□□ -1.68
SCARNA4-201ENST00000629045 RPLP1P05386 114 aaKnown RBP4.57□□□□□ -1.68
SCARNA4-201ENST00000629045 USP5P45974 858 aa4.57□□□□□ -1.68
SCARNA4-201ENST00000629045 KCNA1Q09470 495 aa4.57□□□□□ -1.68
SCARNA4-201ENST00000629045 HYAL2Q12891 473 aa4.57□□□□□ -1.68
SCARNA4-201ENST00000629045 GDF6Q6KF10 455 aaPredicted RBP4.57□□□□□ -1.68
SCARNA4-201ENST00000629045 NCAPG2Q86XI2 1143 aa4.57□□□□□ -1.68
SCARNA4-201ENST00000629045 SNX29Q8TEQ0 813 aa4.57□□□□□ -1.68
SCARNA4-201ENST00000629045 HHIPQ96QV1 700 aa4.57□□□□□ -1.68
SCARNA4-201ENST00000629045 RASSF4Q9H2L5 321 aa4.57□□□□□ -1.68
SCARNA4-201ENST00000629045 NOP53Q9NZM5 478 aaKnown RBP4.57□□□□□ -1.68
SCARNA4-201ENST00000629045 FRRS1LQ9P0K9 344 aa4.57□□□□□ -1.68
SCARNA4-201ENST00000629045 PIK3R2O00459 728 aa4.56□□□□□ -1.68
SCARNA4-201ENST00000629045 KIF4AO95239 1232 aa4.56□□□□□ -1.68
SCARNA4-201ENST00000629045 POLR3DP05423 398 aaPredicted RBP4.56□□□□□ -1.68
SCARNA4-201ENST00000629045 PDIA4P13667 645 aaKnown RBP4.56□□□□□ -1.68
SCARNA4-201ENST00000629045 CES1P23141 567 aa4.56□□□□□ -1.68
SCARNA4-201ENST00000629045 ORC1Q13415 861 aa4.56□□□□□ -1.68
SCARNA4-201ENST00000629045 TRAPPC3LQ5T215 181 aa4.56□□□□□ -1.68
SCARNA4-201ENST00000629045 XKR5Q6UX68 686 aa4.56□□□□□ -1.68
SCARNA4-201ENST00000629045 AEBP1Q8IUX7 1158 aa4.56□□□□□ -1.68
SCARNA4-201ENST00000629045 DMRTC2Q8IXT2 367 aaPredicted RBP4.56□□□□□ -1.68
SCARNA4-201ENST00000629045 LATS2Q9NRM7 1088 aa4.56□□□□□ -1.68
SCARNA4-201ENST00000629045 A0A0A0MRY4 1105 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 IGHA2P01877 340 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 CHRNA4P43681 627 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 BAG6P46379 1132 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 EHHADHQ08426 723 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 GRIK4Q16099 956 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 PLA2G4EQ3MJ16 856 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 USPL1Q5W0Q7 1092 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 CEP135Q66GS9 1140 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 MSL1Q68DK7 614 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 GPAT2Q6NUI2 795 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 TXNDC11Q6PKC3 985 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 WFDC8Q8IUA0 241 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 CEP120Q8N960 986 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 TMC1Q8TDI8 760 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 SPACA7Q96KW9 195 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 FAM129BQ96TA1 746 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 LACRTQ9GZZ8 138 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 RBSNQ9H1K0 784 aa4.55□□□□□ -1.68
SCARNA4-201ENST00000629045 SPATA31C1P0DKV0 1188 aa4.54□□□□□ -1.68
SCARNA4-201ENST00000629045 MAPK1P28482 360 aa4.54□□□□□ -1.68
SCARNA4-201ENST00000629045 CDC25BP30305 580 aa4.54□□□□□ -1.68
SCARNA4-201ENST00000629045 PRRT3Q5FWE3 981 aa4.54□□□□□ -1.68
SCARNA4-201ENST00000629045 TMC7Q7Z402 723 aa4.54□□□□□ -1.68
SCARNA4-201ENST00000629045 IL22RA1Q8N6P7 574 aa4.54□□□□□ -1.68
SCARNA4-201ENST00000629045 PBX4Q9BYU1 374 aa4.54□□□□□ -1.68
SCARNA4-201ENST00000629045 SALL4Q9UJQ4 1053 aa4.54□□□□□ -1.68
SCARNA4-201ENST00000629045 AMOTL2Q9Y2J4 779 aa4.54□□□□□ -1.68
SCARNA4-201ENST00000629045 SPDYE3A6NKU9 549 aa4.53□□□□□ -1.68
SCARNA4-201ENST00000629045 DEAF1O75398 565 aaPredicted RBP4.53□□□□□ -1.68
SCARNA4-201ENST00000629045 SMNDC1O75940 238 aaKnown RBP eCLIP4.53□□□□□ -1.68not detected■■■□□ 18.4
SCARNA4-201ENST00000629045 EPHA1P21709 976 aa4.53□□□□□ -1.68
SCARNA4-201ENST00000629045 TRIM28Q13263 835 aaKnown RBP4.53□□□□□ -1.68
SCARNA4-201ENST00000629045 PEAR1Q5VY43 1037 aaPredicted RBP4.53□□□□□ -1.68
SCARNA4-201ENST00000629045 SHISA2Q6UWI4 295 aa4.53□□□□□ -1.68
SCARNA4-201ENST00000629045 CD163Q86VB7 1156 aa4.53□□□□□ -1.68
SCARNA4-201ENST00000629045 FMR1NBQ8N0W7 255 aaPredicted RBP4.53□□□□□ -1.68
SCARNA4-201ENST00000629045 TTC9Q92623 222 aa4.53□□□□□ -1.68
SCARNA4-201ENST00000629045 ZKSCAN3Q9BRR0 538 aa4.53□□□□□ -1.68
SCARNA4-201ENST00000629045 RBCK1Q9BYM8 510 aa4.53□□□□□ -1.68
SCARNA4-201ENST00000629045 NIF3L1Q9GZT8 377 aa4.53□□□□□ -1.68
SCARNA4-201ENST00000629045 SH2B1Q9NRF2 756 aaPredicted RBP4.53□□□□□ -1.68
SCARNA4-201ENST00000629045 DZANK1Q9NVP4 752 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms