RNA–Protein interactions for RNA: ENST00000627450.2

PDXDC1-218, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-218ENST00000627450 ADORA1P30542 326 aa16.5■□□□□ 0.23
PDXDC1-218ENST00000627450 EDC3Q96F86 508 aaKnown RBP16.5■□□□□ 0.23
PDXDC1-218ENST00000627450 POLRMTO00411 1230 aaKnown RBP16.5■□□□□ 0.23
PDXDC1-218ENST00000627450 GLRX3O76003 335 aaKnown RBP16.5■□□□□ 0.23
PDXDC1-218ENST00000627450 GPATCH3Q96I76 525 aa16.5■□□□□ 0.23
PDXDC1-218ENST00000627450 TNRC6CQ9HCJ0 1690 aaKnown RBP16.49■□□□□ 0.23
PDXDC1-218ENST00000627450 AOX1Q06278 1338 aa16.49■□□□□ 0.23
PDXDC1-218ENST00000627450 RGPD3A6NKT7 1758 aaPredicted RBP16.49■□□□□ 0.23
PDXDC1-218ENST00000627450 RGPD4Q7Z3J3 1758 aa16.49■□□□□ 0.23
PDXDC1-218ENST00000627450 WTIPA6NIX2 430 aaPredicted RBP16.49■□□□□ 0.23
PDXDC1-218ENST00000627450 ERC2O15083 957 aa16.49■□□□□ 0.23
PDXDC1-218ENST00000627450 VGLL2Q8N8G2 317 aa16.49■□□□□ 0.23
PDXDC1-218ENST00000627450 FBXO3Q9UK99 471 aa16.49■□□□□ 0.23
PDXDC1-218ENST00000627450 ZNF609O15014 1411 aa16.48■□□□□ 0.23
PDXDC1-218ENST00000627450 IGHMBP2P38935 993 aaKnown RBP16.48■□□□□ 0.23
PDXDC1-218ENST00000627450 PDE8BO95263 885 aa16.47■□□□□ 0.23
PDXDC1-218ENST00000627450 XAGE2Q96GT9 111 aa16.47■□□□□ 0.23
PDXDC1-218ENST00000627450 STK32BQ9NY57 414 aa16.47■□□□□ 0.23
PDXDC1-218ENST00000627450 RTL9Q8NET4 1388 aa16.47■□□□□ 0.23
PDXDC1-218ENST00000627450 MMP10P09238 476 aa16.47■□□□□ 0.23
PDXDC1-218ENST00000627450 HMGB2P26583 209 aaKnown RBP16.47■□□□□ 0.23
PDXDC1-218ENST00000627450 ANKRD18AQ8IVF6 992 aa16.47■□□□□ 0.23
PDXDC1-218ENST00000627450 NLGN1Q8N2Q7 840 aa16.47■□□□□ 0.23
PDXDC1-218ENST00000627450 CDC5LQ99459 802 aaKnown RBP16.47■□□□□ 0.23
PDXDC1-218ENST00000627450 GPR108Q9NPR9 543 aa16.47■□□□□ 0.23
PDXDC1-218ENST00000627450 ATP2B3Q16720 1220 aa16.46■□□□□ 0.23
PDXDC1-218ENST00000627450 FLAD1Q8NFF5 587 aa16.46■□□□□ 0.23
PDXDC1-218ENST00000627450 DNAJC2Q99543 621 aaKnown RBP16.46■□□□□ 0.23
PDXDC1-218ENST00000627450 IL25Q9H293 177 aa16.46■□□□□ 0.23
PDXDC1-218ENST00000627450 AK9Q5TCS8 1911 aa16.45■□□□□ 0.22
PDXDC1-218ENST00000627450 CHRNDQ07001 517 aa16.45■□□□□ 0.22
PDXDC1-218ENST00000627450 AKAP2Q9Y2D5 859 aa16.45■□□□□ 0.22
PDXDC1-218ENST00000627450 ST5P78524 1137 aa16.45■□□□□ 0.22
PDXDC1-218ENST00000627450 CNTROBQ8N137 903 aa16.45■□□□□ 0.22
PDXDC1-218ENST00000627450 LRP5O75197 1615 aa16.45■□□□□ 0.22
PDXDC1-218ENST00000627450 CHGBP05060 677 aa16.44■□□□□ 0.22
PDXDC1-218ENST00000627450 ATP5JP18859 108 aa16.44■□□□□ 0.22
PDXDC1-218ENST00000627450 CHMLP26374 656 aa16.44■□□□□ 0.22
PDXDC1-218ENST00000627450 RPS8P62241 208 aaKnown RBP16.44■□□□□ 0.22
PDXDC1-218ENST00000627450 GORABQ5T7V8 394 aa16.44■□□□□ 0.22
PDXDC1-218ENST00000627450 MROH5Q6ZUA9 1318 aa16.44■□□□□ 0.22
PDXDC1-218ENST00000627450 DDX46Q7L014 1031 aaKnown RBP16.44■□□□□ 0.22
PDXDC1-218ENST00000627450 SCARF1Q14162 830 aa16.43■□□□□ 0.22
PDXDC1-218ENST00000627450 PI16Q6UXB8 463 aa16.43■□□□□ 0.22
PDXDC1-218ENST00000627450 SNRKQ9NRH2 765 aa16.43■□□□□ 0.22
PDXDC1-218ENST00000627450 UPF2Q9HAU5 1272 aaKnown RBP16.43■□□□□ 0.22
PDXDC1-218ENST00000627450 BSDC1Q9NW68 430 aaPredicted RBP16.43■□□□□ 0.22
PDXDC1-218ENST00000627450 MINPP1Q9UNW1 487 aa16.43■□□□□ 0.22
PDXDC1-218ENST00000627450 FGFR2P21802 821 aa16.42■□□□□ 0.22
PDXDC1-218ENST00000627450 PUM3Q15397 648 aaKnown RBP16.42■□□□□ 0.22
PDXDC1-218ENST00000627450 CASC1Q6TDU7 716 aa16.42■□□□□ 0.22
PDXDC1-218ENST00000627450 CWC27Q6UX04 472 aaKnown RBP16.42■□□□□ 0.22
PDXDC1-218ENST00000627450 TBC1D32Q96NH3 1257 aa16.42■□□□□ 0.22
PDXDC1-218ENST00000627450 IFIT1P09914 478 aaKnown RBP16.41■□□□□ 0.22
PDXDC1-218ENST00000627450 PHKA1P46020 1223 aa16.41■□□□□ 0.22
PDXDC1-218ENST00000627450 FKBP4Q02790 459 aaKnown RBP eCLIP16.41■□□□□ 0.22
PDXDC1-218ENST00000627450 TTC39AQ5SRH9 613 aa16.41■□□□□ 0.22
PDXDC1-218ENST00000627450 EVI5LQ96CN4 794 aa16.41■□□□□ 0.22
PDXDC1-218ENST00000627450 C22orf23Q9BZE7 217 aa16.41■□□□□ 0.22
PDXDC1-218ENST00000627450 ANTXR1Q9H6X2 564 aa16.41■□□□□ 0.22
PDXDC1-218ENST00000627450 PARP3Q9Y6F1 533 aa16.41■□□□□ 0.22
PDXDC1-218ENST00000627450 GOLIM4O00461 696 aa16.41■□□□□ 0.22
PDXDC1-218ENST00000627450 SLFNL1Q499Z3 407 aa16.41■□□□□ 0.22
PDXDC1-218ENST00000627450 CCDC158Q5M9N0 1113 aa16.41■□□□□ 0.22
PDXDC1-218ENST00000627450 LPIN2Q92539 896 aa16.41■□□□□ 0.22
PDXDC1-218ENST00000627450 RPGRQ92834 1020 aaKnown RBP16.41■□□□□ 0.22
PDXDC1-218ENST00000627450 HAUS7Q99871 368 aa16.41■□□□□ 0.22
PDXDC1-218ENST00000627450 ANP32AP39687 249 aaKnown RBP16.4■□□□□ 0.22
PDXDC1-218ENST00000627450 CRY2Q49AN0 593 aa16.4■□□□□ 0.22
PDXDC1-218ENST00000627450 ESYT1Q9BSJ8 1104 aa16.4■□□□□ 0.22
PDXDC1-218ENST00000627450 FSD1Q9BTV5 496 aa16.4■□□□□ 0.22
PDXDC1-218ENST00000627450 CCDC102BQ68D86 513 aa16.4■□□□□ 0.22
PDXDC1-218ENST00000627450 FAM227BQ96M60 508 aa16.39■□□□□ 0.21
PDXDC1-218ENST00000627450 KLRK1P26718 216 aa16.39■□□□□ 0.21
PDXDC1-218ENST00000627450 MCAMP43121 646 aa16.39■□□□□ 0.21
PDXDC1-218ENST00000627450 BCAMP50895 628 aa16.39■□□□□ 0.21
PDXDC1-218ENST00000627450 GRAPQ13588 217 aa16.39■□□□□ 0.21
PDXDC1-218ENST00000627450 GRAPLQ8TC17 118 aaPredicted RBP16.39■□□□□ 0.21
PDXDC1-218ENST00000627450 ANKRD31Q8N7Z5 1873 aa16.38■□□□□ 0.21
PDXDC1-218ENST00000627450 PAG1Q9NWQ8 432 aa16.38■□□□□ 0.21
PDXDC1-218ENST00000627450 IQSEC3Q9UPP2 1182 aaPredicted RBP16.38■□□□□ 0.21
PDXDC1-218ENST00000627450 SLC5A1P13866 664 aa16.38■□□□□ 0.21
PDXDC1-218ENST00000627450 ZAP70P43403 619 aa16.38■□□□□ 0.21
PDXDC1-218ENST00000627450 DIAPH3Q9NSV4 1193 aa16.38■□□□□ 0.21
PDXDC1-218ENST00000627450 GYG1P46976 350 aa16.37■□□□□ 0.21
PDXDC1-218ENST00000627450 BRIP1Q9BX63 1249 aa16.37■□□□□ 0.21
PDXDC1-218ENST00000627450 USP26Q9BXU7 913 aa16.37■□□□□ 0.21
PDXDC1-218ENST00000627450 ANO2Q9NQ90 1003 aa16.37■□□□□ 0.21
PDXDC1-218ENST00000627450 CCDC125Q86Z20 511 aa16.36■□□□□ 0.21
PDXDC1-218ENST00000627450 A0A0D9SFI3 127 aa16.36■□□□□ 0.21
PDXDC1-218ENST00000627450 NMIQ13287 307 aaPredicted RBP16.36■□□□□ 0.21
PDXDC1-218ENST00000627450 A0A1B0GUL6 1792 aa16.36■□□□□ 0.21
PDXDC1-218ENST00000627450 NRXN2Q9P2S2 1712 aa16.35■□□□□ 0.21
PDXDC1-218ENST00000627450 KLRG2A4D1S0 409 aaPredicted RBP16.35■□□□□ 0.21
PDXDC1-218ENST00000627450 OLFM4Q6UX06 510 aa16.35■□□□□ 0.21
PDXDC1-218ENST00000627450 RBM17Q96I25 401 aaKnown RBP16.35■□□□□ 0.21
PDXDC1-218ENST00000627450 GPR101Q96P66 508 aaPredicted RBP16.35■□□□□ 0.21
PDXDC1-218ENST00000627450 ANKIB1Q9P2G1 1089 aa16.35■□□□□ 0.21
PDXDC1-218ENST00000627450 AKAP11Q9UKA4 1901 aa16.35■□□□□ 0.21
PDXDC1-218ENST00000627450 SGSM2O43147 1006 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms