RNA–Protein interactions for RNA: ENST00000625664.2

USP8-219, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5 BASIC

Gene USP8, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-219ENST00000625664 CLEC11AQ9Y240 323 aa16■□□□□ 0.15
USP8-219ENST00000625664 EPS15P42566 896 aa15.99■□□□□ 0.15
USP8-219ENST00000625664 CIAPIN1Q6FI81 312 aa15.99■□□□□ 0.15
USP8-219ENST00000625664 TRMT2AQ8IZ69 625 aaKnown RBP15.99■□□□□ 0.15
USP8-219ENST00000625664 EYA3Q99504 573 aa15.99■□□□□ 0.15
USP8-219ENST00000625664 SRCIN1Q9C0H9 1055 aa15.99■□□□□ 0.15
USP8-219ENST00000625664 PODXL2Q9NZ53 605 aa15.99■□□□□ 0.15
USP8-219ENST00000625664 GGA1Q9UJY5 639 aa15.99■□□□□ 0.15
USP8-219ENST00000625664 ITGA6P23229 1130 aa15.98■□□□□ 0.15
USP8-219ENST00000625664 DOK7Q18PE1 504 aa15.98■□□□□ 0.15
USP8-219ENST00000625664 GRM8O00222 908 aa15.97■□□□□ 0.15
USP8-219ENST00000625664 ALDH1L1O75891 902 aa15.97■□□□□ 0.15
USP8-219ENST00000625664 CSF1RP07333 972 aa15.97■□□□□ 0.15
USP8-219ENST00000625664 GMPSP49915 693 aaPredicted RBP15.97■□□□□ 0.15
USP8-219ENST00000625664 PNMA8AQ86V59 439 aaPredicted RBP15.97■□□□□ 0.15
USP8-219ENST00000625664 ZC3H12CQ9C0D7 883 aaKnown RBP15.97■□□□□ 0.15
USP8-219ENST00000625664 BSDC1Q9NW68 430 aaPredicted RBP15.97■□□□□ 0.15
USP8-219ENST00000625664 C9orf78Q9NZ63 289 aaPredicted RBP15.97■□□□□ 0.15
USP8-219ENST00000625664 CHMP3Q9Y3E7 222 aa15.97■□□□□ 0.15
USP8-219ENST00000625664 XDHP47989 1333 aa15.97■□□□□ 0.15
USP8-219ENST00000625664 ECE2O60344 883 aa15.96■□□□□ 0.15
USP8-219ENST00000625664 IGHMBP2P38935 993 aaKnown RBP15.96■□□□□ 0.15
USP8-219ENST00000625664 SMC4Q9NTJ3 1288 aa15.96■□□□□ 0.15
USP8-219ENST00000625664 MINPP1Q9UNW1 487 aa15.96■□□□□ 0.15
USP8-219ENST00000625664 FOXO4P98177 505 aa15.96■□□□□ 0.14
USP8-219ENST00000625664 TNIP1Q15025 636 aa15.96■□□□□ 0.14
USP8-219ENST00000625664 EPHA10Q5JZY3 1008 aa15.96■□□□□ 0.14
USP8-219ENST00000625664 GPRC5DQ9NZD1 345 aa15.96■□□□□ 0.14
USP8-219ENST00000625664 PTPRCP08575 1304 aa15.95■□□□□ 0.14
USP8-219ENST00000625664 ADAMTSL1Q8N6G6 1762 aa15.95■□□□□ 0.14
USP8-219ENST00000625664 WTIPA6NIX2 430 aaPredicted RBP15.95■□□□□ 0.14
USP8-219ENST00000625664 G3V3G9 751 aa15.95■□□□□ 0.14
USP8-219ENST00000625664 ATP2B4P23634 1241 aa15.95■□□□□ 0.14
USP8-219ENST00000625664 ALDH1L2Q3SY69 923 aa15.95■□□□□ 0.14
USP8-219ENST00000625664 DCAF8Q5TAQ9 597 aa15.95■□□□□ 0.14
USP8-219ENST00000625664 MAP1SQ66K74 1059 aaPredicted RBP15.95■□□□□ 0.14
USP8-219ENST00000625664 LMBR1LQ6UX01 489 aa15.95■□□□□ 0.14
USP8-219ENST00000625664 MPHOSPH8Q99549 860 aa15.95■□□□□ 0.14
USP8-219ENST00000625664 KCNQ5Q9NR82 932 aa15.95■□□□□ 0.14
USP8-219ENST00000625664 ANKRD18BA2A2Z9 1011 aa15.94■□□□□ 0.14
USP8-219ENST00000625664 PSMD14O00487 310 aa15.94■□□□□ 0.14
USP8-219ENST00000625664 DNAJC5GQ8N7S2 189 aa15.94■□□□□ 0.14
USP8-219ENST00000625664 ZBTB12Q9Y330 459 aaPredicted RBP15.94■□□□□ 0.14
USP8-219ENST00000625664 HNRNPUQ00839 825 aaKnown RBP eCLIP15.93■□□□□ 0.14
USP8-219ENST00000625664 ADARB2Q9NS39 739 aaKnown RBP15.93■□□□□ 0.14
USP8-219ENST00000625664 SHTN1A0MZ66 631 aa15.92■□□□□ 0.14
USP8-219ENST00000625664 CT47B1P0C2W7 299 aaPredicted RBP15.92■□□□□ 0.14
USP8-219ENST00000625664 NBPF7P0C2Y1 421 aaPredicted RBP15.92■□□□□ 0.14
USP8-219ENST00000625664 CCT4P50991 539 aaKnown RBP15.92■□□□□ 0.14
USP8-219ENST00000625664 IFIT5Q13325 482 aaKnown RBP15.92■□□□□ 0.14
USP8-219ENST00000625664 SUCLG2Q96I99 432 aa15.92■□□□□ 0.14
USP8-219ENST00000625664 SCN9AQ15858 1988 aa15.92■□□□□ 0.14
USP8-219ENST00000625664 ITGBL1O95965 494 aaPredicted RBP15.92■□□□□ 0.14
USP8-219ENST00000625664 USP50Q70EL3 339 aaPredicted RBP15.92■□□□□ 0.14
USP8-219ENST00000625664 CNTROBQ8N137 903 aa15.92■□□□□ 0.14
USP8-219ENST00000625664 CNOT7Q9UIV1 285 aaKnown RBP15.92■□□□□ 0.14
USP8-219ENST00000625664 PASKQ96RG2 1323 aa15.91■□□□□ 0.14
USP8-219ENST00000625664 CCDC57Q2TAC2 916 aa15.91■□□□□ 0.14
USP8-219ENST00000625664 TAF7LQ5H9L4 462 aa15.91■□□□□ 0.14
USP8-219ENST00000625664 MICALL2Q8IY33 904 aa15.91■□□□□ 0.14
USP8-219ENST00000625664 KAZALD1Q96I82 304 aa15.91■□□□□ 0.14
USP8-219ENST00000625664 ZNF594Q96JF6 807 aaPredicted RBP15.91■□□□□ 0.14
USP8-219ENST00000625664 ANKRD2Q9GZV1 360 aa15.91■□□□□ 0.14
USP8-219ENST00000625664 CHRNDQ07001 517 aa15.9■□□□□ 0.14
USP8-219ENST00000625664 HELBQ8NG08 1087 aaPredicted RBP15.9■□□□□ 0.14
USP8-219ENST00000625664 TRPM4Q8TD43 1214 aa15.9■□□□□ 0.14
USP8-219ENST00000625664 KLRG1Q96E93 195 aa15.9■□□□□ 0.14
USP8-219ENST00000625664 NOB1Q9ULX3 412 aaKnown RBP15.9■□□□□ 0.14
USP8-219ENST00000625664 LEMD3Q9Y2U8 911 aa15.9■□□□□ 0.14
USP8-219ENST00000625664 GTF3C3Q9Y5Q9 886 aa15.9■□□□□ 0.14
USP8-219ENST00000625664 MED23Q9ULK4 1368 aa15.9■□□□□ 0.14
USP8-219ENST00000625664 ZNF804BA4D1E1 1349 aa15.89■□□□□ 0.13
USP8-219ENST00000625664 UTYO14607 1347 aa15.89■□□□□ 0.13
USP8-219ENST00000625664 H7C1D1 291 aa15.89■□□□□ 0.13
USP8-219ENST00000625664 RARSP54136 660 aaKnown RBP15.89■□□□□ 0.13
USP8-219ENST00000625664 TXNRD3Q86VQ6 643 aa15.89■□□□□ 0.13
USP8-219ENST00000625664 SNAP23O00161 211 aa15.88■□□□□ 0.13
USP8-219ENST00000625664 TAF5LO75529 589 aa15.88■□□□□ 0.13
USP8-219ENST00000625664 VIL1P09327 827 aaKnown RBP15.88■□□□□ 0.13
USP8-219ENST00000625664 KLRK1P26718 216 aa15.88■□□□□ 0.13
USP8-219ENST00000625664 KCNJ4P48050 445 aa15.88■□□□□ 0.13
USP8-219ENST00000625664 HIRAP54198 1017 aaPredicted RBP15.88■□□□□ 0.13
USP8-219ENST00000625664 DPF2Q92785 391 aa15.88■□□□□ 0.13
USP8-219ENST00000625664 BICC1Q9H694 974 aaKnown RBP15.88■□□□□ 0.13
USP8-219ENST00000625664 RPS12P25398 132 aaKnown RBP15.87■□□□□ 0.13
USP8-219ENST00000625664 FMR1Q06787 632 aaKnown RBP eCLIP15.87■□□□□ 0.13
USP8-219ENST00000625664 LDHAL6AQ6ZMR3 332 aa15.87■□□□□ 0.13
USP8-219ENST00000625664 SAMD7Q7Z3H4 446 aa15.87■□□□□ 0.13
USP8-219ENST00000625664 PODNQ7Z5L7 613 aa15.87■□□□□ 0.13
USP8-219ENST00000625664 USP44Q9H0E7 712 aa15.87■□□□□ 0.13
USP8-219ENST00000625664 CREBZFQ9NS37 354 aa15.87■□□□□ 0.13
USP8-219ENST00000625664 PLIN1O60240 522 aa15.87■□□□□ 0.13
USP8-219ENST00000625664 TBC1D10BQ4KMP7 808 aaPredicted RBP15.87■□□□□ 0.13
USP8-219ENST00000625664 CNNM1Q9NRU3 951 aa15.87■□□□□ 0.13
USP8-219ENST00000625664 TRAF5O00463 557 aa15.86■□□□□ 0.13
USP8-219ENST00000625664 EGFRP00533 1210 aa15.86■□□□□ 0.13
USP8-219ENST00000625664 RBM26Q5T8P6 1007 aaKnown RBP15.86■□□□□ 0.13
USP8-219ENST00000625664 RSBN1LQ6PCB5 846 aaPredicted RBP15.86■□□□□ 0.13
USP8-219ENST00000625664 ANKRD44Q8N8A2 993 aa15.86■□□□□ 0.13
USP8-219ENST00000625664 FBXW7Q969H0 707 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms