RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 IGKV5-2P06315 115 aa25.34■■□□□ 1.65
R3HCC1-210ENST00000625275 HSPA1AP0DMV8 641 aaKnown RBP25.34■■□□□ 1.65
R3HCC1-210ENST00000625275 HSPA1BP0DMV9 641 aaKnown RBP25.34■■□□□ 1.65
R3HCC1-210ENST00000625275 G2E3Q7L622 706 aa25.34■■□□□ 1.65
R3HCC1-210ENST00000625275 POLLQ9UGP5 575 aa25.34■■□□□ 1.65
R3HCC1-210ENST00000625275 SMC4Q9NTJ3 1288 aa25.33■■□□□ 1.65
R3HCC1-210ENST00000625275 EYA3Q99504 573 aa25.32■■□□□ 1.64
R3HCC1-210ENST00000625275 RIMBP2O15034 1052 aa25.31■■□□□ 1.64
R3HCC1-210ENST00000625275 MRPL50Q8N5N7 158 aaKnown RBP25.31■■□□□ 1.64
R3HCC1-210ENST00000625275 TBC1D16Q8TBP0 767 aa25.31■■□□□ 1.64
R3HCC1-210ENST00000625275 CCDC85AQ96PX6 553 aaPredicted RBP25.31■■□□□ 1.64
R3HCC1-210ENST00000625275 DBNDD1Q9H9R9 158 aa25.31■■□□□ 1.64
R3HCC1-210ENST00000625275 CTSWP56202 376 aa25.3■■□□□ 1.64
R3HCC1-210ENST00000625275 CWF19L2Q2TBE0 894 aaKnown RBP25.3■■□□□ 1.64
R3HCC1-210ENST00000625275 PODXL2Q9NZ53 605 aa25.3■■□□□ 1.64
R3HCC1-210ENST00000625275 RCAN3Q9UKA8 241 aa25.3■■□□□ 1.64
R3HCC1-210ENST00000625275 NEURL1BA8MQ27 555 aa25.29■■□□□ 1.64
R3HCC1-210ENST00000625275 FLIIQ13045 1269 aa25.29■■□□□ 1.64
R3HCC1-210ENST00000625275 ECE2O60344 883 aa25.28■■□□□ 1.64
R3HCC1-210ENST00000625275 BCAR3O75815 825 aa25.28■■□□□ 1.64
R3HCC1-210ENST00000625275 GPR101Q96P66 508 aaPredicted RBP25.28■■□□□ 1.64
R3HCC1-210ENST00000625275 ANKIB1Q9P2G1 1089 aa25.28■■□□□ 1.64
R3HCC1-210ENST00000625275 THSD7BQ9C0I4 1608 aa25.28■■□□□ 1.64
R3HCC1-210ENST00000625275 UFL1O94874 794 aa25.28■■□□□ 1.64
R3HCC1-210ENST00000625275 ANKRD18AQ8IVF6 992 aa25.28■■□□□ 1.64
R3HCC1-210ENST00000625275 RASSF10A6NK89 507 aa25.27■■□□□ 1.64
R3HCC1-210ENST00000625275 PSMD14O00487 310 aa25.27■■□□□ 1.64
R3HCC1-210ENST00000625275 VEGFBP49765 207 aa25.27■■□□□ 1.64
R3HCC1-210ENST00000625275 BRPF1P55201 1214 aaPredicted RBP25.27■■□□□ 1.64
R3HCC1-210ENST00000625275 FKBP5Q13451 457 aaPredicted RBP25.27■■□□□ 1.64
R3HCC1-210ENST00000625275 CNOT7Q9UIV1 285 aaKnown RBP25.27■■□□□ 1.64
R3HCC1-210ENST00000625275 GGA1Q9UJY5 639 aa25.27■■□□□ 1.64
R3HCC1-210ENST00000625275 RTL9Q8NET4 1388 aa25.26■■□□□ 1.63
R3HCC1-210ENST00000625275 A0A1B0GUL6 1792 aa25.26■■□□□ 1.63
R3HCC1-210ENST00000625275 FMR1Q06787 632 aaKnown RBP eCLIP25.26■■□□□ 1.63
R3HCC1-210ENST00000625275 DOK7Q18PE1 504 aa25.26■■□□□ 1.63
R3HCC1-210ENST00000625275 COL13A1Q5TAT6 717 aaPredicted RBP25.26■■□□□ 1.63
R3HCC1-210ENST00000625275 UBE3BQ7Z3V4 1068 aa25.26■■□□□ 1.63
R3HCC1-210ENST00000625275 CDC5LQ99459 802 aaKnown RBP25.26■■□□□ 1.63
R3HCC1-210ENST00000625275 ZC3H12CQ9C0D7 883 aaKnown RBP25.26■■□□□ 1.63
R3HCC1-210ENST00000625275 ABT1Q9ULW3 272 aaKnown RBP25.26■■□□□ 1.63
R3HCC1-210ENST00000625275 ZNF646O15015 1829 aaPredicted RBP25.26■■□□□ 1.63
R3HCC1-210ENST00000625275 TRAF5O00463 557 aa25.25■■□□□ 1.63
R3HCC1-210ENST00000625275 MICALL2Q8IY33 904 aa25.25■■□□□ 1.63
R3HCC1-210ENST00000625275 TTLL11Q8NHH1 800 aa25.25■■□□□ 1.63
R3HCC1-210ENST00000625275 TRPM4Q8TD43 1214 aa25.25■■□□□ 1.63
R3HCC1-210ENST00000625275 ZBTB12Q9Y330 459 aaPredicted RBP25.25■■□□□ 1.63
R3HCC1-210ENST00000625275 XDHP47989 1333 aa25.24■■□□□ 1.63
R3HCC1-210ENST00000625275 SHTN1A0MZ66 631 aa25.24■■□□□ 1.63
R3HCC1-210ENST00000625275 H7C1D1 291 aa25.24■■□□□ 1.63
R3HCC1-210ENST00000625275 DNAAF4Q8WXU2 420 aa25.24■■□□□ 1.63
R3HCC1-210ENST00000625275 DPF2Q92785 391 aa25.24■■□□□ 1.63
R3HCC1-210ENST00000625275 H7C1W4 665 aa25.23■■□□□ 1.63
R3HCC1-210ENST00000625275 DEFB115Q30KQ5 88 aa25.23■■□□□ 1.63
R3HCC1-210ENST00000625275 ZC3H15Q8WU90 426 aaKnown RBP25.23■■□□□ 1.63
R3HCC1-210ENST00000625275 GREM2Q9H772 168 aa25.23■■□□□ 1.63
R3HCC1-210ENST00000625275 PGAP2Q9UHJ9 254 aa25.23■■□□□ 1.63
R3HCC1-210ENST00000625275 RPS12P25398 132 aaKnown RBP25.22■■□□□ 1.63
R3HCC1-210ENST00000625275 HIRAP54198 1017 aaPredicted RBP25.22■■□□□ 1.63
R3HCC1-210ENST00000625275 GCKRQ14397 625 aa25.22■■□□□ 1.63
R3HCC1-210ENST00000625275 KIF16BQ96L93 1317 aa25.22■■□□□ 1.63
R3HCC1-210ENST00000625275 LINS1Q8NG48 757 aa25.21■■□□□ 1.63
R3HCC1-210ENST00000625275 KCNQ5Q9NR82 932 aa25.21■■□□□ 1.63
R3HCC1-210ENST00000625275 NOB1Q9ULX3 412 aaKnown RBP25.21■■□□□ 1.63
R3HCC1-210ENST00000625275 G3V3G9 751 aa25.21■■□□□ 1.63
R3HCC1-210ENST00000625275 DCAF8Q5TAQ9 597 aa25.21■■□□□ 1.63
R3HCC1-210ENST00000625275 GLIS2Q9BZE0 524 aaPredicted RBP25.21■■□□□ 1.63
R3HCC1-210ENST00000625275 PTPRCP08575 1304 aa25.2■■□□□ 1.63
R3HCC1-210ENST00000625275 ZNF609O15014 1411 aa25.2■■□□□ 1.62
R3HCC1-210ENST00000625275 CST9Q5W186 159 aa25.2■■□□□ 1.62
R3HCC1-210ENST00000625275 PLA2G12BQ9BX93 195 aa25.2■■□□□ 1.62
R3HCC1-210ENST00000625275 BSDC1Q9NW68 430 aaPredicted RBP25.2■■□□□ 1.62
R3HCC1-210ENST00000625275 ATP2B4P23634 1241 aa25.19■■□□□ 1.62
R3HCC1-210ENST00000625275 CASP7P55210 303 aa25.18■■□□□ 1.62
R3HCC1-210ENST00000625275 SAMD7Q7Z3H4 446 aa25.18■■□□□ 1.62
R3HCC1-210ENST00000625275 FRAT1Q92837 279 aaPredicted RBP25.18■■□□□ 1.62
R3HCC1-210ENST00000625275 WDR33Q9C0J8 1336 aaKnown RBP25.18■■□□□ 1.62
R3HCC1-210ENST00000625275 VIL1P09327 827 aaKnown RBP25.17■■□□□ 1.62
R3HCC1-210ENST00000625275 MINPP1Q9UNW1 487 aa25.17■■□□□ 1.62
R3HCC1-210ENST00000625275 MED23Q9ULK4 1368 aa25.17■■□□□ 1.62
R3HCC1-210ENST00000625275 TBC1D10BQ4KMP7 808 aaPredicted RBP25.16■■□□□ 1.62
R3HCC1-210ENST00000625275 CDC37L1Q7L3B6 337 aa25.16■■□□□ 1.62
R3HCC1-210ENST00000625275 TLL2Q9Y6L7 1015 aa25.16■■□□□ 1.62
R3HCC1-210ENST00000625275 F6X3S4 739 aa25.15■■□□□ 1.62
R3HCC1-210ENST00000625275 FOXN1O15353 648 aa25.15■■□□□ 1.62
R3HCC1-210ENST00000625275 CELF2O95319 508 aaKnown RBP25.15■■□□□ 1.62
R3HCC1-210ENST00000625275 FAM161AQ3B820 660 aa25.15■■□□□ 1.62
R3HCC1-210ENST00000625275 ARHGAP45Q92619 1136 aa25.15■■□□□ 1.62
R3HCC1-210ENST00000625275 AIDAQ96BJ3 306 aa25.15■■□□□ 1.62
R3HCC1-210ENST00000625275 EGFRP00533 1210 aa25.15■■□□□ 1.62
R3HCC1-210ENST00000625275 ITGA6P23229 1130 aa25.15■■□□□ 1.62
R3HCC1-210ENST00000625275 IGHMBP2P38935 993 aaKnown RBP25.15■■□□□ 1.62
R3HCC1-210ENST00000625275 PAXIP1Q6ZW49 1069 aaPredicted RBP25.15■■□□□ 1.62
R3HCC1-210ENST00000625275 TNS4Q8IZW8 715 aa25.15■■□□□ 1.62
R3HCC1-210ENST00000625275 CAPNS2Q96L46 248 aa25.15■■□□□ 1.62
R3HCC1-210ENST00000625275 IPO8O15397 1037 aaKnown RBP25.14■■□□□ 1.61
R3HCC1-210ENST00000625275 ECE1P42892 770 aa25.14■■□□□ 1.61
R3HCC1-210ENST00000625275 WBP1LQ9NX94 342 aa25.14■■□□□ 1.61
R3HCC1-210ENST00000625275 CSF1RP07333 972 aa25.13■■□□□ 1.61
R3HCC1-210ENST00000625275 TRIM27P14373 513 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms