RNA–Protein interactions for RNA: ENST00000624193.1

ATRX-215, Transcript of ATRX, chromatin remodeler, human

TSL 4

Gene ATRX, Length 463 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-215	ENST00000624193	IRS4	O14654	1257 aa	Predicted RBP	19.93	■□□□□ 0.78
ATRX-215	ENST00000624193	DGKZ	Q13574	1117 aa		19.93	■□□□□ 0.78
ATRX-215	ENST00000624193	RGMB	Q6NW40	437 aa		19.93	■□□□□ 0.78
ATRX-215	ENST00000624193	TBC1D16	Q8TBP0	767 aa		19.93	■□□□□ 0.78
ATRX-215	ENST00000624193	DCPS	Q96C86	337 aa	Known RBP	19.93	■□□□□ 0.78
ATRX-215	ENST00000624193	GBA2	Q9HCG7	927 aa	Predicted RBP	19.93	■□□□□ 0.78
ATRX-215	ENST00000624193	HYPK	Q9NX55	129 aa		19.93	■□□□□ 0.78
ATRX-215	ENST00000624193	MYBBP1A	Q9BQG0	1328 aa	Known RBP	19.93	■□□□□ 0.78
ATRX-215	ENST00000624193	ZNF316	A6NFI3	1004 aa	Predicted RBP	19.92	■□□□□ 0.78
ATRX-215	ENST00000624193	RPS8	P62241	208 aa	Known RBP	19.92	■□□□□ 0.78
ATRX-215	ENST00000624193	FAM155A	B1AL88	458 aa	Predicted RBP	19.91	■□□□□ 0.78
ATRX-215	ENST00000624193	SLC34A2	O95436	690 aa		19.91	■□□□□ 0.78
ATRX-215	ENST00000624193	WDR43	Q15061	677 aa	Known RBP eCLIP	19.91	■□□□□ 0.78
ATRX-215	ENST00000624193	KIF4B	Q2VIQ3	1234 aa		19.91	■□□□□ 0.78
ATRX-215	ENST00000624193	DUSP27	Q5VZP5	1158 aa		19.91	■□□□□ 0.78
ATRX-215	ENST00000624193	C2orf69	Q8N8R5	385 aa		19.91	■□□□□ 0.78
ATRX-215	ENST00000624193	TRIM28	Q13263	835 aa	Known RBP	19.9	■□□□□ 0.78
ATRX-215	ENST00000624193	RIC3	Q7Z5B4	369 aa		19.89	■□□□□ 0.77
ATRX-215	ENST00000624193	CCDC102A	Q96A19	550 aa		19.89	■□□□□ 0.77
ATRX-215	ENST00000624193	ZC3H12C	Q9C0D7	883 aa	Known RBP	19.89	■□□□□ 0.77
ATRX-215	ENST00000624193	SEC31B	Q9NQW1	1179 aa		19.89	■□□□□ 0.77
ATRX-215	ENST00000624193	MBIP	Q9NS73	344 aa		19.89	■□□□□ 0.77
ATRX-215	ENST00000624193	GGA3	Q9NZ52	723 aa		19.89	■□□□□ 0.77
ATRX-215	ENST00000624193	ASTN2	O75129	1339 aa	Predicted RBP	19.88	■□□□□ 0.77
ATRX-215	ENST00000624193		G3V3G9	751 aa		19.88	■□□□□ 0.77
ATRX-215	ENST00000624193	UFL1	O94874	794 aa		19.88	■□□□□ 0.77
ATRX-215	ENST00000624193	VIL1	P09327	827 aa	Known RBP	19.88	■□□□□ 0.77
ATRX-215	ENST00000624193	ZNF157	P51786	506 aa	Predicted RBP	19.88	■□□□□ 0.77
ATRX-215	ENST00000624193	KIF23	Q02241	960 aa	Predicted RBP	19.88	■□□□□ 0.77
ATRX-215	ENST00000624193	GOLGA2	Q08379	1002 aa		19.88	■□□□□ 0.77
ATRX-215	ENST00000624193	DCAF8	Q5TAQ9	597 aa		19.88	■□□□□ 0.77
ATRX-215	ENST00000624193	SULF1	Q8IWU6	871 aa		19.88	■□□□□ 0.77
ATRX-215	ENST00000624193	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	19.88	■□□□□ 0.77
ATRX-215	ENST00000624193	PODXL2	Q9NZ53	605 aa		19.88	■□□□□ 0.77
ATRX-215	ENST00000624193	ANKIB1	Q9P2G1	1089 aa		19.88	■□□□□ 0.77
ATRX-215	ENST00000624193	AKAP11	Q9UKA4	1901 aa		19.88	■□□□□ 0.77
ATRX-215	ENST00000624193	PSME4	Q14997	1843 aa		19.88	■□□□□ 0.77
ATRX-215	ENST00000624193	SAGE1	Q9NXZ1	904 aa		19.87	■□□□□ 0.77
ATRX-215	ENST00000624193	ADAMTS8	Q9UP79	889 aa		19.87	■□□□□ 0.77
ATRX-215	ENST00000624193	MYD88	Q99836	296 aa		19.86	■□□□□ 0.77
ATRX-215	ENST00000624193	PHAX	Q9H814	394 aa	Known RBP	19.86	■□□□□ 0.77
ATRX-215	ENST00000624193	GGA1	Q9UJY5	639 aa		19.86	■□□□□ 0.77
ATRX-215	ENST00000624193	SLC10A3	P09131	477 aa		19.85	■□□□□ 0.77
ATRX-215	ENST00000624193	HSP90B1	P14625	803 aa	Known RBP	19.85	■□□□□ 0.77
ATRX-215	ENST00000624193	CDCA5	Q96FF9	252 aa		19.85	■□□□□ 0.77
ATRX-215	ENST00000624193	ZNF609	O15014	1411 aa		19.85	■□□□□ 0.77
ATRX-215	ENST00000624193	TRPA1	O75762	1119 aa		19.84	■□□□□ 0.77
ATRX-215	ENST00000624193	CCDC152	Q4G0S7	254 aa		19.84	■□□□□ 0.77
ATRX-215	ENST00000624193	ANGEL2	Q5VTE6	544 aa	Known RBP	19.84	■□□□□ 0.77
ATRX-215	ENST00000624193	CCDC85A	Q96PX6	553 aa	Predicted RBP	19.84	■□□□□ 0.77
ATRX-215	ENST00000624193	RNF186	Q9NXI6	227 aa		19.84	■□□□□ 0.77
ATRX-215	ENST00000624193	PCCA	P05165	728 aa	Predicted RBP	19.83	■□□□□ 0.77
ATRX-215	ENST00000624193	ZNF853	P0CG23	659 aa		19.83	■□□□□ 0.77
ATRX-215	ENST00000624193	ZNF280A	P59817	542 aa	Predicted RBP	19.83	■□□□□ 0.77
ATRX-215	ENST00000624193	RSBN1L	Q6PCB5	846 aa	Predicted RBP	19.83	■□□□□ 0.77
ATRX-215	ENST00000624193	JARID2	Q92833	1246 aa	Predicted RBP	19.83	■□□□□ 0.77
ATRX-215	ENST00000624193	ELL2	O00472	640 aa	Predicted RBP	19.82	■□□□□ 0.76
ATRX-215	ENST00000624193	PDE8A	O60658	829 aa		19.82	■□□□□ 0.76
ATRX-215	ENST00000624193	SCARF1	Q14162	830 aa		19.82	■□□□□ 0.76
ATRX-215	ENST00000624193	CCDC191	Q8NCU4	936 aa		19.82	■□□□□ 0.76
ATRX-215	ENST00000624193	AGBL3	Q8NEM8	1001 aa		19.82	■□□□□ 0.76
ATRX-215	ENST00000624193	CWC25	Q9NXE8	425 aa	Predicted RBP	19.82	■□□□□ 0.76
ATRX-215	ENST00000624193	PAPPA2	Q9BXP8	1791 aa		19.82	■□□□□ 0.76
ATRX-215	ENST00000624193	SPEF2	Q9C093	1822 aa		19.81	■□□□□ 0.76
ATRX-215	ENST00000624193	XDH	P47989	1333 aa		19.81	■□□□□ 0.76
ATRX-215	ENST00000624193	CSRNP1	Q96S65	589 aa		19.81	■□□□□ 0.76
ATRX-215	ENST00000624193	IFT57	Q9NWB7	429 aa		19.81	■□□□□ 0.76
ATRX-215	ENST00000624193	USP17L8	P0C7I0	530 aa		19.8	■□□□□ 0.76
ATRX-215	ENST00000624193	RASAL3	Q86YV0	1011 aa		19.8	■□□□□ 0.76
ATRX-215	ENST00000624193	ANKRD18A	Q8IVF6	992 aa		19.8	■□□□□ 0.76
ATRX-215	ENST00000624193	GNAI1	P63096	354 aa		19.79	■□□□□ 0.76
ATRX-215	ENST00000624193	GML	Q99445	158 aa		19.79	■□□□□ 0.76
ATRX-215	ENST00000624193	METTL22	Q9BUU2	404 aa	Predicted RBP	19.79	■□□□□ 0.76
ATRX-215	ENST00000624193	MYOZ2	Q9NPC6	264 aa		19.79	■□□□□ 0.76
ATRX-215	ENST00000624193	MYH3	P11055	1940 aa		19.78	■□□□□ 0.76
ATRX-215	ENST00000624193	ATP2B4	P23634	1241 aa		19.78	■□□□□ 0.76
ATRX-215	ENST00000624193	SOX10	P56693	466 aa		19.78	■□□□□ 0.76
ATRX-215	ENST00000624193	PRKRIP1	Q9H875	184 aa	Predicted RBP	19.78	■□□□□ 0.76
ATRX-215	ENST00000624193	SCAF8	Q9UPN6	1271 aa	Known RBP	19.78	■□□□□ 0.76
ATRX-215	ENST00000624193	PITPNM2	Q9BZ72	1349 aa		19.77	■□□□□ 0.76
ATRX-215	ENST00000624193	ZNF646	O15015	1829 aa	Predicted RBP	19.77	■□□□□ 0.76
ATRX-215	ENST00000624193	USP17L3	A6NCW0	530 aa		19.77	■□□□□ 0.76
ATRX-215	ENST00000624193	USP17L4	A6NCW7	530 aa		19.77	■□□□□ 0.76
ATRX-215	ENST00000624193	APAF1	O14727	1248 aa		19.77	■□□□□ 0.76
ATRX-215	ENST00000624193	DDX58	O95786	925 aa	Known RBP	19.77	■□□□□ 0.76
ATRX-215	ENST00000624193	FKBP1B	P68106	108 aa		19.77	■□□□□ 0.76
ATRX-215	ENST00000624193	CALD1	Q05682	793 aa	Known RBP	19.77	■□□□□ 0.76
ATRX-215	ENST00000624193	USP17L1	Q7RTZ2	530 aa		19.77	■□□□□ 0.76
ATRX-215	ENST00000624193	C8orf58	Q8NAV2	365 aa		19.77	■□□□□ 0.76
ATRX-215	ENST00000624193	WTIP	A6NIX2	430 aa	Predicted RBP	19.76	■□□□□ 0.75
ATRX-215	ENST00000624193	CTSW	P56202	376 aa		19.76	■□□□□ 0.75
ATRX-215	ENST00000624193	MOB2	Q70IA6	237 aa		19.76	■□□□□ 0.75
ATRX-215	ENST00000624193	PODN	Q7Z5L7	613 aa		19.76	■□□□□ 0.75
ATRX-215	ENST00000624193	REM2	Q8IYK8	340 aa	Predicted RBP	19.76	■□□□□ 0.75
ATRX-215	ENST00000624193	CDC5L	Q99459	802 aa	Known RBP	19.76	■□□□□ 0.75
ATRX-215	ENST00000624193	MAP3K2	Q9Y2U5	619 aa		19.76	■□□□□ 0.75
ATRX-215	ENST00000624193	MED23	Q9ULK4	1368 aa		19.75	■□□□□ 0.75
ATRX-215	ENST00000624193	CTU1	Q7Z7A3	348 aa	Known RBP	19.75	■□□□□ 0.75
ATRX-215	ENST00000624193	CCDC30	Q5VVM6	783 aa		19.74	■□□□□ 0.75
ATRX-215	ENST00000624193	NBPF9	Q3BBW0	867 aa		19.73	■□□□□ 0.75

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms