RNA–Protein interactions for RNA: ENST00000623706.3

ATRX-212, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 2

Gene ATRX, Length 7,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-212ENST00000623706 DNAJC8O75937 253 aaPredicted RBP3.95□□□□□ -1.78
ATRX-212ENST00000623706 ZC3H6P61129 1189 aaKnown RBP3.95□□□□□ -1.78
ATRX-212ENST00000623706 ATP11AP98196 1134 aa3.95□□□□□ -1.78
ATRX-212ENST00000623706 ZBTB16Q05516 673 aa3.95□□□□□ -1.78
ATRX-212ENST00000623706 PSME1Q06323 249 aa3.95□□□□□ -1.78
ATRX-212ENST00000623706 CLUL1Q15846 466 aa3.95□□□□□ -1.78
ATRX-212ENST00000623706 INTS8Q75QN2 995 aaKnown RBP3.95□□□□□ -1.78
ATRX-212ENST00000623706 CACNA2D4Q7Z3S7 1137 aa3.95□□□□□ -1.78
ATRX-212ENST00000623706 JMYQ8N9B5 988 aa3.95□□□□□ -1.78
ATRX-212ENST00000623706 GOLGA1Q92805 767 aa3.95□□□□□ -1.78
ATRX-212ENST00000623706 IFT74Q96LB3 600 aa3.95□□□□□ -1.78
ATRX-212ENST00000623706 GBP5Q96PP8 586 aa3.95□□□□□ -1.78
ATRX-212ENST00000623706 ARFGAP3Q9NP61 516 aa3.95□□□□□ -1.78
ATRX-212ENST00000623706 UTP6Q9NYH9 597 aaKnown RBP3.95□□□□□ -1.78
ATRX-212ENST00000623706 SERPINC1P01008 464 aa3.95□□□□□ -1.78
ATRX-212ENST00000623706 GBP1P32455 592 aa3.95□□□□□ -1.78
ATRX-212ENST00000623706 PIP4K2BP78356 416 aa3.95□□□□□ -1.78
ATRX-212ENST00000623706 VEPH1Q14D04 833 aa3.95□□□□□ -1.78
ATRX-212ENST00000623706 RILPL1Q5EBL4 403 aa3.95□□□□□ -1.78
ATRX-212ENST00000623706 ZBTB9Q96C00 473 aa3.95□□□□□ -1.78
ATRX-212ENST00000623706 CFAP36Q96G28 342 aa3.95□□□□□ -1.78
ATRX-212ENST00000623706 EIF2AQ9BY44 585 aaKnown RBP3.95□□□□□ -1.78
ATRX-212ENST00000623706 NBPF7P0C2Y1 421 aaPredicted RBP3.94□□□□□ -1.78
ATRX-212ENST00000623706 EVCP57679 992 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 TAF7Q15545 349 aaPredicted RBP3.94□□□□□ -1.78
ATRX-212ENST00000623706 HS1BP3Q53T59 392 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 UBE2Q1Q7Z7E8 422 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 CPLX4Q7Z7G2 160 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 RASEFQ8IZ41 740 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 SIX5Q8N196 739 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 DENND6BQ8NEG7 585 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 RILPL2Q969X0 211 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 RIOK1Q9BRS2 568 aaKnown RBP3.94□□□□□ -1.78
ATRX-212ENST00000623706 MMRN2Q9H8L6 949 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 TSKSQ9UJT2 592 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 STOML2Q9UJZ1 356 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 PPP1R9AQ9ULJ8 1098 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 DHX16O60231 1041 aaKnown RBP3.94□□□□□ -1.78
ATRX-212ENST00000623706 KRT4P19013 534 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 PHEXP78562 749 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 ATF7IPQ6VMQ6 1270 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 B4GALNT4Q76KP1 1039 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 KRT26Q7Z3Y9 468 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 CNTROBQ8N137 903 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 CFDP1Q9UEE9 299 aaPredicted RBP3.94□□□□□ -1.78
ATRX-212ENST00000623706 TMEM191CA6NGB0 347 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 A8MXQ7 604 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 STXBP3O00186 592 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 EIF2S3P41091 472 aaKnown RBP3.94□□□□□ -1.78
ATRX-212ENST00000623706 ECE1P42892 770 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 NME9Q86XW9 330 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 GDAP1L1Q96MZ0 367 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 SMARCAD1Q9H4L7 1026 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 SYNDIG1Q9H7V2 258 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 COG4Q9H9E3 785 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 LZTFL1Q9NQ48 299 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 RNF216Q9NWF9 866 aaPredicted RBP3.94□□□□□ -1.78
ATRX-212ENST00000623706 CETN3O15182 167 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 URI1O94763 535 aaPredicted RBP3.94□□□□□ -1.78
ATRX-212ENST00000623706 CCDC102BQ68D86 513 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 ZNF354CQ86Y25 554 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 CEP19Q96LK0 163 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 CAAP1Q9H8G2 361 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 CACYBPQ9HB71 228 aaKnown RBP3.94□□□□□ -1.78
ATRX-212ENST00000623706 SYCE3A1L190 88 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 AXIN1O15169 862 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 MAP4K4O95819 1239 aaPredicted RBP3.94□□□□□ -1.78
ATRX-212ENST00000623706 APOEP02649 317 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 ATP2A2P16615 1042 aaKnown RBP3.94□□□□□ -1.78
ATRX-212ENST00000623706 POLGP54098 1239 aaPredicted RBP3.94□□□□□ -1.78
ATRX-212ENST00000623706 CCDC15Q0P6D6 951 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 ASIC2Q16515 512 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 SPECC1Q5M775 1068 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 FAM47EQ6ZV65 393 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 NEK11Q8NG66 645 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 HVCN1Q96D96 273 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 TIMMDC1Q9NPL8 285 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 STAG3Q9UJ98 1225 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 SMCO3A2RU48 225 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 DEAF1O75398 565 aaPredicted RBP3.94□□□□□ -1.78
ATRX-212ENST00000623706 GIGYF1O75420 1035 aaPredicted RBP3.94□□□□□ -1.78
ATRX-212ENST00000623706 TSPAN9O75954 239 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 CTAGE8P0CG41 777 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 ARHGAP44Q17R89 818 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 TBRG1Q3YBR2 411 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 RBM20Q5T481 1227 aaKnown RBP3.94□□□□□ -1.78
ATRX-212ENST00000623706 CCDC30Q5VVM6 783 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 CTAGE4Q8IX94 777 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 EXOC8Q8IYI6 725 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 FNBP4Q8N3X1 1017 aaPredicted RBP3.94□□□□□ -1.78
ATRX-212ENST00000623706 CHMP6Q96FZ7 201 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 TSNARE1Q96NA8 513 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 FRMD6Q96NE9 622 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 SH3GL1Q99961 368 aa3.94□□□□□ -1.78
ATRX-212ENST00000623706 NAT10Q9H0A0 1025 aaKnown RBP3.94□□□□□ -1.78
ATRX-212ENST00000623706 GEMIN8Q9NWZ8 242 aaKnown RBP3.94□□□□□ -1.78
ATRX-212ENST00000623706 GOLGA8MH3BSY2 632 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 DKC1O60832 514 aaKnown RBP eCLIP3.93□□□□□ -1.78
ATRX-212ENST00000623706 HAUS5O94927 633 aa3.93□□□□□ -1.78
ATRX-212ENST00000623706 LCA5LO95447 670 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms