RNA–Protein interactions for RNA: ENST00000623478.1

PCDHB4-202, Transcript of protocadherin beta 4, humanhuman

TSL 1 (best)

Gene PCDHB4, Length 1,206 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-202ENST00000623478 DOK7Q18PE1 504 aa26.6■■□□□ 1.85
PCDHB4-202ENST00000623478 SLC4A10Q6U841 1118 aa26.6■■□□□ 1.85
PCDHB4-202ENST00000623478 MRPL50Q8N5N7 158 aaKnown RBP26.6■■□□□ 1.85
PCDHB4-202ENST00000623478 EYA3Q99504 573 aa26.6■■□□□ 1.85
PCDHB4-202ENST00000623478 GPRC5DQ9NZD1 345 aa26.6■■□□□ 1.85
PCDHB4-202ENST00000623478 GGA1Q9UJY5 639 aa26.6■■□□□ 1.85
PCDHB4-202ENST00000623478 PCNTO95613 3336 aa26.59■■□□□ 1.85
PCDHB4-202ENST00000623478 TNIP1Q15025 636 aa26.58■■□□□ 1.85
PCDHB4-202ENST00000623478 MAP1SQ66K74 1059 aaPredicted RBP26.58■■□□□ 1.85
PCDHB4-202ENST00000623478 XDHP47989 1333 aa26.58■■□□□ 1.85
PCDHB4-202ENST00000623478 ECE2O60344 883 aa26.57■■□□□ 1.84
PCDHB4-202ENST00000623478 CSF1RP07333 972 aa26.57■■□□□ 1.84
PCDHB4-202ENST00000623478 ITGA6P23229 1130 aa26.57■■□□□ 1.84
PCDHB4-202ENST00000623478 MIER1Q8N108 512 aa26.57■■□□□ 1.84
PCDHB4-202ENST00000623478 SSH1Q8WYL5 1049 aa26.57■■□□□ 1.84
PCDHB4-202ENST00000623478 BCL2L13Q9BXK5 485 aa26.57■■□□□ 1.84
PCDHB4-202ENST00000623478 KCNQ5Q9NR82 932 aa26.57■■□□□ 1.84
PCDHB4-202ENST00000623478 BSDC1Q9NW68 430 aaPredicted RBP26.57■■□□□ 1.84
PCDHB4-202ENST00000623478 PASKQ96RG2 1323 aa26.57■■□□□ 1.84
PCDHB4-202ENST00000623478 WTIPA6NIX2 430 aaPredicted RBP26.56■■□□□ 1.84
PCDHB4-202ENST00000623478 ITGBL1O95965 494 aaPredicted RBP26.56■■□□□ 1.84
PCDHB4-202ENST00000623478 DIEXFQ68CQ4 756 aaKnown RBP26.56■■□□□ 1.84
PCDHB4-202ENST00000623478 TRMT2AQ8IZ69 625 aaKnown RBP26.56■■□□□ 1.84
PCDHB4-202ENST00000623478 KLRG1Q96E93 195 aa26.56■■□□□ 1.84
PCDHB4-202ENST00000623478 ZC3H12CQ9C0D7 883 aaKnown RBP26.56■■□□□ 1.84
PCDHB4-202ENST00000623478 MINPP1Q9UNW1 487 aa26.56■■□□□ 1.84
PCDHB4-202ENST00000623478 GRM8O00222 908 aa26.55■■□□□ 1.84
PCDHB4-202ENST00000623478 PSMD14O00487 310 aa26.55■■□□□ 1.84
PCDHB4-202ENST00000623478 FOXO4P98177 505 aa26.55■■□□□ 1.84
PCDHB4-202ENST00000623478 SHTN1A0MZ66 631 aa26.54■■□□□ 1.84
PCDHB4-202ENST00000623478 IGHMBP2P38935 993 aaKnown RBP26.54■■□□□ 1.84
PCDHB4-202ENST00000623478 USP50Q70EL3 339 aaPredicted RBP26.54■■□□□ 1.84
PCDHB4-202ENST00000623478 CNTROBQ8N137 903 aa26.54■■□□□ 1.84
PCDHB4-202ENST00000623478 SRCIN1Q9C0H9 1055 aa26.54■■□□□ 1.84
PCDHB4-202ENST00000623478 ADARB2Q9NS39 739 aaKnown RBP26.54■■□□□ 1.84
PCDHB4-202ENST00000623478 ZBTB12Q9Y330 459 aaPredicted RBP26.54■■□□□ 1.84
PCDHB4-202ENST00000623478 SCN9AQ15858 1988 aa26.53■■□□□ 1.84
PCDHB4-202ENST00000623478 ALDH1L1O75891 902 aa26.53■■□□□ 1.84
PCDHB4-202ENST00000623478 EPHA10Q5JZY3 1008 aa26.53■■□□□ 1.84
PCDHB4-202ENST00000623478 ATP2B4P23634 1241 aa26.52■■□□□ 1.84
PCDHB4-202ENST00000623478 C9orf78Q9NZ63 289 aaPredicted RBP26.52■■□□□ 1.84
PCDHB4-202ENST00000623478 PTPRCP08575 1304 aa26.51■■□□□ 1.83
PCDHB4-202ENST00000623478 CREBZFQ9NS37 354 aa26.51■■□□□ 1.83
PCDHB4-202ENST00000623478 CHMP3Q9Y3E7 222 aa26.51■■□□□ 1.83
PCDHB4-202ENST00000623478 ANKRD18BA2A2Z9 1011 aa26.5■■□□□ 1.83
PCDHB4-202ENST00000623478 G3V3G9 751 aa26.5■■□□□ 1.83
PCDHB4-202ENST00000623478 DCAF8Q5TAQ9 597 aa26.5■■□□□ 1.83
PCDHB4-202ENST00000623478 MPHOSPH8Q99549 860 aa26.5■■□□□ 1.83
PCDHB4-202ENST00000623478 CNOT7Q9UIV1 285 aaKnown RBP26.5■■□□□ 1.83
PCDHB4-202ENST00000623478 CCT4P50991 539 aaKnown RBP26.49■■□□□ 1.83
PCDHB4-202ENST00000623478 ALDH1L2Q3SY69 923 aa26.49■■□□□ 1.83
PCDHB4-202ENST00000623478 LMBR1LQ6UX01 489 aa26.49■■□□□ 1.83
PCDHB4-202ENST00000623478 MICALL2Q8IY33 904 aa26.49■■□□□ 1.83
PCDHB4-202ENST00000623478 TRPM4Q8TD43 1214 aa26.49■■□□□ 1.83
PCDHB4-202ENST00000623478 SMC4Q9NTJ3 1288 aa26.49■■□□□ 1.83
PCDHB4-202ENST00000623478 MED23Q9ULK4 1368 aa26.48■■□□□ 1.83
PCDHB4-202ENST00000623478 IFIT5Q13325 482 aaKnown RBP26.48■■□□□ 1.83
PCDHB4-202ENST00000623478 NBPF7P0C2Y1 421 aaPredicted RBP26.47■■□□□ 1.83
PCDHB4-202ENST00000623478 HIRAP54198 1017 aaPredicted RBP26.47■■□□□ 1.83
PCDHB4-202ENST00000623478 FMR1Q06787 632 aaKnown RBP eCLIP26.46■■□□□ 1.83
PCDHB4-202ENST00000623478 DPF2Q92785 391 aa26.46■■□□□ 1.83
PCDHB4-202ENST00000623478 KAZALD1Q96I82 304 aa26.46■■□□□ 1.83
PCDHB4-202ENST00000623478 SUCLG2Q96I99 432 aa26.46■■□□□ 1.83
PCDHB4-202ENST00000623478 TMEM88BA6NKF7 163 aa26.45■■□□□ 1.82
PCDHB4-202ENST00000623478 H7C1D1 291 aa26.45■■□□□ 1.82
PCDHB4-202ENST00000623478 KLRK1P26718 216 aa26.45■■□□□ 1.82
PCDHB4-202ENST00000623478 JMYQ8N9B5 988 aa26.45■■□□□ 1.82
PCDHB4-202ENST00000623478 ANKRD2Q9GZV1 360 aa26.45■■□□□ 1.82
PCDHB4-202ENST00000623478 MKRN1Q9UHC7 482 aaKnown RBP26.45■■□□□ 1.82
PCDHB4-202ENST00000623478 UTYO14607 1347 aa26.44■■□□□ 1.82
PCDHB4-202ENST00000623478 TRAF5O00463 557 aa26.44■■□□□ 1.82
PCDHB4-202ENST00000623478 EGFRP00533 1210 aa26.44■■□□□ 1.82
PCDHB4-202ENST00000623478 VIL1P09327 827 aaKnown RBP26.44■■□□□ 1.82
PCDHB4-202ENST00000623478 RPS12P25398 132 aaKnown RBP26.44■■□□□ 1.82
PCDHB4-202ENST00000623478 CHRNDQ07001 517 aa26.44■■□□□ 1.82
PCDHB4-202ENST00000623478 SAMD7Q7Z3H4 446 aa26.44■■□□□ 1.82
PCDHB4-202ENST00000623478 TXNRD3Q86VQ6 643 aa26.44■■□□□ 1.82
PCDHB4-202ENST00000623478 ZNF594Q96JF6 807 aaPredicted RBP26.44■■□□□ 1.82
PCDHB4-202ENST00000623478 LEMD3Q9Y2U8 911 aa26.44■■□□□ 1.82
PCDHB4-202ENST00000623478 PSME4Q14997 1843 aa26.44■■□□□ 1.82
PCDHB4-202ENST00000623478 A0A1B0GUL6 1792 aa26.43■■□□□ 1.82
PCDHB4-202ENST00000623478 ZNF804BA4D1E1 1349 aa26.43■■□□□ 1.82
PCDHB4-202ENST00000623478 CT47B1P0C2W7 299 aaPredicted RBP26.43■■□□□ 1.82
PCDHB4-202ENST00000623478 CCDC57Q2TAC2 916 aa26.43■■□□□ 1.82
PCDHB4-202ENST00000623478 TBC1D10BQ4KMP7 808 aaPredicted RBP26.42■■□□□ 1.82
PCDHB4-202ENST00000623478 SNAP23O00161 211 aa26.41■■□□□ 1.82
PCDHB4-202ENST00000623478 TAF5LO75529 589 aa26.41■■□□□ 1.82
PCDHB4-202ENST00000623478 PODNQ7Z5L7 613 aa26.41■■□□□ 1.82
PCDHB4-202ENST00000623478 HELBQ8NG08 1087 aaPredicted RBP26.41■■□□□ 1.82
PCDHB4-202ENST00000623478 PGAP2Q9UHJ9 254 aa26.41■■□□□ 1.82
PCDHB4-202ENST00000623478 KCNJ4P48050 445 aa26.4■■□□□ 1.82
PCDHB4-202ENST00000623478 TAF7LQ5H9L4 462 aa26.4■■□□□ 1.82
PCDHB4-202ENST00000623478 RSBN1LQ6PCB5 846 aaPredicted RBP26.4■■□□□ 1.82
PCDHB4-202ENST00000623478 GLIS2Q9BZE0 524 aaPredicted RBP26.4■■□□□ 1.82
PCDHB4-202ENST00000623478 BICC1Q9H694 974 aaKnown RBP26.4■■□□□ 1.82
PCDHB4-202ENST00000623478 CNTNAP1P78357 1384 aa26.4■■□□□ 1.82
PCDHB4-202ENST00000623478 ZNF609O15014 1411 aa26.39■■□□□ 1.82
PCDHB4-202ENST00000623478 USP17L3A6NCW0 530 aa26.39■■□□□ 1.82
PCDHB4-202ENST00000623478 USP17L4A6NCW7 530 aa26.39■■□□□ 1.82
PCDHB4-202ENST00000623478 USP17L1Q7RTZ2 530 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms