RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 ECE2O60344 883 aa11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 CELF2O95319 508 aaKnown RBP11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 VIL1P09327 827 aaKnown RBP11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 MAP2K1Q02750 393 aaPredicted RBP11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 CALD1Q05682 793 aaKnown RBP11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 GOLGA2Q08379 1002 aa11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 CCDC30Q5VVM6 783 aa11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 KSR2Q6VAB6 950 aa11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 CDC37L1Q7L3B6 337 aa11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 WWC1Q8IX03 1113 aa11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 MICALL2Q8IY33 904 aa11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 PI4KAP1Q8N8J0 262 aa11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 TSR2Q969E8 191 aaKnown RBP11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 CCDC85AQ96PX6 553 aaPredicted RBP11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 ZC3H12CQ9C0D7 883 aaKnown RBP11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 MAP3K2Q9Y2U5 619 aa11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 CDHR2Q9BYE9 1310 aa11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 CCDC27Q2M243 656 aa11.78□□□□□ -0.52
PCDHB9-202ENST00000623266 TBC1D10BQ4KMP7 808 aaPredicted RBP11.78□□□□□ -0.52
PCDHB9-202ENST00000623266 TTLL11Q8NHH1 800 aa11.78□□□□□ -0.52
PCDHB9-202ENST00000623266 ZIC5Q96T25 663 aa11.78□□□□□ -0.52
PCDHB9-202ENST00000623266 CWC25Q9NXE8 425 aaPredicted RBP11.78□□□□□ -0.52
PCDHB9-202ENST00000623266 H7C1W4 665 aa11.77□□□□□ -0.53
PCDHB9-202ENST00000623266 MAP2K2P36507 400 aa11.77□□□□□ -0.53
PCDHB9-202ENST00000623266 ECE1P42892 770 aa11.77□□□□□ -0.53
PCDHB9-202ENST00000623266 GRM1Q13255 1194 aa11.77□□□□□ -0.53
PCDHB9-202ENST00000623266 RBM26Q5T8P6 1007 aaKnown RBP11.77□□□□□ -0.53
PCDHB9-202ENST00000623266 AIDAQ96BJ3 306 aa11.77□□□□□ -0.53
PCDHB9-202ENST00000623266 EYA3Q99504 573 aa11.77□□□□□ -0.53
PCDHB9-202ENST00000623266 SLC4A2P04920 1241 aa11.76□□□□□ -0.53
PCDHB9-202ENST00000623266 CWF19L2Q2TBE0 894 aaKnown RBP11.76□□□□□ -0.53
PCDHB9-202ENST00000623266 CCDC152Q4G0S7 254 aa11.76□□□□□ -0.53
PCDHB9-202ENST00000623266 HHIPL1Q96JK4 782 aa11.76□□□□□ -0.53
PCDHB9-202ENST00000623266 GMLQ99445 158 aa11.76□□□□□ -0.53
PCDHB9-202ENST00000623266 ANKIB1Q9P2G1 1089 aa11.76□□□□□ -0.53
PCDHB9-202ENST00000623266 DDX58O95786 925 aaKnown RBP11.75□□□□□ -0.53
PCDHB9-202ENST00000623266 RPS12P25398 132 aaKnown RBP11.75□□□□□ -0.53
PCDHB9-202ENST00000623266 PAXIP1Q6ZW49 1069 aaPredicted RBP11.75□□□□□ -0.53
PCDHB9-202ENST00000623266 ZNF408Q9H9D4 720 aa11.75□□□□□ -0.53
PCDHB9-202ENST00000623266 TSKSQ9UJT2 592 aa11.75□□□□□ -0.53
PCDHB9-202ENST00000623266 GGA1Q9UJY5 639 aa11.75□□□□□ -0.53
PCDHB9-202ENST00000623266 MINPP1Q9UNW1 487 aa11.75□□□□□ -0.53
PCDHB9-202ENST00000623266 CASP8AP2Q9UKL3 1982 aa11.75□□□□□ -0.53
PCDHB9-202ENST00000623266 ASTN2O75129 1339 aaPredicted RBP11.75□□□□□ -0.53
PCDHB9-202ENST00000623266 THSD7BQ9C0I4 1608 aa11.75□□□□□ -0.53
PCDHB9-202ENST00000623266 PSME4Q14997 1843 aa11.74□□□□□ -0.53
PCDHB9-202ENST00000623266 MYH3P11055 1940 aa11.74□□□□□ -0.53
PCDHB9-202ENST00000623266 NEURL1BA8MQ27 555 aa11.74□□□□□ -0.53
PCDHB9-202ENST00000623266 VAMP4O75379 141 aa11.74□□□□□ -0.53
PCDHB9-202ENST00000623266 UFL1O94874 794 aa11.74□□□□□ -0.53
PCDHB9-202ENST00000623266 HSP90B1P14625 803 aaKnown RBP11.74□□□□□ -0.53
PCDHB9-202ENST00000623266 CASP7P55210 303 aa11.74□□□□□ -0.53
PCDHB9-202ENST00000623266 TWISTNBQ3B726 338 aaPredicted RBP11.74□□□□□ -0.53
PCDHB9-202ENST00000623266 NCBP3Q53F19 620 aaKnown RBP11.74□□□□□ -0.53
PCDHB9-202ENST00000623266 TXNRD3Q86VQ6 643 aa11.74□□□□□ -0.53
PCDHB9-202ENST00000623266 ANKRD18AQ8IVF6 992 aa11.74□□□□□ -0.53
PCDHB9-202ENST00000623266 CHMP4AQ9BY43 222 aa11.74□□□□□ -0.53
PCDHB9-202ENST00000623266 GREM2Q9H772 168 aa11.74□□□□□ -0.53
PCDHB9-202ENST00000623266 FAM155AB1AL88 458 aaPredicted RBP11.73□□□□□ -0.53
PCDHB9-202ENST00000623266 ADM5C9JUS6 153 aa11.73□□□□□ -0.53
PCDHB9-202ENST00000623266 CACNA1FO60840 1977 aa11.73□□□□□ -0.53
PCDHB9-202ENST00000623266 CTSWP56202 376 aa11.73□□□□□ -0.53
PCDHB9-202ENST00000623266 ZNF280AP59817 542 aaPredicted RBP11.73□□□□□ -0.53
PCDHB9-202ENST00000623266 RSBN1LQ6PCB5 846 aaPredicted RBP11.73□□□□□ -0.53
PCDHB9-202ENST00000623266 KRT26Q7Z3Y9 468 aa11.73□□□□□ -0.53
PCDHB9-202ENST00000623266 SPINK5Q9NQ38 1064 aaPredicted RBP11.73□□□□□ -0.53
PCDHB9-202ENST00000623266 BSDC1Q9NW68 430 aaPredicted RBP11.73□□□□□ -0.53
PCDHB9-202ENST00000623266 XDHP47989 1333 aa11.72□□□□□ -0.53
PCDHB9-202ENST00000623266 IL16Q14005 1332 aa11.72□□□□□ -0.53
PCDHB9-202ENST00000623266 CSF1RP07333 972 aa11.72□□□□□ -0.53
PCDHB9-202ENST00000623266 ATP2B4P23634 1241 aa11.72□□□□□ -0.53
PCDHB9-202ENST00000623266 HUNKP57058 714 aa11.72□□□□□ -0.53
PCDHB9-202ENST00000623266 SCARF1Q14162 830 aa11.72□□□□□ -0.53
PCDHB9-202ENST00000623266 PODNQ7Z5L7 613 aa11.72□□□□□ -0.53
PCDHB9-202ENST00000623266 AGBL3Q8NEM8 1001 aa11.72□□□□□ -0.53
PCDHB9-202ENST00000623266 DCPSQ96C86 337 aaKnown RBP11.72□□□□□ -0.53
PCDHB9-202ENST00000623266 SALL2Q9Y467 1007 aaPredicted RBP11.72□□□□□ -0.53
PCDHB9-202ENST00000623266 ZNF646O15015 1829 aaPredicted RBP11.72□□□□□ -0.53
PCDHB9-202ENST00000623266 SPEF2Q9C093 1822 aa11.72□□□□□ -0.53
PCDHB9-202ENST00000623266 G3V3G9 751 aa11.71□□□□□ -0.53
PCDHB9-202ENST00000623266 CCT4P50991 539 aaKnown RBP11.71□□□□□ -0.53
PCDHB9-202ENST00000623266 GCKRQ14397 625 aa11.71□□□□□ -0.53
PCDHB9-202ENST00000623266 KIF4BQ2VIQ3 1234 aa11.71□□□□□ -0.53
PCDHB9-202ENST00000623266 DCAF8Q5TAQ9 597 aa11.71□□□□□ -0.53
PCDHB9-202ENST00000623266 UBE3BQ7Z3V4 1068 aa11.71□□□□□ -0.53
PCDHB9-202ENST00000623266 ABHD8Q96I13 439 aa11.71□□□□□ -0.53
PCDHB9-202ENST00000623266 MXD3Q9BW11 206 aa11.71□□□□□ -0.53
PCDHB9-202ENST00000623266 PLA2G12BQ9BX93 195 aa11.71□□□□□ -0.53
PCDHB9-202ENST00000623266 STK31Q9BXU1 1019 aa11.71□□□□□ -0.53
PCDHB9-202ENST00000623266 SCAF8Q9UPN6 1271 aaKnown RBP11.71□□□□□ -0.53
PCDHB9-202ENST00000623266 USP17L3A6NCW0 530 aa11.7□□□□□ -0.54
PCDHB9-202ENST00000623266 USP17L4A6NCW7 530 aa11.7□□□□□ -0.54
PCDHB9-202ENST00000623266 BRPF1P55201 1214 aaPredicted RBP11.7□□□□□ -0.54
PCDHB9-202ENST00000623266 EXOSC9Q06265 439 aaKnown RBP11.7□□□□□ -0.54
PCDHB9-202ENST00000623266 NEXNQ0ZGT2 675 aa11.7□□□□□ -0.54
PCDHB9-202ENST00000623266 FLIIQ13045 1269 aa11.7□□□□□ -0.54
PCDHB9-202ENST00000623266 RGMBQ6NW40 437 aa11.7□□□□□ -0.54
PCDHB9-202ENST00000623266 USP17L1Q7RTZ2 530 aa11.7□□□□□ -0.54
PCDHB9-202ENST00000623266 WDR63Q8IWG1 891 aa11.7□□□□□ -0.54
PCDHB9-202ENST00000623266 C2orf69Q8N8R5 385 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms