RNA–Protein interactions for RNA: ENST00000622934.3

SMIM11B-203, Transcript of small integral membrane protein 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11B, Length 1,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-203ENST00000622934 MAP3K7O43318 606 aa10.28□□□□□ -0.76
SMIM11B-203ENST00000622934 IL6STP40189 918 aaPredicted RBP10.28□□□□□ -0.76
SMIM11B-203ENST00000622934 KIF23Q02241 960 aaPredicted RBP10.28□□□□□ -0.76
SMIM11B-203ENST00000622934 NIM1KQ8IY84 436 aa10.28□□□□□ -0.76
SMIM11B-203ENST00000622934 PCDHGA10Q9Y5H3 936 aa10.28□□□□□ -0.76
SMIM11B-203ENST00000622934 MRC1P22897 1456 aa10.28□□□□□ -0.76
SMIM11B-203ENST00000622934 FAM155AB1AL88 458 aaPredicted RBP10.27□□□□□ -0.77
SMIM11B-203ENST00000622934 TTC5Q8N0Z6 440 aa10.27□□□□□ -0.77
SMIM11B-203ENST00000622934 SLC17A8Q8NDX2 589 aa10.27□□□□□ -0.77
SMIM11B-203ENST00000622934 TMUB1Q9BVT8 246 aa10.27□□□□□ -0.77
SMIM11B-203ENST00000622934 TEX13AQ9BXU3 409 aaPredicted RBP10.27□□□□□ -0.77
SMIM11B-203ENST00000622934 PGAP2Q9UHJ9 254 aa10.27□□□□□ -0.77
SMIM11B-203ENST00000622934 CAMTA2O94983 1202 aa10.26□□□□□ -0.77
SMIM11B-203ENST00000622934 ZNF157P51786 506 aaPredicted RBP10.26□□□□□ -0.77
SMIM11B-203ENST00000622934 TPTE2Q6XPS3 522 aa10.26□□□□□ -0.77
SMIM11B-203ENST00000622934 C2orf69Q8N8R5 385 aa10.26□□□□□ -0.77
SMIM11B-203ENST00000622934 CARD14Q9BXL6 1004 aa10.26□□□□□ -0.77
SMIM11B-203ENST00000622934 ZNF652Q9Y2D9 606 aa10.26□□□□□ -0.77
SMIM11B-203ENST00000622934 TRIOBPQ9H2D6 2365 aa10.26□□□□□ -0.77
SMIM11B-203ENST00000622934 CDHR2Q9BYE9 1310 aa10.26□□□□□ -0.77
SMIM11B-203ENST00000622934 COL4A5P29400 1685 aa10.25□□□□□ -0.77
SMIM11B-203ENST00000622934 RNMTO43148 476 aaKnown RBP10.25□□□□□ -0.77
SMIM11B-203ENST00000622934 TNNT2P45379 298 aaPredicted RBP10.25□□□□□ -0.77
SMIM11B-203ENST00000622934 TSR1Q2NL82 804 aaKnown RBP10.25□□□□□ -0.77
SMIM11B-203ENST00000622934 FBXO46Q6PJ61 603 aaPredicted RBP10.25□□□□□ -0.77
SMIM11B-203ENST00000622934 AEBP1Q8IUX7 1158 aa10.25□□□□□ -0.77
SMIM11B-203ENST00000622934 SLAIN1Q8ND83 568 aa10.25□□□□□ -0.77
SMIM11B-203ENST00000622934 GBA2Q9HCG7 927 aaPredicted RBP10.25□□□□□ -0.77
SMIM11B-203ENST00000622934 SNED1Q8TER0 1413 aa10.24□□□□□ -0.77
SMIM11B-203ENST00000622934 CLCN1P35523 988 aa10.24□□□□□ -0.77
SMIM11B-203ENST00000622934 FLIIQ13045 1269 aa10.24□□□□□ -0.77
SMIM11B-203ENST00000622934 SULT6B1Q6IMI4 303 aa10.24□□□□□ -0.77
SMIM11B-203ENST00000622934 TYW1BQ6NUM6 668 aa10.24□□□□□ -0.77
SMIM11B-203ENST00000622934 CLEC4GQ6UXB4 293 aa10.24□□□□□ -0.77
SMIM11B-203ENST00000622934 DZIP3Q86Y13 1208 aaKnown RBP10.24□□□□□ -0.77
SMIM11B-203ENST00000622934 CSRNP1Q96S65 589 aa10.24□□□□□ -0.77
SMIM11B-203ENST00000622934 LGR6Q9HBX8 967 aa10.24□□□□□ -0.77
SMIM11B-203ENST00000622934 PCDHGA4Q9Y5G9 962 aa10.24□□□□□ -0.77
SMIM11B-203ENST00000622934 NPC1L1Q9UHC9 1359 aa10.24□□□□□ -0.77
SMIM11B-203ENST00000622934 UBR2Q8IWV8 1755 aa10.24□□□□□ -0.77
SMIM11B-203ENST00000622934 PPIP5K2O43314 1243 aa10.23□□□□□ -0.77
SMIM11B-203ENST00000622934 SLC10A3P09131 477 aa10.23□□□□□ -0.77
SMIM11B-203ENST00000622934 GTF2E1P29083 439 aaPredicted RBP10.23□□□□□ -0.77
SMIM11B-203ENST00000622934 GMPSP49915 693 aaPredicted RBP10.23□□□□□ -0.77
SMIM11B-203ENST00000622934 USP48Q86UV5 1035 aa10.23□□□□□ -0.77
SMIM11B-203ENST00000622934 PHOX2BQ99453 314 aa10.23□□□□□ -0.77
SMIM11B-203ENST00000622934 BCL2L13Q9BXK5 485 aa10.23□□□□□ -0.77
SMIM11B-203ENST00000622934 GPCPD1Q9NPB8 672 aa10.23□□□□□ -0.77
SMIM11B-203ENST00000622934 CEP290O15078 2479 aa10.23□□□□□ -0.77
SMIM11B-203ENST00000622934 SZT2Q5T011 3432 aa10.22□□□□□ -0.77
SMIM11B-203ENST00000622934 INTS3Q68E01 1043 aaKnown RBP10.22□□□□□ -0.77
SMIM11B-203ENST00000622934 ZNF296Q8WUU4 475 aaPredicted RBP10.22□□□□□ -0.77
SMIM11B-203ENST00000622934 FBXW7Q969H0 707 aa10.22□□□□□ -0.77
SMIM11B-203ENST00000622934 PCMTD1Q96MG8 357 aaPredicted RBP10.22□□□□□ -0.77
SMIM11B-203ENST00000622934 TMX4Q9H1E5 349 aaPredicted RBP10.22□□□□□ -0.77
SMIM11B-203ENST00000622934 VPS33BQ9H267 617 aa10.22□□□□□ -0.77
SMIM11B-203ENST00000622934 HEG1Q9ULI3 1381 aa10.22□□□□□ -0.77
SMIM11B-203ENST00000622934 KIAA0100Q14667 2235 aaKnown RBP10.21□□□□□ -0.77
SMIM11B-203ENST00000622934 H7C1D1 291 aa10.21□□□□□ -0.77
SMIM11B-203ENST00000622934 MDM2Q00987 491 aaPredicted RBP10.21□□□□□ -0.77
SMIM11B-203ENST00000622934 CXCL9Q07325 125 aa10.21□□□□□ -0.77
SMIM11B-203ENST00000622934 SH3D19Q5HYK7 790 aa10.21□□□□□ -0.77
SMIM11B-203ENST00000622934 KRT26Q7Z3Y9 468 aa10.21□□□□□ -0.77
SMIM11B-203ENST00000622934 TRPM4Q8TD43 1214 aa10.21□□□□□ -0.77
SMIM11B-203ENST00000622934 RPGRQ92834 1020 aaKnown RBP10.21□□□□□ -0.77
SMIM11B-203ENST00000622934 ZNRF3Q9ULT6 936 aa10.21□□□□□ -0.77
SMIM11B-203ENST00000622934 CLSPNQ9HAW4 1339 aa10.21□□□□□ -0.78
SMIM11B-203ENST00000622934 A1BGP04217 495 aa10.2□□□□□ -0.78
SMIM11B-203ENST00000622934 HIRAP54198 1017 aaPredicted RBP10.2□□□□□ -0.78
SMIM11B-203ENST00000622934 TNIP1Q15025 636 aa10.2□□□□□ -0.78
SMIM11B-203ENST00000622934 AOC3Q16853 763 aa10.2□□□□□ -0.78
SMIM11B-203ENST00000622934 NOM1Q5C9Z4 860 aaKnown RBP10.2□□□□□ -0.78
SMIM11B-203ENST00000622934 ZNF496Q96IT1 587 aaPredicted RBP10.2□□□□□ -0.78
SMIM11B-203ENST00000622934 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.2□□□□□ -0.78
SMIM11B-203ENST00000622934 NIP7Q9Y221 180 aaKnown RBP eCLIP10.2□□□□□ -0.78
SMIM11B-203ENST00000622934 FAM177BA6PVY3 158 aa10.19□□□□□ -0.78
SMIM11B-203ENST00000622934 CRY2Q49AN0 593 aa10.19□□□□□ -0.78
SMIM11B-203ENST00000622934 SUPT20HQ8NEM7 779 aa10.19□□□□□ -0.78
SMIM11B-203ENST00000622934 CNOT7Q9UIV1 285 aaKnown RBP10.19□□□□□ -0.78
SMIM11B-203ENST00000622934 PPEF1O14829 653 aaPredicted RBP10.18□□□□□ -0.78
SMIM11B-203ENST00000622934 ZNF790Q6PG37 636 aa10.18□□□□□ -0.78
SMIM11B-203ENST00000622934 DCPSQ96C86 337 aaKnown RBP10.18□□□□□ -0.78
SMIM11B-203ENST00000622934 FMNL2Q96PY5 1086 aa10.18□□□□□ -0.78
SMIM11B-203ENST00000622934 NYXQ9GZU5 481 aa10.18□□□□□ -0.78
SMIM11B-203ENST00000622934 KIF7Q2M1P5 1343 aa10.17□□□□□ -0.78
SMIM11B-203ENST00000622934 GPR25O00155 361 aa10.17□□□□□ -0.78
SMIM11B-203ENST00000622934 FKTNO75072 461 aa10.17□□□□□ -0.78
SMIM11B-203ENST00000622934 TBC1D8O95759 1140 aa10.17□□□□□ -0.78
SMIM11B-203ENST00000622934 HOXA10P31260 410 aaPredicted RBP10.17□□□□□ -0.78
SMIM11B-203ENST00000622934 SSTR3P32745 418 aaPredicted RBP10.17□□□□□ -0.78
SMIM11B-203ENST00000622934 FOSBP53539 338 aa10.17□□□□□ -0.78
SMIM11B-203ENST00000622934 TEFQ10587 303 aa10.17□□□□□ -0.78
SMIM11B-203ENST00000622934 METTL3Q86U44 580 aaKnown RBP10.17□□□□□ -0.78
SMIM11B-203ENST00000622934 RASAL3Q86YV0 1011 aa10.17□□□□□ -0.78
SMIM11B-203ENST00000622934 RBM17Q96I25 401 aaKnown RBP10.17□□□□□ -0.78
SMIM11B-203ENST00000622934 COL6A3P12111 3177 aa10.16□□□□□ -0.78
SMIM11B-203ENST00000622934 HTTP42858 3142 aa10.16□□□□□ -0.78
SMIM11B-203ENST00000622934 CENPFP49454 3210 aa10.16□□□□□ -0.78
SMIM11B-203ENST00000622934 RAD17O75943 681 aa10.16□□□□□ -0.78
SMIM11B-203ENST00000622934 DLK2Q6UY11 383 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms