RNA–Protein interactions for RNA: ENST00000622827.4

CDH23-214, Transcript of cadherin related 23, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDH23, Length 11,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-214ENST00000622827 ERMNQ8TAM6 284 aa16.38■□□□□ 0.21
CDH23-214ENST00000622827 CASQ2O14958 399 aaPredicted RBP16.38■□□□□ 0.21
CDH23-214ENST00000622827 SPAG1Q07617 926 aa16.38■□□□□ 0.21
CDH23-214ENST00000622827 CRACR2BQ8N4Y2 399 aaPredicted RBP16.38■□□□□ 0.21
CDH23-214ENST00000622827 GBP7Q8N8V2 638 aaPredicted RBP16.38■□□□□ 0.21
CDH23-214ENST00000622827 LZTFL1Q9NQ48 299 aa16.38■□□□□ 0.21
CDH23-214ENST00000622827 ORC3Q9UBD5 711 aaPredicted RBP16.38■□□□□ 0.21
CDH23-214ENST00000622827 NCAPD3P42695 1498 aa16.37■□□□□ 0.21
CDH23-214ENST00000622827 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
CDH23-214ENST00000622827 TMEM110-MUSTN1A8MSY1 372 aa16.37■□□□□ 0.21
CDH23-214ENST00000622827 MTRF1LQ9UGC7 380 aaKnown RBP16.37■□□□□ 0.21
CDH23-214ENST00000622827 PRIM1P49642 420 aaKnown RBP16.37■□□□□ 0.21
CDH23-214ENST00000622827 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.37■□□□□ 0.21
CDH23-214ENST00000622827 GNAT3A8MTJ3 354 aa16.37■□□□□ 0.21
CDH23-214ENST00000622827 TTF1Q15361 905 aaPredicted RBP16.37■□□□□ 0.21
CDH23-214ENST00000622827 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
CDH23-214ENST00000622827 ATP2A2P16615 1042 aaKnown RBP16.37■□□□□ 0.21
CDH23-214ENST00000622827 AFMP43652 599 aa16.37■□□□□ 0.21
CDH23-214ENST00000622827 CCDC174Q6PII3 467 aa16.37■□□□□ 0.21
CDH23-214ENST00000622827 SLC12A5Q9H2X9 1139 aa16.37■□□□□ 0.21
CDH23-214ENST00000622827 ATP5DP30049 168 aa16.37■□□□□ 0.21
CDH23-214ENST00000622827 MIS18AQ9NYP9 233 aa16.37■□□□□ 0.21
CDH23-214ENST00000622827 CHMP4BP1P59074 171 aa16.37■□□□□ 0.21
CDH23-214ENST00000622827 TTC22Q5TAA0 569 aa16.37■□□□□ 0.21
CDH23-214ENST00000622827 MRPS27Q92552 414 aaKnown RBP16.37■□□□□ 0.21
CDH23-214ENST00000622827 CCDC170Q8IYT3 715 aa16.36■□□□□ 0.21
CDH23-214ENST00000622827 BICD1Q96G01 975 aa16.36■□□□□ 0.21
CDH23-214ENST00000622827 MMRN2Q9H8L6 949 aa16.36■□□□□ 0.21
CDH23-214ENST00000622827 DNAJC25Q9H1X3 360 aa16.36■□□□□ 0.21
CDH23-214ENST00000622827 VIMP08670 466 aaKnown RBP16.36■□□□□ 0.21
CDH23-214ENST00000622827 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
CDH23-214ENST00000622827 RNF168Q8IYW5 571 aaPredicted RBP16.36■□□□□ 0.21
CDH23-214ENST00000622827 SUDS3Q9H7L9 328 aaPredicted RBP16.36■□□□□ 0.21
CDH23-214ENST00000622827 CAMSAP2Q08AD1 1489 aa16.36■□□□□ 0.21
CDH23-214ENST00000622827 EEF2P13639 858 aaKnown RBP16.36■□□□□ 0.21
CDH23-214ENST00000622827 TTC36A6NLP5 189 aa16.36■□□□□ 0.21
CDH23-214ENST00000622827 SLC26A6Q9BXS9 759 aa16.36■□□□□ 0.21
CDH23-214ENST00000622827 CCDC141Q6ZP82 1450 aa16.36■□□□□ 0.21
CDH23-214ENST00000622827 NUF2Q9BZD4 464 aa16.36■□□□□ 0.21
CDH23-214ENST00000622827 PPP1R12CQ9BZL4 782 aa16.36■□□□□ 0.21
CDH23-214ENST00000622827 PDE1CQ14123 709 aaPredicted RBP16.36■□□□□ 0.21
CDH23-214ENST00000622827 RFC1P35251 1148 aaPredicted RBP16.36■□□□□ 0.21
CDH23-214ENST00000622827 UBXN1Q04323 297 aa16.35■□□□□ 0.21
CDH23-214ENST00000622827 KARSQ15046 597 aaKnown RBP16.35■□□□□ 0.21
CDH23-214ENST00000622827 PPP1R7Q15435 360 aa16.35■□□□□ 0.21
CDH23-214ENST00000622827 RRS1Q15050 365 aaKnown RBP16.35■□□□□ 0.21
CDH23-214ENST00000622827 CAVIN4Q5BKX8 364 aa16.35■□□□□ 0.21
CDH23-214ENST00000622827 IFIT1P09914 478 aaKnown RBP16.35■□□□□ 0.21
CDH23-214ENST00000622827 FYB2Q5VWT5 728 aa16.35■□□□□ 0.21
CDH23-214ENST00000622827 SF3B2Q13435 895 aaKnown RBP16.35■□□□□ 0.21
CDH23-214ENST00000622827 RABGAP1Q9Y3P9 1069 aa16.35■□□□□ 0.21
CDH23-214ENST00000622827 C11orf95C9JLR9 678 aaPredicted RBP16.35■□□□□ 0.21
CDH23-214ENST00000622827 SLC5A1P13866 664 aa16.35■□□□□ 0.21
CDH23-214ENST00000622827 ZNF569Q5MCW4 686 aa16.35■□□□□ 0.21
CDH23-214ENST00000622827 SH2D4BQ5SQS7 431 aa16.35■□□□□ 0.21
CDH23-214ENST00000622827 CFAP70Q5T0N1 1121 aa16.35■□□□□ 0.21
CDH23-214ENST00000622827 ESCO1Q5FWF5 840 aa16.35■□□□□ 0.21
CDH23-214ENST00000622827 LMOD1P29536 600 aaPredicted RBP16.35■□□□□ 0.21
CDH23-214ENST00000622827 ITSN2Q9NZM3 1697 aa16.35■□□□□ 0.21
CDH23-214ENST00000622827 IARSP41252 1262 aaKnown RBP16.34■□□□□ 0.21
CDH23-214ENST00000622827 TERF1P54274 439 aa16.34■□□□□ 0.21
CDH23-214ENST00000622827 CCDC14Q49A88 953 aa16.34■□□□□ 0.21
CDH23-214ENST00000622827 RBM28Q9NW13 759 aaKnown RBP16.34■□□□□ 0.21
CDH23-214ENST00000622827 TNNC1P63316 161 aa16.34■□□□□ 0.21
CDH23-214ENST00000622827 GABPB1Q06547 395 aaPredicted RBP16.34■□□□□ 0.21
CDH23-214ENST00000622827 CCDC62Q6P9F0 684 aa16.34■□□□□ 0.21
CDH23-214ENST00000622827 ANKIB1Q9P2G1 1089 aa16.34■□□□□ 0.21
CDH23-214ENST00000622827 MRVI1Q9Y6F6 885 aa16.34■□□□□ 0.21
CDH23-214ENST00000622827 NDUFAB1O14561 156 aa16.34■□□□□ 0.21
CDH23-214ENST00000622827 MAP2K2P36507 400 aa16.34■□□□□ 0.21
CDH23-214ENST00000622827 RTEL1-TNFRSF6BF6WH68 1400 aa16.34■□□□□ 0.21
CDH23-214ENST00000622827 ARHGAP25P42331 645 aa16.34■□□□□ 0.21
CDH23-214ENST00000622827 BMP15O95972 392 aa16.34■□□□□ 0.21
CDH23-214ENST00000622827 CABP1Q9NZU7 370 aa16.34■□□□□ 0.21
CDH23-214ENST00000622827 GOLGA6CA6NDK9 693 aa16.34■□□□□ 0.21
CDH23-214ENST00000622827 GOLGA6DP0CG33 693 aa16.34■□□□□ 0.21
CDH23-214ENST00000622827 RGS22Q8NE09 1264 aa16.34■□□□□ 0.21
CDH23-214ENST00000622827 GOLGA6AQ9NYA3 693 aa16.34■□□□□ 0.21
CDH23-214ENST00000622827 WHAMMP3Q1A5X7 153 aa16.33■□□□□ 0.21
CDH23-214ENST00000622827 NEDD9Q14511 834 aa16.33■□□□□ 0.21
CDH23-214ENST00000622827 MFSD6Q6ZSS7 791 aa16.33■□□□□ 0.2
CDH23-214ENST00000622827 TRIM27P14373 513 aa16.33■□□□□ 0.2
CDH23-214ENST00000622827 PSMA7O14818 248 aa16.33■□□□□ 0.2
CDH23-214ENST00000622827 ATAD2Q6PL18 1390 aa16.33■□□□□ 0.2
CDH23-214ENST00000622827 PTPRCP08575 1304 aa16.33■□□□□ 0.2
CDH23-214ENST00000622827 IFIT5Q13325 482 aaKnown RBP16.33■□□□□ 0.2
CDH23-214ENST00000622827 CCDC184Q52MB2 194 aa16.33■□□□□ 0.2
CDH23-214ENST00000622827 CEP128Q6ZU80 1094 aa16.33■□□□□ 0.2
CDH23-214ENST00000622827 MCUR1Q96AQ8 359 aa16.33■□□□□ 0.2
CDH23-214ENST00000622827 CCDC42Q96M95 316 aa16.33■□□□□ 0.2
CDH23-214ENST00000622827 ZNF365Q70YC5 407 aa16.32■□□□□ 0.2
CDH23-214ENST00000622827 CCDC38Q502W7 563 aa16.32■□□□□ 0.2
CDH23-214ENST00000622827 ERO1AQ96HE7 468 aa16.32■□□□□ 0.2
CDH23-214ENST00000622827 GJC1P36383 396 aa16.32■□□□□ 0.2
CDH23-214ENST00000622827 PHLDB2Q86SQ0 1253 aa16.32■□□□□ 0.2
CDH23-214ENST00000622827 TMX3Q96JJ7 454 aa16.32■□□□□ 0.2
CDH23-214ENST00000622827 EVCP57679 992 aa16.32■□□□□ 0.2
CDH23-214ENST00000622827 ASIC1P78348 528 aa16.32■□□□□ 0.2
CDH23-214ENST00000622827 MCM10Q7L590 875 aa16.32■□□□□ 0.2
CDH23-214ENST00000622827 VCXQ9H320 206 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms