RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 RPS12P25398 132 aaKnown RBP30.76■■■□□ 2.51
CPSF1-214ENST00000622776 ABHD8Q96I13 439 aa30.76■■■□□ 2.51
CPSF1-214ENST00000622776 TBC1D10BQ4KMP7 808 aaPredicted RBP30.75■■■□□ 2.51
CPSF1-214ENST00000622776 CCDC191Q8NCU4 936 aa30.75■■■□□ 2.51
CPSF1-214ENST00000622776 RTL9Q8NET4 1388 aa30.75■■■□□ 2.51
CPSF1-214ENST00000622776 C8orf58Q8NAV2 365 aa30.74■■■□□ 2.51
CPSF1-214ENST00000622776 ZC3H12CQ9C0D7 883 aaKnown RBP30.74■■■□□ 2.51
CPSF1-214ENST00000622776 PODXL2Q9NZ53 605 aa30.74■■■□□ 2.51
CPSF1-214ENST00000622776 EGFRP00533 1210 aa30.73■■■□□ 2.51
CPSF1-214ENST00000622776 PCCAP05165 728 aaPredicted RBP30.73■■■□□ 2.51
CPSF1-214ENST00000622776 DLK2Q6UY11 383 aa30.73■■■□□ 2.51
CPSF1-214ENST00000622776 TSKSQ9UJT2 592 aa30.73■■■□□ 2.51
CPSF1-214ENST00000622776 CCDC152Q4G0S7 254 aa30.72■■■□□ 2.51
CPSF1-214ENST00000622776 CWC25Q9NXE8 425 aaPredicted RBP30.72■■■□□ 2.51
CPSF1-214ENST00000622776 PDE8AO60658 829 aa30.71■■■□□ 2.51
CPSF1-214ENST00000622776 RBM26Q5T8P6 1007 aaKnown RBP30.71■■■□□ 2.51
CPSF1-214ENST00000622776 KRT26Q7Z3Y9 468 aa30.71■■■□□ 2.51
CPSF1-214ENST00000622776 JARID2Q92833 1246 aaPredicted RBP30.71■■■□□ 2.51
CPSF1-214ENST00000622776 ANKIB1Q9P2G1 1089 aa30.71■■■□□ 2.51
CPSF1-214ENST00000622776 POLR2AP24928 1970 aaKnown RBP30.7■■■□□ 2.51
CPSF1-214ENST00000622776 CA12O43570 354 aa30.7■■■□□ 2.51
CPSF1-214ENST00000622776 UFL1O94874 794 aa30.7■■■□□ 2.51
CPSF1-214ENST00000622776 BRPF1P55201 1214 aaPredicted RBP30.7■■■□□ 2.51
CPSF1-214ENST00000622776 METTL22Q9BUU2 404 aaPredicted RBP30.7■■■□□ 2.51
CPSF1-214ENST00000622776 GGA1Q9UJY5 639 aa30.7■■■□□ 2.51
CPSF1-214ENST00000622776 DDX58O95786 925 aaKnown RBP30.69■■■□□ 2.5
CPSF1-214ENST00000622776 VIL1P09327 827 aaKnown RBP30.69■■■□□ 2.5
CPSF1-214ENST00000622776 HUNKP57058 714 aa30.69■■■□□ 2.5
CPSF1-214ENST00000622776 CCDC30Q5VVM6 783 aa30.69■■■□□ 2.5
CPSF1-214ENST00000622776 CHMP4AQ9BY43 222 aa30.69■■■□□ 2.5
CPSF1-214ENST00000622776 G3V3G9 751 aa30.68■■■□□ 2.5
CPSF1-214ENST00000622776 DCAF8Q5TAQ9 597 aa30.68■■■□□ 2.5
CPSF1-214ENST00000622776 DCPSQ96C86 337 aaKnown RBP30.68■■■□□ 2.5
CPSF1-214ENST00000622776 CCDC85AQ96PX6 553 aaPredicted RBP30.68■■■□□ 2.5
CPSF1-214ENST00000622776 SCN9AQ15858 1988 aa30.68■■■□□ 2.5
CPSF1-214ENST00000622776 NOGQ13253 232 aa30.67■■■□□ 2.5
CPSF1-214ENST00000622776 KIF4BQ2VIQ3 1234 aa30.66■■■□□ 2.5
CPSF1-214ENST00000622776 ADM5C9JUS6 153 aa30.65■■■□□ 2.5
CPSF1-214ENST00000622776 TSPYL6Q8N831 410 aa30.65■■■□□ 2.5
CPSF1-214ENST00000622776 ZIC5Q96T25 663 aa30.65■■■□□ 2.5
CPSF1-214ENST00000622776 GBA2Q9HCG7 927 aaPredicted RBP30.65■■■□□ 2.5
CPSF1-214ENST00000622776 MAP3K2Q9Y2U5 619 aa30.65■■■□□ 2.5
CPSF1-214ENST00000622776 ANKRD18AQ8IVF6 992 aa30.64■■■□□ 2.5
CPSF1-214ENST00000622776 C2orf69Q8N8R5 385 aa30.63■■■□□ 2.49
CPSF1-214ENST00000622776 XDHP47989 1333 aa30.63■■■□□ 2.49
CPSF1-214ENST00000622776 RGMBQ6NW40 437 aa30.62■■■□□ 2.49
CPSF1-214ENST00000622776 KSR2Q6VAB6 950 aa30.62■■■□□ 2.49
CPSF1-214ENST00000622776 CASP8AP2Q9UKL3 1982 aa30.61■■■□□ 2.49
CPSF1-214ENST00000622776 RSBN1LQ6PCB5 846 aaPredicted RBP30.61■■■□□ 2.49
CPSF1-214ENST00000622776 GGA3Q9NZ52 723 aa30.61■■■□□ 2.49
CPSF1-214ENST00000622776 PI4KAP2A4QPH2 592 aa30.6■■■□□ 2.49
CPSF1-214ENST00000622776 IGKV5-2P06315 115 aa30.6■■■□□ 2.49
CPSF1-214ENST00000622776 SULF1Q8IWU6 871 aa30.6■■■□□ 2.49
CPSF1-214ENST00000622776 PI4KAP1Q8N8J0 262 aa30.6■■■□□ 2.49
CPSF1-214ENST00000622776 AGBL3Q8NEM8 1001 aa30.6■■■□□ 2.49
CPSF1-214ENST00000622776 ASTN2O75129 1339 aaPredicted RBP30.59■■■□□ 2.49
CPSF1-214ENST00000622776 ATP2B4P23634 1241 aa30.59■■■□□ 2.49
CPSF1-214ENST00000622776 CTSWP56202 376 aa30.59■■■□□ 2.49
CPSF1-214ENST00000622776 ZNF280AP59817 542 aaPredicted RBP30.59■■■□□ 2.49
CPSF1-214ENST00000622776 CDC5LQ99459 802 aaKnown RBP30.59■■■□□ 2.49
CPSF1-214ENST00000622776 ZNF609O15014 1411 aa30.58■■■□□ 2.49
CPSF1-214ENST00000622776 CCDC85CA6NKD9 419 aa30.58■■■□□ 2.49
CPSF1-214ENST00000622776 FAM155AB1AL88 458 aaPredicted RBP30.58■■■□□ 2.49
CPSF1-214ENST00000622776 TSR2Q969E8 191 aaKnown RBP30.58■■■□□ 2.49
CPSF1-214ENST00000622776 TTLL11Q8NHH1 800 aa30.57■■■□□ 2.48
CPSF1-214ENST00000622776 CCDC102AQ96A19 550 aa30.57■■■□□ 2.48
CPSF1-214ENST00000622776 STK31Q9BXU1 1019 aa30.57■■■□□ 2.48
CPSF1-214ENST00000622776 NEXNQ0ZGT2 675 aa30.56■■■□□ 2.48
CPSF1-214ENST00000622776 SCARF1Q14162 830 aa30.56■■■□□ 2.48
CPSF1-214ENST00000622776 GMLQ99445 158 aa30.56■■■□□ 2.48
CPSF1-214ENST00000622776 ZNF157P51786 506 aaPredicted RBP30.55■■■□□ 2.48
CPSF1-214ENST00000622776 PODNQ7Z5L7 613 aa30.55■■■□□ 2.48
CPSF1-214ENST00000622776 USP17L3A6NCW0 530 aa30.54■■■□□ 2.48
CPSF1-214ENST00000622776 USP17L4A6NCW7 530 aa30.54■■■□□ 2.48
CPSF1-214ENST00000622776 ANGEL2Q5VTE6 544 aaKnown RBP30.54■■■□□ 2.48
CPSF1-214ENST00000622776 USP17L1Q7RTZ2 530 aa30.54■■■□□ 2.48
CPSF1-214ENST00000622776 CDCA5Q96FF9 252 aa30.54■■■□□ 2.48
CPSF1-214ENST00000622776 MCOLN1Q9GZU1 580 aa30.54■■■□□ 2.48
CPSF1-214ENST00000622776 GREM2Q9H772 168 aa30.54■■■□□ 2.48
CPSF1-214ENST00000622776 BSDC1Q9NW68 430 aaPredicted RBP30.54■■■□□ 2.48
CPSF1-214ENST00000622776 MINPP1Q9UNW1 487 aa30.54■■■□□ 2.48
CPSF1-214ENST00000622776 PSME4Q14997 1843 aa30.53■■■□□ 2.48
CPSF1-214ENST00000622776 WTIPA6NIX2 430 aaPredicted RBP30.53■■■□□ 2.48
CPSF1-214ENST00000622776 USP17L8P0C7I0 530 aa30.53■■■□□ 2.48
CPSF1-214ENST00000622776 KIF23Q02241 960 aaPredicted RBP30.53■■■□□ 2.48
CPSF1-214ENST00000622776 CWF19L2Q2TBE0 894 aaKnown RBP30.53■■■□□ 2.48
CPSF1-214ENST00000622776 CCDC184Q52MB2 194 aa30.53■■■□□ 2.48
CPSF1-214ENST00000622776 NEURL1BA8MQ27 555 aa30.52■■■□□ 2.48
CPSF1-214ENST00000622776 CCDC27Q2M243 656 aa30.52■■■□□ 2.48
CPSF1-214ENST00000622776 MYOZ2Q9NPC6 264 aa30.52■■■□□ 2.48
CPSF1-214ENST00000622776 TWISTNBQ3B726 338 aaPredicted RBP30.51■■■□□ 2.47
CPSF1-214ENST00000622776 FAM161AQ3B820 660 aa30.51■■■□□ 2.47
CPSF1-214ENST00000622776 G2E3Q7L622 706 aa30.51■■■□□ 2.47
CPSF1-214ENST00000622776 WWC1Q8IX03 1113 aa30.51■■■□□ 2.47
CPSF1-214ENST00000622776 MED23Q9ULK4 1368 aa30.5■■■□□ 2.47
CPSF1-214ENST00000622776 H7C1W4 665 aa30.49■■■□□ 2.47
CPSF1-214ENST00000622776 SLC4A2P04920 1241 aa30.49■■■□□ 2.47
CPSF1-214ENST00000622776 SLC10A3P09131 477 aa30.49■■■□□ 2.47
CPSF1-214ENST00000622776 DGKZQ13574 1117 aa30.49■■■□□ 2.47
CPSF1-214ENST00000622776 UBE3BQ7Z3V4 1068 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms