RNA–Protein interactions for RNA: ENST00000622090.4

DDB2-215, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 5

Gene DDB2, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-215ENST00000622090 HDAC9Q9UKV0 1011 aa16.53■□□□□ 0.24
DDB2-215ENST00000622090 SH3TC1Q8TE82 1336 aa16.52■□□□□ 0.24
DDB2-215ENST00000622090 ANGEL2Q5VTE6 544 aaKnown RBP16.52■□□□□ 0.24
DDB2-215ENST00000622090 TRMT112Q9UI30 125 aaKnown RBP16.52■□□□□ 0.24
DDB2-215ENST00000622090 LAMB1P07942 1786 aa16.51■□□□□ 0.23
DDB2-215ENST00000622090 C6orf229H3BNL8 230 aa16.51■□□□□ 0.23
DDB2-215ENST00000622090 VIL1P09327 827 aaKnown RBP16.51■□□□□ 0.23
DDB2-215ENST00000622090 AIMP1Q12904 312 aaKnown RBP16.51■□□□□ 0.23
DDB2-215ENST00000622090 COPS6Q7L5N1 327 aa16.51■□□□□ 0.23
DDB2-215ENST00000622090 REM2Q8IYK8 340 aaPredicted RBP16.51■□□□□ 0.23
DDB2-215ENST00000622090 PLEKHF1Q96S99 279 aa16.51■□□□□ 0.23
DDB2-215ENST00000622090 R3HDMLQ9H3Y0 253 aa16.51■□□□□ 0.23
DDB2-215ENST00000622090 SPEF2Q9C093 1822 aa16.5■□□□□ 0.23
DDB2-215ENST00000622090 GPR25O00155 361 aa16.5■□□□□ 0.23
DDB2-215ENST00000622090 TCIRG1Q13488 830 aa16.5■□□□□ 0.23
DDB2-215ENST00000622090 SCARF1Q14162 830 aa16.5■□□□□ 0.23
DDB2-215ENST00000622090 PRAMEF18Q5VWM3 479 aa16.5■□□□□ 0.23
DDB2-215ENST00000622090 FBXO46Q6PJ61 603 aaPredicted RBP16.5■□□□□ 0.23
DDB2-215ENST00000622090 TMC4Q7Z404 712 aa16.5■□□□□ 0.23
DDB2-215ENST00000622090 XAGE3Q8WTP9 111 aa16.5■□□□□ 0.23
DDB2-215ENST00000622090 NECTIN2Q92692 538 aa16.5■□□□□ 0.23
DDB2-215ENST00000622090 UBE2Q2LH0YL09 131 aa16.49■□□□□ 0.23
DDB2-215ENST00000622090 ZNF609O15014 1411 aa16.49■□□□□ 0.23
DDB2-215ENST00000622090 TBC1D16Q8TBP0 767 aa16.49■□□□□ 0.23
DDB2-215ENST00000622090 GCC1Q96CN9 775 aa16.49■□□□□ 0.23
DDB2-215ENST00000622090 POTEFA5A3E0 1075 aa16.48■□□□□ 0.23
DDB2-215ENST00000622090 ZNF280AP59817 542 aaPredicted RBP16.48■□□□□ 0.23
DDB2-215ENST00000622090 MKRN3Q13064 507 aaKnown RBP16.48■□□□□ 0.23
DDB2-215ENST00000622090 NFE2L2Q16236 605 aa16.48■□□□□ 0.23
DDB2-215ENST00000622090 TM4SF4P48230 202 aa16.47■□□□□ 0.23
DDB2-215ENST00000622090 HSP90AB3PQ58FF7 597 aa16.47■□□□□ 0.23
DDB2-215ENST00000622090 FAM89AQ96GI7 184 aa16.47■□□□□ 0.23
DDB2-215ENST00000622090 TSPYL4Q9UJ04 414 aa16.47■□□□□ 0.23
DDB2-215ENST00000622090 FXR1P51114 621 aaKnown RBP eCLIP16.46■□□□□ 0.23
DDB2-215ENST00000622090 FKBP1BP68106 108 aa16.46■□□□□ 0.23
DDB2-215ENST00000622090 SF3B3Q15393 1217 aaKnown RBP16.46■□□□□ 0.23
DDB2-215ENST00000622090 NOM1Q5C9Z4 860 aaKnown RBP16.45■□□□□ 0.22
DDB2-215ENST00000622090 RTL5Q5HYW3 569 aaPredicted RBP16.45■□□□□ 0.22
DDB2-215ENST00000622090 RSBN1LQ6PCB5 846 aaPredicted RBP16.45■□□□□ 0.22
DDB2-215ENST00000622090 GMLQ99445 158 aa16.45■□□□□ 0.22
DDB2-215ENST00000622090 EYA3Q99504 573 aa16.45■□□□□ 0.22
DDB2-215ENST00000622090 KIAA0100Q14667 2235 aaKnown RBP16.44■□□□□ 0.22
DDB2-215ENST00000622090 KRT24Q2M2I5 525 aa16.44■□□□□ 0.22
DDB2-215ENST00000622090 MYOZ2Q9NPC6 264 aa16.44■□□□□ 0.22
DDB2-215ENST00000622090 PITPNM2Q9BZ72 1349 aa16.44■□□□□ 0.22
DDB2-215ENST00000622090 ATP5J2-PTCD1G3V325 749 aa16.43■□□□□ 0.22
DDB2-215ENST00000622090 FKTNO75072 461 aa16.43■□□□□ 0.22
DDB2-215ENST00000622090 ISCA1Q9BUE6 129 aa16.43■□□□□ 0.22
DDB2-215ENST00000622090 ZC3H12CQ9C0D7 883 aaKnown RBP16.43■□□□□ 0.22
DDB2-215ENST00000622090 SZT2Q5T011 3432 aa16.42■□□□□ 0.22
DDB2-215ENST00000622090 UFL1O94874 794 aa16.42■□□□□ 0.22
DDB2-215ENST00000622090 RPS8P62241 208 aaKnown RBP16.42■□□□□ 0.22
DDB2-215ENST00000622090 NBPF9Q3BBW0 867 aa16.42■□□□□ 0.22
DDB2-215ENST00000622090 AGBL3Q8NEM8 1001 aa16.42■□□□□ 0.22
DDB2-215ENST00000622090 CFHR5Q9BXR6 569 aa16.42■□□□□ 0.22
DDB2-215ENST00000622090 SEC31BQ9NQW1 1179 aa16.42■□□□□ 0.22
DDB2-215ENST00000622090 PODXL2Q9NZ53 605 aa16.42■□□□□ 0.22
DDB2-215ENST00000622090 ECM29Q5VYK3 1845 aa16.41■□□□□ 0.22
DDB2-215ENST00000622090 MXD3Q9BW11 206 aa16.41■□□□□ 0.22
DDB2-215ENST00000622090 WTIPA6NIX2 430 aaPredicted RBP16.4■□□□□ 0.22
DDB2-215ENST00000622090 NEFMP07197 916 aa16.4■□□□□ 0.22
DDB2-215ENST00000622090 USP17L8P0C7I0 530 aa16.4■□□□□ 0.22
DDB2-215ENST00000622090 PTPN12Q05209 780 aaKnown RBP16.4■□□□□ 0.22
DDB2-215ENST00000622090 TTLL12Q14166 644 aaPredicted RBP16.4■□□□□ 0.22
DDB2-215ENST00000622090 CHPF2Q9P2E5 772 aa16.4■□□□□ 0.22
DDB2-215ENST00000622090 FZD1Q9UP38 647 aa16.4■□□□□ 0.22
DDB2-215ENST00000622090 MYH3P11055 1940 aa16.39■□□□□ 0.21
DDB2-215ENST00000622090 IRS4O14654 1257 aaPredicted RBP16.39■□□□□ 0.21
DDB2-215ENST00000622090 OTOP1Q7RTM1 612 aa16.39■□□□□ 0.21
DDB2-215ENST00000622090 TRIM17Q9Y577 477 aa16.39■□□□□ 0.21
DDB2-215ENST00000622090 G3V3G9 751 aa16.38■□□□□ 0.21
DDB2-215ENST00000622090 EN2P19622 333 aaPredicted RBP16.38■□□□□ 0.21
DDB2-215ENST00000622090 CAP1Q01518 475 aa16.38■□□□□ 0.21
DDB2-215ENST00000622090 PRKG1Q13976 671 aa16.38■□□□□ 0.21
DDB2-215ENST00000622090 DCAF8Q5TAQ9 597 aa16.38■□□□□ 0.21
DDB2-215ENST00000622090 PLBD2Q8NHP8 589 aa16.38■□□□□ 0.21
DDB2-215ENST00000622090 ANKIB1Q9P2G1 1089 aa16.38■□□□□ 0.21
DDB2-215ENST00000622090 GGA1Q9UJY5 639 aa16.38■□□□□ 0.21
DDB2-215ENST00000622090 OTOFQ9HC10 1997 aa16.38■□□□□ 0.21
DDB2-215ENST00000622090 ZSWIM8A7E2V4 1837 aa16.38■□□□□ 0.21
DDB2-215ENST00000622090 SREBF2Q12772 1141 aa16.37■□□□□ 0.21
DDB2-215ENST00000622090 CCER1Q8TC90 406 aaPredicted RBP16.37■□□□□ 0.21
DDB2-215ENST00000622090 USP17L3A6NCW0 530 aa16.36■□□□□ 0.21
DDB2-215ENST00000622090 USP17L4A6NCW7 530 aa16.36■□□□□ 0.21
DDB2-215ENST00000622090 WNT10BO00744 389 aa16.36■□□□□ 0.21
DDB2-215ENST00000622090 SPRYD7Q5W111 196 aa16.36■□□□□ 0.21
DDB2-215ENST00000622090 ANKRD13DQ6ZTN6 518 aa16.36■□□□□ 0.21
DDB2-215ENST00000622090 USP17L1Q7RTZ2 530 aa16.36■□□□□ 0.21
DDB2-215ENST00000622090 COLQQ9Y215 455 aaPredicted RBP16.36■□□□□ 0.21
DDB2-215ENST00000622090 MAPK8IP3Q9UPT6 1336 aa16.36■□□□□ 0.21
DDB2-215ENST00000622090 SSC5DA1L4H1 1573 aa16.35■□□□□ 0.21
DDB2-215ENST00000622090 SASH1O94885 1247 aa16.35■□□□□ 0.21
DDB2-215ENST00000622090 LDLRAD1Q5T700 205 aa16.35■□□□□ 0.21
DDB2-215ENST00000622090 CCDC85AQ96PX6 553 aaPredicted RBP16.35■□□□□ 0.21
DDB2-215ENST00000622090 IGF2BP3O00425 579 aaKnown RBP eCLIP16.34■□□□□ 0.21
DDB2-215ENST00000622090 RIPK4P57078 832 aa16.34■□□□□ 0.21
DDB2-215ENST00000622090 INTS3Q68E01 1043 aaKnown RBP16.34■□□□□ 0.21
DDB2-215ENST00000622090 IFNL1Q8IU54 200 aa16.34■□□□□ 0.21
DDB2-215ENST00000622090 JARID2Q92833 1246 aaPredicted RBP16.34■□□□□ 0.21
DDB2-215ENST00000622090 BABAM1Q9NWV8 329 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms