RNA–Protein interactions for RNA: ENST00000619158.1

CDH11-219, Transcript of cadherin 11, humanhuman

Gene CDH11, Length 3,639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-219ENST00000619158 PIP4K2AP48426 406 aaPredicted RBP6.74□□□□□ -1.33
CDH11-219ENST00000619158 UTP14AQ9BVJ6 771 aaKnown RBP6.74□□□□□ -1.33
CDH11-219ENST00000619158 PARP14Q460N5 1801 aa6.73□□□□□ -1.33
CDH11-219ENST00000619158 MAFGO15525 162 aa6.73□□□□□ -1.33
CDH11-219ENST00000619158 PPP1R42Q7Z4L9 355 aa6.73□□□□□ -1.33
CDH11-219ENST00000619158 FAM9BQ8IZU0 186 aa6.73□□□□□ -1.33
CDH11-219ENST00000619158 VGLL2Q8N8G2 317 aa6.73□□□□□ -1.33
CDH11-219ENST00000619158 CNBD1Q8NA66 436 aa6.73□□□□□ -1.33
CDH11-219ENST00000619158 SETDB2Q96T68 719 aa6.73□□□□□ -1.33
CDH11-219ENST00000619158 DNAAF4Q8WXU2 420 aa6.73□□□□□ -1.33
CDH11-219ENST00000619158 MAP3K2Q9Y2U5 619 aa6.73□□□□□ -1.33
CDH11-219ENST00000619158 SALL2Q9Y467 1007 aaPredicted RBP6.73□□□□□ -1.33
CDH11-219ENST00000619158 SH3TC1Q8TE82 1336 aa6.73□□□□□ -1.33
CDH11-219ENST00000619158 MED23Q9ULK4 1368 aa6.73□□□□□ -1.33
CDH11-219ENST00000619158 COL1A1P02452 1464 aaPredicted RBP6.73□□□□□ -1.33
CDH11-219ENST00000619158 NAV1Q8NEY1 1877 aa6.73□□□□□ -1.33
CDH11-219ENST00000619158 AK9Q5TCS8 1911 aa6.73□□□□□ -1.33
CDH11-219ENST00000619158 NIP7Q9Y221 180 aaKnown RBP eCLIP6.72□□□□□ -1.33
CDH11-219ENST00000619158 PITPNM1O00562 1244 aa6.72□□□□□ -1.33
CDH11-219ENST00000619158 ST5P78524 1137 aa6.72□□□□□ -1.33
CDH11-219ENST00000619158 SOGA3Q5TF21 947 aa6.72□□□□□ -1.33
CDH11-219ENST00000619158 L3MBTL3Q96JM7 780 aaPredicted RBP6.72□□□□□ -1.33
CDH11-219ENST00000619158 ANXA1P04083 346 aa6.72□□□□□ -1.33
CDH11-219ENST00000619158 GRAPQ13588 217 aa6.72□□□□□ -1.33
CDH11-219ENST00000619158 GRAPLQ8TC17 118 aaPredicted RBP6.72□□□□□ -1.33
CDH11-219ENST00000619158 CWC25Q9NXE8 425 aaPredicted RBP6.72□□□□□ -1.33
CDH11-219ENST00000619158 ATP6V0A2Q9Y487 856 aa6.72□□□□□ -1.33
CDH11-219ENST00000619158 A0A0G2JMZ2 1700 aa6.72□□□□□ -1.33
CDH11-219ENST00000619158 SEMA3EO15041 775 aa6.71□□□□□ -1.33
CDH11-219ENST00000619158 PDE8AO60658 829 aa6.71□□□□□ -1.33
CDH11-219ENST00000619158 MYL6BP14649 208 aa6.71□□□□□ -1.33
CDH11-219ENST00000619158 CTSWP56202 376 aa6.71□□□□□ -1.33
CDH11-219ENST00000619158 TPTE2Q6XPS3 522 aa6.71□□□□□ -1.33
CDH11-219ENST00000619158 SP8Q8IXZ3 490 aa6.71□□□□□ -1.33
CDH11-219ENST00000619158 PTPRFP10586 1907 aa6.71□□□□□ -1.33
CDH11-219ENST00000619158 PDS5AQ29RF7 1337 aaKnown RBP6.71□□□□□ -1.34
CDH11-219ENST00000619158 PI4KAP2A4QPH2 592 aa6.71□□□□□ -1.34
CDH11-219ENST00000619158 DDX58O95786 925 aaKnown RBP6.71□□□□□ -1.34
CDH11-219ENST00000619158 PI4KAP1Q8N8J0 262 aa6.71□□□□□ -1.34
CDH11-219ENST00000619158 TTLL11Q8NHH1 800 aa6.71□□□□□ -1.34
CDH11-219ENST00000619158 PIM2Q9P1W9 311 aa6.71□□□□□ -1.34
CDH11-219ENST00000619158 RFX7Q2KHR2 1363 aa6.71□□□□□ -1.34
CDH11-219ENST00000619158 FZD9O00144 591 aa6.71□□□□□ -1.34
CDH11-219ENST00000619158 GRIN3BO60391 1043 aa6.71□□□□□ -1.34
CDH11-219ENST00000619158 FKBP4Q02790 459 aaKnown RBP eCLIP6.71□□□□□ -1.34
CDH11-219ENST00000619158 CNKSR1Q969H4 720 aa6.71□□□□□ -1.34
CDH11-219ENST00000619158 USP44Q9H0E7 712 aa6.71□□□□□ -1.34
CDH11-219ENST00000619158 COL2A1P02458 1487 aaPredicted RBP6.71□□□□□ -1.34
CDH11-219ENST00000619158 MYH2Q9UKX2 1941 aa6.7□□□□□ -1.34
CDH11-219ENST00000619158 DOCK1Q14185 1865 aa6.7□□□□□ -1.34
CDH11-219ENST00000619158 PRPF40BQ6NWY9 871 aaKnown RBP6.7□□□□□ -1.34
CDH11-219ENST00000619158 C2CD5Q86YS7 1000 aa6.7□□□□□ -1.34
CDH11-219ENST00000619158 ZBTB3Q9H5J0 574 aa6.7□□□□□ -1.34
CDH11-219ENST00000619158 RBBP6Q7Z6E9 1792 aaKnown RBP6.7□□□□□ -1.34
CDH11-219ENST00000619158 CHRNA5P30532 468 aa6.7□□□□□ -1.34
CDH11-219ENST00000619158 FKBP1AP62942 108 aaKnown RBP6.7□□□□□ -1.34
CDH11-219ENST00000619158 BBOX1O75936 387 aa6.69□□□□□ -1.34
CDH11-219ENST00000619158 CIAO1O76071 339 aa6.69□□□□□ -1.34
CDH11-219ENST00000619158 TRIM27P14373 513 aa6.69□□□□□ -1.34
CDH11-219ENST00000619158 CCT4P50991 539 aaKnown RBP6.69□□□□□ -1.34
CDH11-219ENST00000619158 EPHA10Q5JZY3 1008 aa6.69□□□□□ -1.34
CDH11-219ENST00000619158 ERICH6BQ5W0A0 696 aa6.69□□□□□ -1.34
CDH11-219ENST00000619158 ZNF467Q7Z7K2 595 aaPredicted RBP6.69□□□□□ -1.34
CDH11-219ENST00000619158 NBPF5PQ86XG9 351 aaPredicted RBP6.69□□□□□ -1.34
CDH11-219ENST00000619158 ZNF804BA4D1E1 1349 aa6.69□□□□□ -1.34
CDH11-219ENST00000619158 A0A0G2JLW4 131 aa6.69□□□□□ -1.34
CDH11-219ENST00000619158 POTECB2RU33 542 aa6.69□□□□□ -1.34
CDH11-219ENST00000619158 GRM8O00222 908 aa6.69□□□□□ -1.34
CDH11-219ENST00000619158 FGFR2P21802 821 aa6.69□□□□□ -1.34
CDH11-219ENST00000619158 RBM25P49756 843 aaKnown RBP6.69□□□□□ -1.34
CDH11-219ENST00000619158 DALRD3Q5D0E6 543 aaKnown RBP6.69□□□□□ -1.34
CDH11-219ENST00000619158 TTLL6Q8N841 843 aa6.69□□□□□ -1.34
CDH11-219ENST00000619158 RBM17Q96I25 401 aaKnown RBP6.69□□□□□ -1.34
CDH11-219ENST00000619158 MYD88Q99836 296 aa6.69□□□□□ -1.34
CDH11-219ENST00000619158 ALDH1B1P30837 517 aa6.69□□□□□ -1.34
CDH11-219ENST00000619158 CNGB1Q14028 1251 aaPredicted RBP6.69□□□□□ -1.34
CDH11-219ENST00000619158 FAM43BQ6ZT52 329 aaPredicted RBP6.69□□□□□ -1.34
CDH11-219ENST00000619158 CNPY4Q8N129 248 aa6.69□□□□□ -1.34
CDH11-219ENST00000619158 SYNE4Q8N205 404 aa6.69□□□□□ -1.34
CDH11-219ENST00000619158 STK31Q9BXU1 1019 aa6.69□□□□□ -1.34
CDH11-219ENST00000619158 API5Q9BZZ5 524 aaKnown RBP6.69□□□□□ -1.34
CDH11-219ENST00000619158 PRDM10Q9NQV6 1147 aa6.69□□□□□ -1.34
CDH11-219ENST00000619158 BSDC1Q9NW68 430 aaPredicted RBP6.69□□□□□ -1.34
CDH11-219ENST00000619158 PGAP2Q9UHJ9 254 aa6.69□□□□□ -1.34
CDH11-219ENST00000619158 EIF2S2P20042 333 aaKnown RBP6.68□□□□□ -1.34
CDH11-219ENST00000619158 MMP14P50281 582 aa6.68□□□□□ -1.34
CDH11-219ENST00000619158 PDAP1Q13442 181 aaKnown RBP6.68□□□□□ -1.34
CDH11-219ENST00000619158 ATF7IPQ6VMQ6 1270 aa6.68□□□□□ -1.34
CDH11-219ENST00000619158 SLC51AQ86UW1 340 aa6.68□□□□□ -1.34
CDH11-219ENST00000619158 SLC24A3Q9HC58 644 aa6.68□□□□□ -1.34
CDH11-219ENST00000619158 H0YIN7 160 aa6.68□□□□□ -1.34
CDH11-219ENST00000619158 PPEF1O14829 653 aaPredicted RBP6.68□□□□□ -1.34
CDH11-219ENST00000619158 PSEN1P49768 467 aa6.68□□□□□ -1.34
CDH11-219ENST00000619158 MFAP1P55081 439 aaKnown RBP6.68□□□□□ -1.34
CDH11-219ENST00000619158 ZBED3Q96IU2 234 aaPredicted RBP6.68□□□□□ -1.34
CDH11-219ENST00000619158 IRS4O14654 1257 aaPredicted RBP6.68□□□□□ -1.34
CDH11-219ENST00000619158 ZBTB7BO15156 539 aaPredicted RBP6.68□□□□□ -1.34
CDH11-219ENST00000619158 CWF19L2Q2TBE0 894 aaKnown RBP6.68□□□□□ -1.34
CDH11-219ENST00000619158 RTKN2Q8IZC4 609 aa6.68□□□□□ -1.34
CDH11-219ENST00000619158 SECISBP2LQ93073 1101 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms