RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 NSFL1CQ9UNZ2 370 aaKnown RBP10.42□□□□□ -0.74
NEK3-209ENST00000618856 XDHP47989 1333 aa10.41□□□□□ -0.74
NEK3-209ENST00000618856 IRS2Q9Y4H2 1338 aa10.41□□□□□ -0.74
NEK3-209ENST00000618856 ANKRD18BA2A2Z9 1011 aa10.41□□□□□ -0.74
NEK3-209ENST00000618856 AOC3Q16853 763 aa10.41□□□□□ -0.74
NEK3-209ENST00000618856 GPC2Q8N158 579 aa10.41□□□□□ -0.74
NEK3-209ENST00000618856 LARGE2Q8N3Y3 721 aa10.41□□□□□ -0.74
NEK3-209ENST00000618856 ZNRF3Q9ULT6 936 aa10.41□□□□□ -0.74
NEK3-209ENST00000618856 A0A1B0GUL6 1792 aa10.41□□□□□ -0.74
NEK3-209ENST00000618856 PPIP5K2O43314 1243 aa10.4□□□□□ -0.74
NEK3-209ENST00000618856 DDNO94850 711 aaPredicted RBP10.4□□□□□ -0.74
NEK3-209ENST00000618856 IFIT5Q13325 482 aaKnown RBP10.4□□□□□ -0.74
NEK3-209ENST00000618856 WASHC4Q2M389 1173 aa10.4□□□□□ -0.74
NEK3-209ENST00000618856 ZKSCAN2Q63HK3 967 aa10.4□□□□□ -0.74
NEK3-209ENST00000618856 DPY19L2Q6NUT2 758 aa10.4□□□□□ -0.74
NEK3-209ENST00000618856 ZNF526Q8TF50 670 aaPredicted RBP10.4□□□□□ -0.74
NEK3-209ENST00000618856 JDP2Q8WYK2 163 aa10.4□□□□□ -0.74
NEK3-209ENST00000618856 BICC1Q9H694 974 aaKnown RBP10.4□□□□□ -0.74
NEK3-209ENST00000618856 TNNQ9UQP3 1299 aa10.4□□□□□ -0.74
NEK3-209ENST00000618856 SCN4AP35499 1836 aa10.4□□□□□ -0.75
NEK3-209ENST00000618856 WTIPA6NIX2 430 aaPredicted RBP10.39□□□□□ -0.75
NEK3-209ENST00000618856 YDJCA8MPS7 323 aa10.39□□□□□ -0.75
NEK3-209ENST00000618856 VEGFAP15692 232 aaPredicted RBP10.39□□□□□ -0.75
NEK3-209ENST00000618856 ATP2B4P23634 1241 aa10.39□□□□□ -0.75
NEK3-209ENST00000618856 IGHMBP2P38935 993 aaKnown RBP10.39□□□□□ -0.75
NEK3-209ENST00000618856 RFX5P48382 616 aaPredicted RBP10.39□□□□□ -0.75
NEK3-209ENST00000618856 C15orf52Q6ZUT6 534 aaKnown RBP10.39□□□□□ -0.75
NEK3-209ENST00000618856 EYA3Q99504 573 aa10.39□□□□□ -0.75
NEK3-209ENST00000618856 ANKRD2Q9GZV1 360 aa10.39□□□□□ -0.75
NEK3-209ENST00000618856 RRAGCQ9HB90 399 aa10.39□□□□□ -0.75
NEK3-209ENST00000618856 GGA1Q9UJY5 639 aa10.39□□□□□ -0.75
NEK3-209ENST00000618856 LEMD3Q9Y2U8 911 aa10.39□□□□□ -0.75
NEK3-209ENST00000618856 SPEF2Q9C093 1822 aa10.39□□□□□ -0.75
NEK3-209ENST00000618856 ZNF609O15014 1411 aa10.39□□□□□ -0.75
NEK3-209ENST00000618856 MED23Q9ULK4 1368 aa10.39□□□□□ -0.75
NEK3-209ENST00000618856 TOMM70O94826 608 aa10.38□□□□□ -0.75
NEK3-209ENST00000618856 C1QTNF8P60827 252 aa10.38□□□□□ -0.75
NEK3-209ENST00000618856 CXCL9Q07325 125 aa10.38□□□□□ -0.75
NEK3-209ENST00000618856 MTX1Q13505 466 aa10.38□□□□□ -0.75
NEK3-209ENST00000618856 CCDC57Q2TAC2 916 aa10.38□□□□□ -0.75
NEK3-209ENST00000618856 NIM1KQ8IY84 436 aa10.38□□□□□ -0.75
NEK3-209ENST00000618856 MEIS3Q99687 375 aa10.38□□□□□ -0.75
NEK3-209ENST00000618856 RIPOR2Q9Y4F9 1068 aa10.38□□□□□ -0.75
NEK3-209ENST00000618856 ADAMTSL1Q8N6G6 1762 aa10.38□□□□□ -0.75
NEK3-209ENST00000618856 C6orf229H3BNL8 230 aa10.37□□□□□ -0.75
NEK3-209ENST00000618856 UFL1O94874 794 aa10.37□□□□□ -0.75
NEK3-209ENST00000618856 UBTFL1P0CB47 393 aaPredicted RBP10.37□□□□□ -0.75
NEK3-209ENST00000618856 SCNN1DP51172 638 aa10.37□□□□□ -0.75
NEK3-209ENST00000618856 EIF6P56537 245 aaKnown RBP10.37□□□□□ -0.75
NEK3-209ENST00000618856 CHRNDQ07001 517 aa10.37□□□□□ -0.75
NEK3-209ENST00000618856 TMEM57Q8N5G2 664 aa10.37□□□□□ -0.75
NEK3-209ENST00000618856 RBM46Q8TBY0 533 aaKnown RBP10.37□□□□□ -0.75
NEK3-209ENST00000618856 FRAT1Q92837 279 aaPredicted RBP10.37□□□□□ -0.75
NEK3-209ENST00000618856 ZNF594Q96JF6 807 aaPredicted RBP10.37□□□□□ -0.75
NEK3-209ENST00000618856 GPR101Q96P66 508 aaPredicted RBP10.37□□□□□ -0.75
NEK3-209ENST00000618856 MPHOSPH8Q99549 860 aa10.37□□□□□ -0.75
NEK3-209ENST00000618856 ANKIB1Q9P2G1 1089 aa10.37□□□□□ -0.75
NEK3-209ENST00000618856 HDAC5Q9UQL6 1122 aa10.37□□□□□ -0.75
NEK3-209ENST00000618856 ZNF646O15015 1829 aaPredicted RBP10.37□□□□□ -0.75
NEK3-209ENST00000618856 ZNF804BA4D1E1 1349 aa10.36□□□□□ -0.75
NEK3-209ENST00000618856 PSME4Q14997 1843 aa10.36□□□□□ -0.75
NEK3-209ENST00000618856 IQCA1LA6NCM1 817 aa10.36□□□□□ -0.75
NEK3-209ENST00000618856 GNAI3P08754 354 aa10.36□□□□□ -0.75
NEK3-209ENST00000618856 RLBP1P12271 317 aa10.36□□□□□ -0.75
NEK3-209ENST00000618856 PTPN12Q05209 780 aaKnown RBP10.36□□□□□ -0.75
NEK3-209ENST00000618856 LDHAL6AQ6ZMR3 332 aa10.36□□□□□ -0.75
NEK3-209ENST00000618856 PODNQ7Z5L7 613 aa10.36□□□□□ -0.75
NEK3-209ENST00000618856 VGLL2Q8N8G2 317 aa10.36□□□□□ -0.75
NEK3-209ENST00000618856 PUS3Q9BZE2 481 aaKnown RBP10.36□□□□□ -0.75
NEK3-209ENST00000618856 ZC3H12CQ9C0D7 883 aaKnown RBP10.36□□□□□ -0.75
NEK3-209ENST00000618856 TAF1DQ9H5J8 278 aaPredicted RBP10.36□□□□□ -0.75
NEK3-209ENST00000618856 FBXO3Q9UK99 471 aa10.36□□□□□ -0.75
NEK3-209ENST00000618856 SCN9AQ15858 1988 aa10.35□□□□□ -0.75
NEK3-209ENST00000618856 CEP350Q5VT06 3117 aa10.35□□□□□ -0.75
NEK3-209ENST00000618856 RIMBP2O15034 1052 aa10.35□□□□□ -0.75
NEK3-209ENST00000618856 ZBTB7BO15156 539 aaPredicted RBP10.35□□□□□ -0.75
NEK3-209ENST00000618856 ECE2O60344 883 aa10.35□□□□□ -0.75
NEK3-209ENST00000618856 VIL1P09327 827 aaKnown RBP10.35□□□□□ -0.75
NEK3-209ENST00000618856 FSTL1Q12841 308 aa10.35□□□□□ -0.75
NEK3-209ENST00000618856 TNIP1Q15025 636 aa10.35□□□□□ -0.75
NEK3-209ENST00000618856 CIAPIN1Q6FI81 312 aa10.35□□□□□ -0.75
NEK3-209ENST00000618856 TXNRD3Q86VQ6 643 aa10.35□□□□□ -0.75
NEK3-209ENST00000618856 DZIP1LQ8IYY4 767 aaKnown RBP10.35□□□□□ -0.75
NEK3-209ENST00000618856 KCNQ5Q9NR82 932 aa10.35□□□□□ -0.75
NEK3-209ENST00000618856 RCAN3Q9UKA8 241 aa10.35□□□□□ -0.75
NEK3-209ENST00000618856 LRRFIP2Q9Y608 721 aaKnown RBP10.35□□□□□ -0.75
NEK3-209ENST00000618856 MROH5Q6ZUA9 1318 aa10.34□□□□□ -0.75
NEK3-209ENST00000618856 CIAO1O76071 339 aa10.34□□□□□ -0.75
NEK3-209ENST00000618856 KLRK1P26718 216 aa10.34□□□□□ -0.75
NEK3-209ENST00000618856 DOK7Q18PE1 504 aa10.34□□□□□ -0.75
NEK3-209ENST00000618856 LRRC24Q50LG9 513 aa10.34□□□□□ -0.75
NEK3-209ENST00000618856 ATG9AQ7Z3C6 839 aa10.34□□□□□ -0.75
NEK3-209ENST00000618856 DPF2Q92785 391 aa10.34□□□□□ -0.75
NEK3-209ENST00000618856 CLUAP1Q96AJ1 413 aa10.34□□□□□ -0.75
NEK3-209ENST00000618856 GMLQ99445 158 aa10.34□□□□□ -0.75
NEK3-209ENST00000618856 COA1Q9GZY4 146 aa10.34□□□□□ -0.75
NEK3-209ENST00000618856 DBNDD1Q9H9R9 158 aa10.34□□□□□ -0.75
NEK3-209ENST00000618856 COPRSQ9NQ92 184 aa10.34□□□□□ -0.75
NEK3-209ENST00000618856 GPRC5DQ9NZD1 345 aa10.34□□□□□ -0.75
NEK3-209ENST00000618856 HACL1Q9UJ83 578 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms