RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 TBC1D16Q8TBP0 767 aa28.14■■■□□ 2.1
SYNGR3-206ENST00000618464 DBNDD1Q9H9R9 158 aa28.14■■■□□ 2.1
SYNGR3-206ENST00000618464 ANKIB1Q9P2G1 1089 aa28.14■■■□□ 2.1
SYNGR3-206ENST00000618464 FOXN1O15353 648 aa28.13■■■□□ 2.09
SYNGR3-206ENST00000618464 CAPN15O75808 1086 aa28.13■■■□□ 2.09
SYNGR3-206ENST00000618464 GMPSP49915 693 aaPredicted RBP28.13■■■□□ 2.09
SYNGR3-206ENST00000618464 GREM2Q9H772 168 aa28.13■■■□□ 2.09
SYNGR3-206ENST00000618464 GPRC5DQ9NZD1 345 aa28.13■■■□□ 2.09
SYNGR3-206ENST00000618464 MYH3P11055 1940 aa28.13■■■□□ 2.09
SYNGR3-206ENST00000618464 RASSF10A6NK89 507 aa28.12■■■□□ 2.09
SYNGR3-206ENST00000618464 DEFB115Q30KQ5 88 aa28.12■■■□□ 2.09
SYNGR3-206ENST00000618464 CDC5LQ99459 802 aaKnown RBP28.12■■■□□ 2.09
SYNGR3-206ENST00000618464 EYA3Q99504 573 aa28.12■■■□□ 2.09
SYNGR3-206ENST00000618464 UFL1O94874 794 aa28.11■■■□□ 2.09
SYNGR3-206ENST00000618464 TNIP1Q15025 636 aa28.11■■■□□ 2.09
SYNGR3-206ENST00000618464 DOK7Q18PE1 504 aa28.11■■■□□ 2.09
SYNGR3-206ENST00000618464 BCL2L13Q9BXK5 485 aa28.1■■■□□ 2.09
SYNGR3-206ENST00000618464 ADARB2Q9NS39 739 aaKnown RBP28.1■■■□□ 2.09
SYNGR3-206ENST00000618464 PODXL2Q9NZ53 605 aa28.1■■■□□ 2.09
SYNGR3-206ENST00000618464 GGA1Q9UJY5 639 aa28.1■■■□□ 2.09
SYNGR3-206ENST00000618464 ABT1Q9ULW3 272 aaKnown RBP28.1■■■□□ 2.09
SYNGR3-206ENST00000618464 SPEF2Q9C093 1822 aa28.09■■■□□ 2.09
SYNGR3-206ENST00000618464 TRAF5O00463 557 aa28.09■■■□□ 2.09
SYNGR3-206ENST00000618464 CASP7P55210 303 aa28.09■■■□□ 2.09
SYNGR3-206ENST00000618464 ECE2O60344 883 aa28.08■■■□□ 2.09
SYNGR3-206ENST00000618464 BEND3Q5T5X7 828 aa28.07■■■□□ 2.08
SYNGR3-206ENST00000618464 CST9Q5W186 159 aa28.07■■■□□ 2.08
SYNGR3-206ENST00000618464 ZC3H12CQ9C0D7 883 aaKnown RBP28.07■■■□□ 2.08
SYNGR3-206ENST00000618464 RTL9Q8NET4 1388 aa28.07■■■□□ 2.08
SYNGR3-206ENST00000618464 E9PSI1 815 aa28.06■■■□□ 2.08
SYNGR3-206ENST00000618464 CCER2I3L3R5 266 aa28.06■■■□□ 2.08
SYNGR3-206ENST00000618464 PSMD14O00487 310 aa28.06■■■□□ 2.08
SYNGR3-206ENST00000618464 FAM161AQ3B820 660 aa28.06■■■□□ 2.08
SYNGR3-206ENST00000618464 PLA2G12BQ9BX93 195 aa28.06■■■□□ 2.08
SYNGR3-206ENST00000618464 WBP1LQ9NX94 342 aa28.06■■■□□ 2.08
SYNGR3-206ENST00000618464 ZBTB12Q9Y330 459 aaPredicted RBP28.06■■■□□ 2.08
SYNGR3-206ENST00000618464 XDHP47989 1333 aa28.06■■■□□ 2.08
SYNGR3-206ENST00000618464 G3V3G9 751 aa28.05■■■□□ 2.08
SYNGR3-206ENST00000618464 DCAF8Q5TAQ9 597 aa28.05■■■□□ 2.08
SYNGR3-206ENST00000618464 WDR33Q9C0J8 1336 aaKnown RBP28.05■■■□□ 2.08
SYNGR3-206ENST00000618464 KCNQ5Q9NR82 932 aa28.05■■■□□ 2.08
SYNGR3-206ENST00000618464 SHTN1A0MZ66 631 aa28.04■■■□□ 2.08
SYNGR3-206ENST00000618464 SLC4A10Q6U841 1118 aa28.04■■■□□ 2.08
SYNGR3-206ENST00000618464 BSDC1Q9NW68 430 aaPredicted RBP28.04■■■□□ 2.08
SYNGR3-206ENST00000618464 ITGA6P23229 1130 aa28.03■■■□□ 2.08
SYNGR3-206ENST00000618464 HIRAP54198 1017 aaPredicted RBP28.03■■■□□ 2.08
SYNGR3-206ENST00000618464 SLFN5Q08AF3 891 aa28.03■■■□□ 2.08
SYNGR3-206ENST00000618464 AIDAQ96BJ3 306 aa28.03■■■□□ 2.08
SYNGR3-206ENST00000618464 CDCA7LQ96GN5 454 aa28.03■■■□□ 2.08
SYNGR3-206ENST00000618464 MINPP1Q9UNW1 487 aa28.03■■■□□ 2.08
SYNGR3-206ENST00000618464 WTIPA6NIX2 430 aaPredicted RBP28.02■■■□□ 2.08
SYNGR3-206ENST00000618464 ATP2B4P23634 1241 aa28.02■■■□□ 2.08
SYNGR3-206ENST00000618464 IGHMBP2P38935 993 aaKnown RBP28.02■■■□□ 2.08
SYNGR3-206ENST00000618464 CTCFP49711 727 aaPredicted RBP28.02■■■□□ 2.08
SYNGR3-206ENST00000618464 CNOT7Q9UIV1 285 aaKnown RBP28.02■■■□□ 2.08
SYNGR3-206ENST00000618464 MICALL2Q8IY33 904 aa28.01■■■□□ 2.07
SYNGR3-206ENST00000618464 TRPM4Q8TD43 1214 aa28.01■■■□□ 2.07
SYNGR3-206ENST00000618464 PRDM10Q9NQV6 1147 aa28.01■■■□□ 2.07
SYNGR3-206ENST00000618464 PGAP2Q9UHJ9 254 aa28.01■■■□□ 2.07
SYNGR3-206ENST00000618464 TRPM7Q96QT4 1865 aa28.01■■■□□ 2.07
SYNGR3-206ENST00000618464 CSF1RP07333 972 aa28■■■□□ 2.07
SYNGR3-206ENST00000618464 MRPL50Q8N5N7 158 aaKnown RBP28■■■□□ 2.07
SYNGR3-206ENST00000618464 GLIS2Q9BZE0 524 aaPredicted RBP28■■■□□ 2.07
SYNGR3-206ENST00000618464 H7C1D1 291 aa27.99■■■□□ 2.07
SYNGR3-206ENST00000618464 CHMP3Q9Y3E7 222 aa27.99■■■□□ 2.07
SYNGR3-206ENST00000618464 SCN9AQ15858 1988 aa27.99■■■□□ 2.07
SYNGR3-206ENST00000618464 GRM8O00222 908 aa27.98■■■□□ 2.07
SYNGR3-206ENST00000618464 FOXO4P98177 505 aa27.98■■■□□ 2.07
SYNGR3-206ENST00000618464 CYP4F22Q6NT55 531 aa27.98■■■□□ 2.07
SYNGR3-206ENST00000618464 PAXIP1Q6ZW49 1069 aaPredicted RBP27.98■■■□□ 2.07
SYNGR3-206ENST00000618464 CAPNS2Q96L46 248 aa27.98■■■□□ 2.07
SYNGR3-206ENST00000618464 MPHOSPH8Q99549 860 aa27.98■■■□□ 2.07
SYNGR3-206ENST00000618464 C9orf78Q9NZ63 289 aaPredicted RBP27.98■■■□□ 2.07
SYNGR3-206ENST00000618464 TLL2Q9Y6L7 1015 aa27.98■■■□□ 2.07
SYNGR3-206ENST00000618464 CCT4P50991 539 aaKnown RBP27.97■■■□□ 2.07
SYNGR3-206ENST00000618464 LBX1P52954 281 aa27.97■■■□□ 2.07
SYNGR3-206ENST00000618464 GRM1Q13255 1194 aa27.97■■■□□ 2.07
SYNGR3-206ENST00000618464 DPF2Q92785 391 aa27.97■■■□□ 2.07
SYNGR3-206ENST00000618464 SRCIN1Q9C0H9 1055 aa27.97■■■□□ 2.07
SYNGR3-206ENST00000618464 ANKRD18BA2A2Z9 1011 aa27.96■■■□□ 2.07
SYNGR3-206ENST00000618464 MAP2K1Q02750 393 aaPredicted RBP27.96■■■□□ 2.07
SYNGR3-206ENST00000618464 EPHA10Q5JZY3 1008 aa27.96■■■□□ 2.07
SYNGR3-206ENST00000618464 ZC3H15Q8WU90 426 aaKnown RBP27.96■■■□□ 2.07
SYNGR3-206ENST00000618464 SSH1Q8WYL5 1049 aa27.96■■■□□ 2.07
SYNGR3-206ENST00000618464 ALDH1L1O75891 902 aa27.95■■■□□ 2.06
SYNGR3-206ENST00000618464 CELF2O95319 508 aaKnown RBP27.95■■■□□ 2.06
SYNGR3-206ENST00000618464 SAMD7Q7Z3H4 446 aa27.95■■■□□ 2.06
SYNGR3-206ENST00000618464 HSPA8P11142 646 aaKnown RBP27.94■■■□□ 2.06
SYNGR3-206ENST00000618464 RPS12P25398 132 aaKnown RBP27.94■■■□□ 2.06
SYNGR3-206ENST00000618464 ECE1P42892 770 aa27.94■■■□□ 2.06
SYNGR3-206ENST00000618464 IFIT5Q13325 482 aaKnown RBP27.94■■■□□ 2.06
SYNGR3-206ENST00000618464 TBC1D10BQ4KMP7 808 aaPredicted RBP27.94■■■□□ 2.06
SYNGR3-206ENST00000618464 LMBR1LQ6UX01 489 aa27.94■■■□□ 2.06
SYNGR3-206ENST00000618464 MED23Q9ULK4 1368 aa27.94■■■□□ 2.06
SYNGR3-206ENST00000618464 VIL1P09327 827 aaKnown RBP27.93■■■□□ 2.06
SYNGR3-206ENST00000618464 RBM26Q5T8P6 1007 aaKnown RBP27.93■■■□□ 2.06
SYNGR3-206ENST00000618464 SAPCD2Q86UD0 394 aa27.93■■■□□ 2.06
SYNGR3-206ENST00000618464 CDC37L1Q7L3B6 337 aa27.92■■■□□ 2.06
SYNGR3-206ENST00000618464 ANKRD2Q9GZV1 360 aa27.92■■■□□ 2.06
SYNGR3-206ENST00000618464 THSD7BQ9C0I4 1608 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms