RNA–Protein interactions for RNA: ENST00000618361.4

CBWD1-227, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-227ENST00000618361 SF3B3Q15393 1217 aaKnown RBP10.28□□□□□ -0.76
CBWD1-227ENST00000618361 AGBL3Q8NEM8 1001 aa10.28□□□□□ -0.76
CBWD1-227ENST00000618361 POLLQ9UGP5 575 aa10.28□□□□□ -0.76
CBWD1-227ENST00000618361 TRMT112Q9UI30 125 aaKnown RBP10.28□□□□□ -0.76
CBWD1-227ENST00000618361 U3KPZ7 1027 aaPredicted RBP10.28□□□□□ -0.76
CBWD1-227ENST00000618361 AKAP11Q9UKA4 1901 aa10.28□□□□□ -0.76
CBWD1-227ENST00000618361 C6orf229H3BNL8 230 aa10.27□□□□□ -0.77
CBWD1-227ENST00000618361 RIMBP2O15034 1052 aa10.27□□□□□ -0.77
CBWD1-227ENST00000618361 FXR1P51114 621 aaKnown RBP eCLIP10.27□□□□□ -0.77
CBWD1-227ENST00000618361 SCARF1Q14162 830 aa10.27□□□□□ -0.77
CBWD1-227ENST00000618361 ANGEL2Q5VTE6 544 aaKnown RBP10.27□□□□□ -0.77
CBWD1-227ENST00000618361 ZC3H12CQ9C0D7 883 aaKnown RBP10.27□□□□□ -0.77
CBWD1-227ENST00000618361 KCNQ5Q9NR82 932 aa10.27□□□□□ -0.77
CBWD1-227ENST00000618361 PODXL2Q9NZ53 605 aa10.27□□□□□ -0.77
CBWD1-227ENST00000618361 LRRC37AA6NMS7 1700 aa10.27□□□□□ -0.77
CBWD1-227ENST00000618361 ANKRD36CQ5JPF3 1778 aa10.26□□□□□ -0.77
CBWD1-227ENST00000618361 PAPPA2Q9BXP8 1791 aa10.26□□□□□ -0.77
CBWD1-227ENST00000618361 ALDH1A1P00352 501 aa10.26□□□□□ -0.77
CBWD1-227ENST00000618361 GPSM2P81274 684 aa10.26□□□□□ -0.77
CBWD1-227ENST00000618361 DOK7Q18PE1 504 aa10.26□□□□□ -0.77
CBWD1-227ENST00000618361 RSBN1LQ6PCB5 846 aaPredicted RBP10.26□□□□□ -0.77
CBWD1-227ENST00000618361 TBC1D16Q8TBP0 767 aa10.26□□□□□ -0.77
CBWD1-227ENST00000618361 THUMPD2Q9BTF0 503 aaKnown RBP10.26□□□□□ -0.77
CBWD1-227ENST00000618361 BABAM1Q9NWV8 329 aa10.26□□□□□ -0.77
CBWD1-227ENST00000618361 ASTN2O75129 1339 aaPredicted RBP10.26□□□□□ -0.77
CBWD1-227ENST00000618361 KDM3BQ7LBC6 1761 aa10.26□□□□□ -0.77
CBWD1-227ENST00000618361 G3V3G9 751 aa10.25□□□□□ -0.77
CBWD1-227ENST00000618361 DLL1O00548 723 aa10.25□□□□□ -0.77
CBWD1-227ENST00000618361 INHBEP58166 350 aa10.25□□□□□ -0.77
CBWD1-227ENST00000618361 DCAF8Q5TAQ9 597 aa10.25□□□□□ -0.77
CBWD1-227ENST00000618361 COPS6Q7L5N1 327 aa10.25□□□□□ -0.77
CBWD1-227ENST00000618361 CELF1Q92879 486 aaKnown RBP10.25□□□□□ -0.77
CBWD1-227ENST00000618361 MYOZ2Q9NPC6 264 aa10.25□□□□□ -0.77
CBWD1-227ENST00000618361 UBE2Q2LH0YL09 131 aa10.24□□□□□ -0.77
CBWD1-227ENST00000618361 USP17L8P0C7I0 530 aa10.24□□□□□ -0.77
CBWD1-227ENST00000618361 EIF2S2P20042 333 aaKnown RBP10.24□□□□□ -0.77
CBWD1-227ENST00000618361 PPP2R1AP30153 589 aa10.24□□□□□ -0.77
CBWD1-227ENST00000618361 NF2P35240 595 aa10.24□□□□□ -0.77
CBWD1-227ENST00000618361 MMP14P50281 582 aa10.24□□□□□ -0.77
CBWD1-227ENST00000618361 RPS8P62241 208 aaKnown RBP10.24□□□□□ -0.77
CBWD1-227ENST00000618361 NFE2L2Q16236 605 aa10.24□□□□□ -0.77
CBWD1-227ENST00000618361 PLEKHF1Q96S99 279 aa10.24□□□□□ -0.77
CBWD1-227ENST00000618361 GMLQ99445 158 aa10.24□□□□□ -0.77
CBWD1-227ENST00000618361 CNGB1Q14028 1251 aaPredicted RBP10.23□□□□□ -0.77
CBWD1-227ENST00000618361 TTLL12Q14166 644 aaPredicted RBP10.23□□□□□ -0.77
CBWD1-227ENST00000618361 PROSER3Q2NL68 480 aa10.23□□□□□ -0.77
CBWD1-227ENST00000618361 SLC17A8Q8NDX2 589 aa10.23□□□□□ -0.77
CBWD1-227ENST00000618361 XAGE3Q8WTP9 111 aa10.23□□□□□ -0.77
CBWD1-227ENST00000618361 TMEM106CQ9BVX2 250 aa10.23□□□□□ -0.77
CBWD1-227ENST00000618361 PNNQ9H307 717 aaKnown RBP10.23□□□□□ -0.77
CBWD1-227ENST00000618361 TSPYL4Q9UJ04 414 aa10.23□□□□□ -0.77
CBWD1-227ENST00000618361 POTEFA5A3E0 1075 aa10.22□□□□□ -0.77
CBWD1-227ENST00000618361 HSP90B1P14625 803 aaKnown RBP10.22□□□□□ -0.77
CBWD1-227ENST00000618361 AIMP1Q12904 312 aaKnown RBP10.22□□□□□ -0.77
CBWD1-227ENST00000618361 TRIM28Q13263 835 aaKnown RBP10.22□□□□□ -0.77
CBWD1-227ENST00000618361 MOB2Q70IA6 237 aa10.22□□□□□ -0.77
CBWD1-227ENST00000618361 OTOP1Q7RTM1 612 aa10.22□□□□□ -0.77
CBWD1-227ENST00000618361 ARMC9Q7Z3E5 817 aa10.22□□□□□ -0.77
CBWD1-227ENST00000618361 PODNQ7Z5L7 613 aa10.22□□□□□ -0.77
CBWD1-227ENST00000618361 PLBD2Q8NHP8 589 aa10.22□□□□□ -0.77
CBWD1-227ENST00000618361 ARMC5Q96C12 935 aa10.22□□□□□ -0.77
CBWD1-227ENST00000618361 ISCA1Q9BUE6 129 aa10.22□□□□□ -0.77
CBWD1-227ENST00000618361 GGA1Q9UJY5 639 aa10.22□□□□□ -0.77
CBWD1-227ENST00000618361 COLQQ9Y215 455 aaPredicted RBP10.22□□□□□ -0.77
CBWD1-227ENST00000618361 TRIM17Q9Y577 477 aa10.22□□□□□ -0.77
CBWD1-227ENST00000618361 DDX60Q8IY21 1712 aaKnown RBP10.21□□□□□ -0.77
CBWD1-227ENST00000618361 LAMB2P55268 1798 aa10.21□□□□□ -0.77
CBWD1-227ENST00000618361 USP17L3A6NCW0 530 aa10.21□□□□□ -0.77
CBWD1-227ENST00000618361 USP17L4A6NCW7 530 aa10.21□□□□□ -0.77
CBWD1-227ENST00000618361 MANSC4A6NHS7 340 aaPredicted RBP10.21□□□□□ -0.77
CBWD1-227ENST00000618361 UFL1O94874 794 aa10.21□□□□□ -0.77
CBWD1-227ENST00000618361 ANXA1P04083 346 aa10.21□□□□□ -0.77
CBWD1-227ENST00000618361 LDLRAD1Q5T700 205 aa10.21□□□□□ -0.77
CBWD1-227ENST00000618361 USP17L1Q7RTZ2 530 aa10.21□□□□□ -0.77
CBWD1-227ENST00000618361 FAM89AQ96GI7 184 aa10.21□□□□□ -0.77
CBWD1-227ENST00000618361 ERO1AQ96HE7 468 aa10.21□□□□□ -0.77
CBWD1-227ENST00000618361 R3HDMLQ9H3Y0 253 aa10.21□□□□□ -0.77
CBWD1-227ENST00000618361 PTPN22Q9Y2R2 807 aa10.21□□□□□ -0.77
CBWD1-227ENST00000618361 UNCXA6NJT0 531 aa10.2□□□□□ -0.78
CBWD1-227ENST00000618361 POLR2AP24928 1970 aaKnown RBP10.2□□□□□ -0.78
CBWD1-227ENST00000618361 PTPN12Q05209 780 aaKnown RBP10.2□□□□□ -0.78
CBWD1-227ENST00000618361 SPRYD7Q5W111 196 aa10.2□□□□□ -0.78
CBWD1-227ENST00000618361 OGFOD1Q8N543 542 aa10.2□□□□□ -0.78
CBWD1-227ENST00000618361 PCGF6Q9BYE7 350 aa10.2□□□□□ -0.78
CBWD1-227ENST00000618361 SPINK5Q9NQ38 1064 aaPredicted RBP10.2□□□□□ -0.78
CBWD1-227ENST00000618361 ANKIB1Q9P2G1 1089 aa10.2□□□□□ -0.78
CBWD1-227ENST00000618361 MYO3BQ8WXR4 1341 aa10.19□□□□□ -0.78
CBWD1-227ENST00000618361 WNT10BO00744 389 aa10.19□□□□□ -0.78
CBWD1-227ENST00000618361 IRS4O14654 1257 aaPredicted RBP10.19□□□□□ -0.78
CBWD1-227ENST00000618361 ZBTB48P10074 688 aaPredicted RBP10.19□□□□□ -0.78
CBWD1-227ENST00000618361 ATP2B4P23634 1241 aa10.19□□□□□ -0.78
CBWD1-227ENST00000618361 ARHGEF6Q15052 776 aa10.19□□□□□ -0.78
CBWD1-227ENST00000618361 NBPF9Q3BBW0 867 aa10.19□□□□□ -0.78
CBWD1-227ENST00000618361 PRAMEF18Q5VWM3 479 aa10.19□□□□□ -0.78
CBWD1-227ENST00000618361 ANKRD13DQ6ZTN6 518 aa10.19□□□□□ -0.78
CBWD1-227ENST00000618361 NBPF11Q86T75 865 aa10.19□□□□□ -0.78
CBWD1-227ENST00000618361 IFNL1Q8IU54 200 aa10.19□□□□□ -0.78
CBWD1-227ENST00000618361 XDHP47989 1333 aa10.18□□□□□ -0.78
CBWD1-227ENST00000618361 MAPK8IP3Q9UPT6 1336 aa10.18□□□□□ -0.78
CBWD1-227ENST00000618361 EN2P19622 333 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms