RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 MPHOSPH10O00566 681 aaKnown RBP16.24■□□□□ 0.19
CIITA-213ENST00000618327 CYP27B1O15528 508 aa16.24■□□□□ 0.19
CIITA-213ENST00000618327 GJB2P29033 226 aa16.24■□□□□ 0.19
CIITA-213ENST00000618327 NAA16Q6N069 864 aaPredicted RBP16.24■□□□□ 0.19
CIITA-213ENST00000618327 TNMDQ9H2S6 317 aa16.24■□□□□ 0.19
CIITA-213ENST00000618327 RICTORQ6R327 1708 aa16.24■□□□□ 0.19
CIITA-213ENST00000618327 CCDC82Q8N4S0 544 aa16.24■□□□□ 0.19
CIITA-213ENST00000618327 CCDC43Q96MW1 224 aaKnown RBP16.24■□□□□ 0.19
CIITA-213ENST00000618327 SLC4A4Q9Y6R1 1079 aa16.24■□□□□ 0.19
CIITA-213ENST00000618327 PPLO60437 1756 aa16.24■□□□□ 0.19
CIITA-213ENST00000618327 RIMS1Q86UR5 1692 aaKnown RBP16.24■□□□□ 0.19
CIITA-213ENST00000618327 GSTO1P78417 241 aa16.24■□□□□ 0.19
CIITA-213ENST00000618327 SETD1BQ9UPS6 1966 aaKnown RBP16.23■□□□□ 0.19
CIITA-213ENST00000618327 LOC102724428A0A0B4J2F2 783 aa16.23■□□□□ 0.19
CIITA-213ENST00000618327 SIK1P57059 783 aa16.23■□□□□ 0.19
CIITA-213ENST00000618327 LRRC7Q96NW7 1537 aa16.23■□□□□ 0.19
CIITA-213ENST00000618327 MYO3AQ8NEV4 1616 aa16.23■□□□□ 0.19
CIITA-213ENST00000618327 PDE4BQ07343 736 aa16.23■□□□□ 0.19
CIITA-213ENST00000618327 PUM3Q15397 648 aaKnown RBP16.23■□□□□ 0.19
CIITA-213ENST00000618327 ZNF804AQ7Z570 1209 aa16.23■□□□□ 0.19
CIITA-213ENST00000618327 XAGE2Q96GT9 111 aa16.23■□□□□ 0.19
CIITA-213ENST00000618327 PARP3Q9Y6F1 533 aa16.23■□□□□ 0.19
CIITA-213ENST00000618327 CPS1P31327 1500 aa16.23■□□□□ 0.19
CIITA-213ENST00000618327 OVOS2A0A0J9YW53 1432 aa16.22■□□□□ 0.19
CIITA-213ENST00000618327 OVOS2Q6IE36 1432 aa16.22■□□□□ 0.19
CIITA-213ENST00000618327 STX6O43752 255 aa16.22■□□□□ 0.19
CIITA-213ENST00000618327 CCDC192P0DO97 292 aa16.22■□□□□ 0.19
CIITA-213ENST00000618327 GUCY1B3Q02153 619 aa16.22■□□□□ 0.19
CIITA-213ENST00000618327 SCAND2PQ9GZW5 306 aaPredicted RBP16.22■□□□□ 0.19
CIITA-213ENST00000618327 DIP2AQ14689 1571 aa16.22■□□□□ 0.19
CIITA-213ENST00000618327 NCAPD2Q15021 1401 aa16.22■□□□□ 0.19
CIITA-213ENST00000618327 CREB3L3Q68CJ9 461 aa16.22■□□□□ 0.19
CIITA-213ENST00000618327 CATIPQ7Z7H3 387 aa16.22■□□□□ 0.19
CIITA-213ENST00000618327 LRRC2Q9BYS8 371 aa16.22■□□□□ 0.19
CIITA-213ENST00000618327 CCDC171Q6TFL3 1326 aa16.22■□□□□ 0.19
CIITA-213ENST00000618327 MICU3Q86XE3 530 aa16.21■□□□□ 0.19
CIITA-213ENST00000618327 NECAB1Q8N987 351 aa16.21■□□□□ 0.19
CIITA-213ENST00000618327 CDK5RAP3Q96JB5 506 aa16.21■□□□□ 0.19
CIITA-213ENST00000618327 TSPY2A6NKD2 308 aa16.21■□□□□ 0.18
CIITA-213ENST00000618327 MAGEB6Q8N7X4 407 aa16.21■□□□□ 0.18
CIITA-213ENST00000618327 PCMTD1Q96MG8 357 aaPredicted RBP16.21■□□□□ 0.18
CIITA-213ENST00000618327 POLR1AO95602 1720 aaPredicted RBP16.21■□□□□ 0.18
CIITA-213ENST00000618327 MAP3K15Q6ZN16 1313 aa16.2■□□□□ 0.18
CIITA-213ENST00000618327 TRPC5Q9UL62 973 aaPredicted RBP16.2■□□□□ 0.18
CIITA-213ENST00000618327 HEG1Q9ULI3 1381 aa16.2■□□□□ 0.18
CIITA-213ENST00000618327 SSRP1Q08945 709 aaKnown RBP16.2■□□□□ 0.18
CIITA-213ENST00000618327 TEX35Q5T0J7 233 aa16.2■□□□□ 0.18
CIITA-213ENST00000618327 ZBTB38Q8NAP3 1195 aaPredicted RBP16.2■□□□□ 0.18
CIITA-213ENST00000618327 KRT23Q9C075 422 aa16.2■□□□□ 0.18
CIITA-213ENST00000618327 RBM25P49756 843 aaKnown RBP16.2■□□□□ 0.18
CIITA-213ENST00000618327 NUP62CLQ9H1M0 184 aa16.2■□□□□ 0.18
CIITA-213ENST00000618327 HELLSQ9NRZ9 838 aa16.2■□□□□ 0.18
CIITA-213ENST00000618327 PCCAP05165 728 aaPredicted RBP16.19■□□□□ 0.18
CIITA-213ENST00000618327 IARSP41252 1262 aaKnown RBP16.19■□□□□ 0.18
CIITA-213ENST00000618327 METAP2P50579 478 aaKnown RBP eCLIP16.19■□□□□ 0.18
CIITA-213ENST00000618327 PDE4CQ08493 712 aa16.19■□□□□ 0.18
CIITA-213ENST00000618327 ZC3H12CQ9C0D7 883 aaKnown RBP16.19■□□□□ 0.18
CIITA-213ENST00000618327 IBTKQ9P2D0 1353 aaPredicted RBP16.19■□□□□ 0.18
CIITA-213ENST00000618327 KLF18A0A0U1RQI7 1052 aa16.19■□□□□ 0.18
CIITA-213ENST00000618327 RAB11FIP4Q86YS3 637 aa16.19■□□□□ 0.18
CIITA-213ENST00000618327 CCDC144CPQ8IYA2 1237 aa16.19■□□□□ 0.18
CIITA-213ENST00000618327 PIGBQ92521 554 aa16.19■□□□□ 0.18
CIITA-213ENST00000618327 CNNM2Q9H8M5 875 aa16.19■□□□□ 0.18
CIITA-213ENST00000618327 ORC3Q9UBD5 711 aaPredicted RBP16.19■□□□□ 0.18
CIITA-213ENST00000618327 ZBTB1Q9Y2K1 713 aa16.19■□□□□ 0.18
CIITA-213ENST00000618327 SLC4A8Q2Y0W8 1093 aa16.19■□□□□ 0.18
CIITA-213ENST00000618327 Q6ZUG5 572 aa16.19■□□□□ 0.18
CIITA-213ENST00000618327 MAP7D2Q96T17 732 aa16.19■□□□□ 0.18
CIITA-213ENST00000618327 TRIM5Q9C035 493 aa16.19■□□□□ 0.18
CIITA-213ENST00000618327 MAGEB6P1A0A0J9YX57 407 aa16.19■□□□□ 0.18
CIITA-213ENST00000618327 CTSWP56202 376 aa16.19■□□□□ 0.18
CIITA-213ENST00000618327 SGSM2O43147 1006 aa16.18■□□□□ 0.18
CIITA-213ENST00000618327 GNAT2P19087 354 aa16.18■□□□□ 0.18
CIITA-213ENST00000618327 IL6STP40189 918 aaPredicted RBP16.18■□□□□ 0.18
CIITA-213ENST00000618327 UNC5CLQ8IV45 518 aa16.18■□□□□ 0.18
CIITA-213ENST00000618327 LPIN2Q92539 896 aa16.18■□□□□ 0.18
CIITA-213ENST00000618327 SEC63Q9UGP8 760 aaKnown RBP16.18■□□□□ 0.18
CIITA-213ENST00000618327 THRAP3Q9Y2W1 955 aaKnown RBP16.18■□□□□ 0.18
CIITA-213ENST00000618327 CRKLP46109 303 aaKnown RBP16.18■□□□□ 0.18
CIITA-213ENST00000618327 MIGA1Q8NAN2 632 aa16.18■□□□□ 0.18
CIITA-213ENST00000618327 CEP89Q96ST8 783 aa16.18■□□□□ 0.18
CIITA-213ENST00000618327 ESR2Q92731 530 aa16.18■□□□□ 0.18
CIITA-213ENST00000618327 RBM17Q96I25 401 aaKnown RBP16.18■□□□□ 0.18
CIITA-213ENST00000618327 TAF5LO75529 589 aa16.18■□□□□ 0.18
CIITA-213ENST00000618327 GIGYF2Q6Y7W6 1299 aaKnown RBP16.18■□□□□ 0.18
CIITA-213ENST00000618327 KBTBD3Q8NAB2 608 aa16.18■□□□□ 0.18
CIITA-213ENST00000618327 QTRT2Q9H974 415 aaKnown RBP16.18■□□□□ 0.18
CIITA-213ENST00000618327 PPFIA3O75145 1194 aa16.17■□□□□ 0.18
CIITA-213ENST00000618327 BAG4O95429 457 aaKnown RBP16.17■□□□□ 0.18
CIITA-213ENST00000618327 WTAPQ15007 396 aa16.17■□□□□ 0.18
CIITA-213ENST00000618327 EAF2Q96CJ1 260 aaPredicted RBP16.17■□□□□ 0.18
CIITA-213ENST00000618327 GSPT1P15170 499 aaKnown RBP16.17■□□□□ 0.18
CIITA-213ENST00000618327 AK2P54819 239 aa16.17■□□□□ 0.18
CIITA-213ENST00000618327 MTERF4Q7Z6M4 381 aaKnown RBP16.17■□□□□ 0.18
CIITA-213ENST00000618327 FAM227BQ96M60 508 aa16.17■□□□□ 0.18
CIITA-213ENST00000618327 DENND2AQ9ULE3 1009 aa16.17■□□□□ 0.18
CIITA-213ENST00000618327 CEP131Q9UPN4 1083 aa16.17■□□□□ 0.18
CIITA-213ENST00000618327 CCDC24Q8N4L8 307 aa16.17■□□□□ 0.18
CIITA-213ENST00000618327 MROH5Q6ZUA9 1318 aa16.17■□□□□ 0.18
CIITA-213ENST00000618327 HOMER1Q86YM7 354 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms