RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 GADD45BO75293 160 aaPredicted RBP14.82□□□□□ -0.04
CIITA-212ENST00000618207 ST3GAL1Q11201 340 aa14.82□□□□□ -0.04
CIITA-212ENST00000618207 SCARF1Q14162 830 aa14.82□□□□□ -0.04
CIITA-212ENST00000618207 METTL24Q5JXM2 366 aa14.82□□□□□ -0.04
CIITA-212ENST00000618207 TTC39AQ5SRH9 613 aa14.82□□□□□ -0.04
CIITA-212ENST00000618207 CNNM1Q9NRU3 951 aa14.82□□□□□ -0.04
CIITA-212ENST00000618207 RPAP1Q9BWH6 1393 aaPredicted RBP14.82□□□□□ -0.04
CIITA-212ENST00000618207 WDR33Q9C0J8 1336 aaKnown RBP14.81□□□□□ -0.04
CIITA-212ENST00000618207 PAPPAQ13219 1627 aa14.81□□□□□ -0.04
CIITA-212ENST00000618207 STX6O43752 255 aa14.81□□□□□ -0.04
CIITA-212ENST00000618207 PSMA5P28066 241 aa14.81□□□□□ -0.04
CIITA-212ENST00000618207 ZSCAN23Q3MJ62 389 aa14.81□□□□□ -0.04
CIITA-212ENST00000618207 FERMT3Q86UX7 667 aa14.81□□□□□ -0.04
CIITA-212ENST00000618207 NAP1L2Q9ULW6 460 aaPredicted RBP14.81□□□□□ -0.04
CIITA-212ENST00000618207 CNPY2Q9Y2B0 182 aa14.81□□□□□ -0.04
CIITA-212ENST00000618207 A0A0U1RQG5 324 aaPredicted RBP14.81□□□□□ -0.04
CIITA-212ENST00000618207 SNAP23O00161 211 aa14.81□□□□□ -0.04
CIITA-212ENST00000618207 KCNQ2O43526 872 aa14.81□□□□□ -0.04
CIITA-212ENST00000618207 CYP21A2P08686 494 aa14.81□□□□□ -0.04
CIITA-212ENST00000618207 HCLS1P14317 486 aaPredicted RBP14.81□□□□□ -0.04
CIITA-212ENST00000618207 WASHC4Q2M389 1173 aa14.81□□□□□ -0.04
CIITA-212ENST00000618207 SMIM5Q71RC9 77 aa14.81□□□□□ -0.04
CIITA-212ENST00000618207 TMEM63CQ9P1W3 806 aa14.81□□□□□ -0.04
CIITA-212ENST00000618207 FIBPO43427 364 aa14.8□□□□□ -0.04
CIITA-212ENST00000618207 CHST3Q7LGC8 479 aa14.8□□□□□ -0.04
CIITA-212ENST00000618207 SYCE3A1L190 88 aa14.8□□□□□ -0.04
CIITA-212ENST00000618207 HSP90B1P14625 803 aaKnown RBP14.8□□□□□ -0.04
CIITA-212ENST00000618207 CCDC158Q5M9N0 1113 aa14.8□□□□□ -0.04
CIITA-212ENST00000618207 TTLL11Q8NHH1 800 aa14.8□□□□□ -0.04
CIITA-212ENST00000618207 TM6SF1Q9BZW5 370 aa14.8□□□□□ -0.04
CIITA-212ENST00000618207 RPS6KB1P23443 525 aa14.79□□□□□ -0.04
CIITA-212ENST00000618207 USP48Q86UV5 1035 aa14.79□□□□□ -0.04
CIITA-212ENST00000618207 MARCH10Q8NA82 808 aaPredicted RBP14.79□□□□□ -0.04
CIITA-212ENST00000618207 DISP2A7MBM2 1401 aa14.79□□□□□ -0.04
CIITA-212ENST00000618207 FOSBP53539 338 aa14.79□□□□□ -0.04
CIITA-212ENST00000618207 FAM173BQ6P4H8 233 aa14.79□□□□□ -0.04
CIITA-212ENST00000618207 KCNB2Q92953 911 aa14.79□□□□□ -0.04
CIITA-212ENST00000618207 UBN2Q6ZU65 1347 aa14.79□□□□□ -0.04
CIITA-212ENST00000618207 ZSCAN22P10073 491 aaPredicted RBP14.79□□□□□ -0.04
CIITA-212ENST00000618207 ZAP70P43403 619 aa14.79□□□□□ -0.04
CIITA-212ENST00000618207 TOB2Q14106 344 aaPredicted RBP14.79□□□□□ -0.04
CIITA-212ENST00000618207 TTLL5Q6EMB2 1281 aa14.79□□□□□ -0.04
CIITA-212ENST00000618207 NEK1Q96PY6 1258 aa14.79□□□□□ -0.04
CIITA-212ENST00000618207 HAND2P61296 217 aa14.78□□□□□ -0.04
CIITA-212ENST00000618207 TRIM28Q13263 835 aaKnown RBP14.78□□□□□ -0.04
CIITA-212ENST00000618207 KLHL34Q8N239 644 aa14.78□□□□□ -0.04
CIITA-212ENST00000618207 SPATA31A1Q5TZJ5 1347 aa14.78□□□□□ -0.04
CIITA-212ENST00000618207 CIAO1O76071 339 aa14.78□□□□□ -0.04
CIITA-212ENST00000618207 CRKLP46109 303 aaKnown RBP14.78□□□□□ -0.04
CIITA-212ENST00000618207 CTSWP56202 376 aa14.78□□□□□ -0.04
CIITA-212ENST00000618207 ATP2B3Q16720 1220 aa14.78□□□□□ -0.04
CIITA-212ENST00000618207 FAM98CQ17RN3 349 aaKnown RBP14.78□□□□□ -0.04
CIITA-212ENST00000618207 Q6ZUG5 572 aa14.78□□□□□ -0.04
CIITA-212ENST00000618207 COL14A1Q05707 1796 aaKnown RBP14.77□□□□□ -0.04
CIITA-212ENST00000618207 ANKRD18BA2A2Z9 1011 aa14.77□□□□□ -0.04
CIITA-212ENST00000618207 M0R2C6 588 aa14.77□□□□□ -0.04
CIITA-212ENST00000618207 LARP1BQ659C4 914 aaKnown RBP14.77□□□□□ -0.04
CIITA-212ENST00000618207 STOX1Q6ZVD7 989 aa14.77□□□□□ -0.04
CIITA-212ENST00000618207 OSBP2Q969R2 916 aa14.77□□□□□ -0.04
CIITA-212ENST00000618207 ZSCAN31Q96LW9 406 aaPredicted RBP14.77□□□□□ -0.04
CIITA-212ENST00000618207 DNM1Q05193 864 aaKnown RBP14.77□□□□□ -0.05
CIITA-212ENST00000618207 FAM182BQ5T319 152 aa14.77□□□□□ -0.05
CIITA-212ENST00000618207 BRF1Q92994 677 aa14.77□□□□□ -0.05
CIITA-212ENST00000618207 DDX11Q96FC9 970 aa14.77□□□□□ -0.05
CIITA-212ENST00000618207 C8orf37Q96NL8 207 aa14.77□□□□□ -0.05
CIITA-212ENST00000618207 SH2B1Q9NRF2 756 aaPredicted RBP14.77□□□□□ -0.05
CIITA-212ENST00000618207 COL16A1Q07092 1604 aaPredicted RBP14.77□□□□□ -0.05
CIITA-212ENST00000618207 MAST3O60307 1309 aa14.77□□□□□ -0.05
CIITA-212ENST00000618207 LOC102724428A0A0B4J2F2 783 aa14.76□□□□□ -0.05
CIITA-212ENST00000618207 F13A1P00488 732 aa14.76□□□□□ -0.05
CIITA-212ENST00000618207 CSF1RP07333 972 aa14.76□□□□□ -0.05
CIITA-212ENST00000618207 SIK1P57059 783 aa14.76□□□□□ -0.05
CIITA-212ENST00000618207 RNF214Q8ND24 703 aa14.76□□□□□ -0.05
CIITA-212ENST00000618207 GPR108Q9NPR9 543 aa14.76□□□□□ -0.05
CIITA-212ENST00000618207 TAOK2Q9UL54 1235 aa14.76□□□□□ -0.05
CIITA-212ENST00000618207 AKAP2Q9Y2D5 859 aa14.76□□□□□ -0.05
CIITA-212ENST00000618207 U3KPZ7 1027 aaPredicted RBP14.76□□□□□ -0.05
CIITA-212ENST00000618207 RNF113AO15541 343 aaKnown RBP14.76□□□□□ -0.05
CIITA-212ENST00000618207 HSPD1P10809 573 aaKnown RBP14.76□□□□□ -0.05
CIITA-212ENST00000618207 NASPP49321 788 aaPredicted RBP14.76□□□□□ -0.05
CIITA-212ENST00000618207 ITPK1Q13572 414 aa14.76□□□□□ -0.05
CIITA-212ENST00000618207 HMG20BQ9P0W2 317 aa14.76□□□□□ -0.05
CIITA-212ENST00000618207 JAK2O60674 1132 aa14.75□□□□□ -0.05
CIITA-212ENST00000618207 SUSD4Q5VX71 490 aa14.75□□□□□ -0.05
CIITA-212ENST00000618207 SEC31BQ9NQW1 1179 aa14.75□□□□□ -0.05
CIITA-212ENST00000618207 IL6STP40189 918 aaPredicted RBP14.75□□□□□ -0.05
CIITA-212ENST00000618207 RBM10P98175 930 aaKnown RBP14.75□□□□□ -0.05
CIITA-212ENST00000618207 ZMYM1Q5SVZ6 1142 aa14.75□□□□□ -0.05
CIITA-212ENST00000618207 MTMR6Q9Y217 621 aa14.75□□□□□ -0.05
CIITA-212ENST00000618207 RIPOR2Q9Y4F9 1068 aa14.75□□□□□ -0.05
CIITA-212ENST00000618207 USPL1Q5W0Q7 1092 aa14.74□□□□□ -0.05
CIITA-212ENST00000618207 BICDL1Q6ZP65 573 aa14.74□□□□□ -0.05
CIITA-212ENST00000618207 CDC37L1Q7L3B6 337 aa14.74□□□□□ -0.05
CIITA-212ENST00000618207 CCDC87Q9NVE4 849 aa14.74□□□□□ -0.05
CIITA-212ENST00000618207 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.74□□□□□ -0.05
CIITA-212ENST00000618207 DOT1LQ8TEK3 1739 aa14.74□□□□□ -0.05
CIITA-212ENST00000618207 IDH1O75874 414 aaKnown RBP14.74□□□□□ -0.05
CIITA-212ENST00000618207 MCAMP43121 646 aa14.74□□□□□ -0.05
CIITA-212ENST00000618207 CCT2P78371 535 aaKnown RBP14.74□□□□□ -0.05
CIITA-212ENST00000618207 INTS5Q6P9B9 1019 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms