RNA–Protein interactions for RNA: ENST00000616821.4

HIP1-207, Transcript of huntingtin interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene HIP1, Length 3,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIP1-207ENST00000616821 CCDC144CPQ8IYA2 1237 aa11.81□□□□□ -0.52
HIP1-207ENST00000616821 SPATA32Q96LK8 384 aa11.81□□□□□ -0.52
HIP1-207ENST00000616821 NPHP3Q7Z494 1330 aa11.81□□□□□ -0.52
HIP1-207ENST00000616821 SPTY2D1Q68D10 685 aaPredicted RBP11.81□□□□□ -0.52
HIP1-207ENST00000616821 DNAJC25Q9H1X3 360 aa11.81□□□□□ -0.52
HIP1-207ENST00000616821 TFIP11Q9UBB9 837 aaKnown RBP11.81□□□□□ -0.52
HIP1-207ENST00000616821 ZKSCAN1P17029 563 aaPredicted RBP11.8□□□□□ -0.52
HIP1-207ENST00000616821 CDC25BP30305 580 aa11.8□□□□□ -0.52
HIP1-207ENST00000616821 MYBPC2Q14324 1141 aa11.8□□□□□ -0.52
HIP1-207ENST00000616821 ZSCAN26Q16670 478 aa11.8□□□□□ -0.52
HIP1-207ENST00000616821 KMT5BQ4FZB7 885 aa11.8□□□□□ -0.52
HIP1-207ENST00000616821 DDX54Q8TDD1 881 aaKnown RBP11.8□□□□□ -0.52
HIP1-207ENST00000616821 KCNB2Q92953 911 aa11.8□□□□□ -0.52
HIP1-207ENST00000616821 TPCN1Q9ULQ1 816 aa11.8□□□□□ -0.52
HIP1-207ENST00000616821 SRGAP3O43295 1099 aa11.8□□□□□ -0.52
HIP1-207ENST00000616821 GLRX3O76003 335 aaKnown RBP11.8□□□□□ -0.52
HIP1-207ENST00000616821 PTPN14Q15678 1187 aa11.8□□□□□ -0.52
HIP1-207ENST00000616821 ZNF215Q9UL58 517 aaPredicted RBP11.8□□□□□ -0.52
HIP1-207ENST00000616821 MAP3K19Q56UN5 1328 aa11.8□□□□□ -0.52
HIP1-207ENST00000616821 NEMFO60524 1076 aa11.8□□□□□ -0.52
HIP1-207ENST00000616821 SF3A1Q15459 793 aaKnown RBP11.8□□□□□ -0.52
HIP1-207ENST00000616821 LRRC8AQ8IWT6 810 aa11.8□□□□□ -0.52
HIP1-207ENST00000616821 LEO1Q8WVC0 666 aaPredicted RBP11.8□□□□□ -0.52
HIP1-207ENST00000616821 TTC21BQ7Z4L5 1316 aa11.79□□□□□ -0.52
HIP1-207ENST00000616821 GOLGA6CA6NDK9 693 aa11.79□□□□□ -0.52
HIP1-207ENST00000616821 GOLGA6BA6NDN3 693 aa11.79□□□□□ -0.52
HIP1-207ENST00000616821 CAVIN2O95810 425 aa11.79□□□□□ -0.52
HIP1-207ENST00000616821 GOLGA6DP0CG33 693 aa11.79□□□□□ -0.52
HIP1-207ENST00000616821 TXNDC2Q86VQ3 553 aa11.79□□□□□ -0.52
HIP1-207ENST00000616821 TXLNBQ8N3L3 684 aa11.79□□□□□ -0.52
HIP1-207ENST00000616821 IRAK4Q9NWZ3 460 aa11.79□□□□□ -0.52
HIP1-207ENST00000616821 GOLGA6AQ9NYA3 693 aa11.79□□□□□ -0.52
HIP1-207ENST00000616821 MAP3K5Q99683 1374 aa11.79□□□□□ -0.52
HIP1-207ENST00000616821 GOLGA6L19H0YKK7 550 aa11.79□□□□□ -0.52
HIP1-207ENST00000616821 BICD2Q8TD16 824 aa11.79□□□□□ -0.52
HIP1-207ENST00000616821 TTC41PQ6P2S7 1318 aa11.79□□□□□ -0.52
HIP1-207ENST00000616821 MON2Q7Z3U7 1717 aa11.79□□□□□ -0.52
HIP1-207ENST00000616821 CAND2O75155 1236 aa11.78□□□□□ -0.52
HIP1-207ENST00000616821 NR1I2O75469 434 aa11.78□□□□□ -0.52
HIP1-207ENST00000616821 RBM6P78332 1123 aaKnown RBP11.78□□□□□ -0.52
HIP1-207ENST00000616821 NECTIN1Q15223 517 aa11.78□□□□□ -0.52
HIP1-207ENST00000616821 DDX46Q7L014 1031 aaKnown RBP11.78□□□□□ -0.52
HIP1-207ENST00000616821 ERO1AQ96HE7 468 aa11.78□□□□□ -0.52
HIP1-207ENST00000616821 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.78□□□□□ -0.52
HIP1-207ENST00000616821 V9GYY5 206 aaPredicted RBP11.78□□□□□ -0.52
HIP1-207ENST00000616821 C3P01024 1663 aa11.78□□□□□ -0.52
HIP1-207ENST00000616821 XRN1Q8IZH2 1706 aaKnown RBP11.78□□□□□ -0.52
HIP1-207ENST00000616821 USP27XA6NNY8 438 aa11.78□□□□□ -0.52
HIP1-207ENST00000616821 IRX1P78414 480 aaPredicted RBP11.78□□□□□ -0.52
HIP1-207ENST00000616821 MCTP2Q6DN12 878 aa11.78□□□□□ -0.52
HIP1-207ENST00000616821 FAM53CQ9NYF3 392 aa11.78□□□□□ -0.52
HIP1-207ENST00000616821 USP42Q9H9J4 1324 aaKnown RBP11.78□□□□□ -0.52
HIP1-207ENST00000616821 CCP110O43303 1012 aa11.77□□□□□ -0.52
HIP1-207ENST00000616821 SETSIPP0DME0 302 aa11.77□□□□□ -0.52
HIP1-207ENST00000616821 SKILP12757 684 aa11.77□□□□□ -0.52
HIP1-207ENST00000616821 NYAP1Q6ZVC0 841 aa11.77□□□□□ -0.52
HIP1-207ENST00000616821 KLHL23Q8NBE8 558 aa11.77□□□□□ -0.52
HIP1-207ENST00000616821 PXDNLA1KZ92 1463 aa11.77□□□□□ -0.52
HIP1-207ENST00000616821 PSMA5P28066 241 aa11.77□□□□□ -0.53
HIP1-207ENST00000616821 ARID5BQ14865 1188 aa11.77□□□□□ -0.53
HIP1-207ENST00000616821 CREB3L3Q68CJ9 461 aa11.77□□□□□ -0.53
HIP1-207ENST00000616821 SARM1Q6SZW1 724 aa11.77□□□□□ -0.53
HIP1-207ENST00000616821 SYT10Q6XYQ8 523 aa11.77□□□□□ -0.53
HIP1-207ENST00000616821 MRFAP1L1Q96HT8 127 aa11.77□□□□□ -0.53
HIP1-207ENST00000616821 RBM8AQ9Y5S9 174 aaKnown RBP11.77□□□□□ -0.53
HIP1-207ENST00000616821 FBXO38Q6PIJ6 1188 aa11.77□□□□□ -0.53
HIP1-207ENST00000616821 LARP1Q6PKG0 1096 aaKnown RBP11.77□□□□□ -0.53
HIP1-207ENST00000616821 ABCD1P33897 745 aa11.76□□□□□ -0.53
HIP1-207ENST00000616821 ELF2Q15723 593 aa11.76□□□□□ -0.53
HIP1-207ENST00000616821 SLFNL1Q499Z3 407 aa11.76□□□□□ -0.53
HIP1-207ENST00000616821 TEX35Q5T0J7 233 aa11.76□□□□□ -0.53
HIP1-207ENST00000616821 PROCA1Q8NCQ7 364 aaPredicted RBP11.76□□□□□ -0.53
HIP1-207ENST00000616821 PGBD1Q96JS3 809 aa11.76□□□□□ -0.53
HIP1-207ENST00000616821 HTATSF1O43719 755 aaKnown RBP11.76□□□□□ -0.53
HIP1-207ENST00000616821 SLU7O95391 586 aaKnown RBP11.76□□□□□ -0.53
HIP1-207ENST00000616821 IQCB1Q15051 598 aa11.76□□□□□ -0.53
HIP1-207ENST00000616821 ANKRD1Q15327 319 aa11.76□□□□□ -0.53
HIP1-207ENST00000616821 E2F4Q16254 413 aa11.76□□□□□ -0.53
HIP1-207ENST00000616821 SUGP1Q8IWZ8 645 aaKnown RBP11.76□□□□□ -0.53
HIP1-207ENST00000616821 NUB1Q9Y5A7 615 aa11.76□□□□□ -0.53
HIP1-207ENST00000616821 PRR36Q9H6K5 1346 aa11.76□□□□□ -0.53
HIP1-207ENST00000616821 AGLP35573 1532 aa11.75□□□□□ -0.53
HIP1-207ENST00000616821 TRIM66O15016 1216 aa11.75□□□□□ -0.53
HIP1-207ENST00000616821 AP1ARQ63HQ0 302 aa11.75□□□□□ -0.53
HIP1-207ENST00000616821 CLASRPQ8N2M8 674 aaKnown RBP11.75□□□□□ -0.53
HIP1-207ENST00000616821 PHAXQ9H814 394 aaKnown RBP11.75□□□□□ -0.53
HIP1-207ENST00000616821 ECHDC1Q9NTX5 307 aa11.75□□□□□ -0.53
HIP1-207ENST00000616821 TRMT1Q9NXH9 659 aaKnown RBP11.75□□□□□ -0.53
HIP1-207ENST00000616821 ADGRL3Q9HAR2 1447 aa11.75□□□□□ -0.53
HIP1-207ENST00000616821 ANKRD33BA6NCL7 494 aa11.75□□□□□ -0.53
HIP1-207ENST00000616821 CCDC69A6NI79 296 aa11.75□□□□□ -0.53
HIP1-207ENST00000616821 RNF20Q5VTR2 975 aa11.75□□□□□ -0.53
HIP1-207ENST00000616821 CEP89Q96ST8 783 aa11.75□□□□□ -0.53
HIP1-207ENST00000616821 RGPD1P0DJD0 1748 aa11.75□□□□□ -0.53
HIP1-207ENST00000616821 OVOS2A0A0J9YW53 1432 aa11.75□□□□□ -0.53
HIP1-207ENST00000616821 OVOS2Q6IE36 1432 aa11.75□□□□□ -0.53
HIP1-207ENST00000616821 NBPF7P0C2Y1 421 aaPredicted RBP11.75□□□□□ -0.53
HIP1-207ENST00000616821 HDGFL1Q5TGJ6 251 aa11.75□□□□□ -0.53
HIP1-207ENST00000616821 BLOC1S2Q6QNY1 142 aa11.75□□□□□ -0.53
HIP1-207ENST00000616821 FILIP1Q7Z7B0 1213 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms