RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 IRAK4Q9NWZ3 460 aa18.18■□□□□ 0.5
NOP56-220ENST00000616692 DDIT3P35638 169 aa18.18■□□□□ 0.5
NOP56-220ENST00000616692 SF3A1Q15459 793 aaKnown RBP18.18■□□□□ 0.5
NOP56-220ENST00000616692 IRX1P78414 480 aaPredicted RBP18.17■□□□□ 0.5
NOP56-220ENST00000616692 TTC19Q6DKK2 380 aaPredicted RBP18.17■□□□□ 0.5
NOP56-220ENST00000616692 DDX46Q7L014 1031 aaKnown RBP18.17■□□□□ 0.5
NOP56-220ENST00000616692 MPRIPQ6WCQ1 1025 aa18.17■□□□□ 0.5
NOP56-220ENST00000616692 PIGBQ92521 554 aa18.17■□□□□ 0.5
NOP56-220ENST00000616692 ETAA1Q9NY74 926 aa18.17■□□□□ 0.5
NOP56-220ENST00000616692 KRBA2Q6ZNG9 492 aa18.16■□□□□ 0.5
NOP56-220ENST00000616692 IFNL2Q8IZJ0 200 aa18.16■□□□□ 0.5
NOP56-220ENST00000616692 KLHL23Q8NBE8 558 aa18.16■□□□□ 0.5
NOP56-220ENST00000616692 CIZ1Q9ULV3 898 aaPredicted RBP18.16■□□□□ 0.5
NOP56-220ENST00000616692 KIF13BQ9NQT8 1826 aa18.16■□□□□ 0.5
NOP56-220ENST00000616692 CCDC191Q8NCU4 936 aa18.16■□□□□ 0.5
NOP56-220ENST00000616692 CARD14Q9BXL6 1004 aa18.16■□□□□ 0.5
NOP56-220ENST00000616692 LOC102724428A0A0B4J2F2 783 aa18.15■□□□□ 0.5
NOP56-220ENST00000616692 ADRA2BP18089 450 aa18.15■□□□□ 0.5
NOP56-220ENST00000616692 SIK1P57059 783 aa18.15■□□□□ 0.5
NOP56-220ENST00000616692 RRP15Q9Y3B9 282 aaKnown RBP18.15■□□□□ 0.5
NOP56-220ENST00000616692 ANKRD18BA2A2Z9 1011 aa18.15■□□□□ 0.5
NOP56-220ENST00000616692 MYBPC2Q14324 1141 aa18.15■□□□□ 0.5
NOP56-220ENST00000616692 ZRSR2Q15696 482 aaKnown RBP18.15■□□□□ 0.5
NOP56-220ENST00000616692 RC3H1Q5TC82 1133 aaKnown RBP18.15■□□□□ 0.5
NOP56-220ENST00000616692 TEX13AQ9BXU3 409 aaPredicted RBP18.15■□□□□ 0.5
NOP56-220ENST00000616692 TMOD3Q9NYL9 352 aa18.15■□□□□ 0.5
NOP56-220ENST00000616692 GOLGA6CA6NDK9 693 aa18.14■□□□□ 0.49
NOP56-220ENST00000616692 GOLGA6BA6NDN3 693 aa18.14■□□□□ 0.49
NOP56-220ENST00000616692 PLIN1O60240 522 aa18.14■□□□□ 0.49
NOP56-220ENST00000616692 GOLGA6DP0CG33 693 aa18.14■□□□□ 0.49
NOP56-220ENST00000616692 MAGEA9P43362 315 aa18.14■□□□□ 0.49
NOP56-220ENST00000616692 BMS1Q14692 1282 aaKnown RBP18.14■□□□□ 0.49
NOP56-220ENST00000616692 MSL1Q68DK7 614 aa18.14■□□□□ 0.49
NOP56-220ENST00000616692 KIF1BPQ96EK5 621 aa18.14■□□□□ 0.49
NOP56-220ENST00000616692 GOLGA6AQ9NYA3 693 aa18.14■□□□□ 0.49
NOP56-220ENST00000616692 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.13■□□□□ 0.49
NOP56-220ENST00000616692 ERVV-2B6SEH9 535 aa18.13■□□□□ 0.49
NOP56-220ENST00000616692 RAB3GAP1Q15042 981 aa18.13■□□□□ 0.49
NOP56-220ENST00000616692 GPBP1L1Q9HC44 474 aaPredicted RBP18.13■□□□□ 0.49
NOP56-220ENST00000616692 ST7Q9NRC1 585 aa18.13■□□□□ 0.49
NOP56-220ENST00000616692 IGSF1Q8N6C5 1336 aa18.13■□□□□ 0.49
NOP56-220ENST00000616692 NEFHP12036 1026 aa18.13■□□□□ 0.49
NOP56-220ENST00000616692 TATDN2Q93075 761 aa18.13■□□□□ 0.49
NOP56-220ENST00000616692 KDRP35968 1356 aa18.13■□□□□ 0.49
NOP56-220ENST00000616692 PHKG2P15735 406 aa18.12■□□□□ 0.49
NOP56-220ENST00000616692 TGFB2P61812 414 aa18.12■□□□□ 0.49
NOP56-220ENST00000616692 PROCA1Q8NCQ7 364 aaPredicted RBP18.12■□□□□ 0.49
NOP56-220ENST00000616692 EMILIN1Q9Y6C2 1016 aa18.12■□□□□ 0.49
NOP56-220ENST00000616692 ABCD1P33897 745 aa18.12■□□□□ 0.49
NOP56-220ENST00000616692 RABEP1Q15276 862 aa18.12■□□□□ 0.49
NOP56-220ENST00000616692 ZSCAN23Q3MJ62 389 aa18.12■□□□□ 0.49
NOP56-220ENST00000616692 IFFO2Q5TF58 517 aa18.12■□□□□ 0.49
NOP56-220ENST00000616692 NEK11Q8NG66 645 aa18.12■□□□□ 0.49
NOP56-220ENST00000616692 ZNF428Q96B54 188 aa18.12■□□□□ 0.49
NOP56-220ENST00000616692 NAIF1Q69YI7 327 aaPredicted RBP18.11■□□□□ 0.49
NOP56-220ENST00000616692 LINC00116Q8NCU8 138 aa18.11■□□□□ 0.49
NOP56-220ENST00000616692 GPT2Q8TD30 523 aa18.11■□□□□ 0.49
NOP56-220ENST00000616692 EYA1Q99502 592 aa18.11■□□□□ 0.49
NOP56-220ENST00000616692 ZNF397Q8NF99 534 aaPredicted RBP18.11■□□□□ 0.49
NOP56-220ENST00000616692 NLGN1Q8N2Q7 840 aa18.1■□□□□ 0.49
NOP56-220ENST00000616692 FAXDC2Q96IV6 333 aa18.1■□□□□ 0.49
NOP56-220ENST00000616692 CNTNAP4Q9C0A0 1308 aa18.1■□□□□ 0.49
NOP56-220ENST00000616692 FAM163BP0C2L3 166 aa18.1■□□□□ 0.49
NOP56-220ENST00000616692 HSPA6P17066 643 aa18.1■□□□□ 0.49
NOP56-220ENST00000616692 NECTIN2Q92692 538 aa18.1■□□□□ 0.49
NOP56-220ENST00000616692 ADCY2Q08462 1091 aa18.09■□□□□ 0.49
NOP56-220ENST00000616692 MMS22LQ6ZRQ5 1243 aa18.09■□□□□ 0.49
NOP56-220ENST00000616692 C10orf71Q711Q0 1435 aa18.09■□□□□ 0.49
NOP56-220ENST00000616692 AP1ARQ63HQ0 302 aa18.08■□□□□ 0.49
NOP56-220ENST00000616692 KIAA1551Q9HCM1 1747 aa18.08■□□□□ 0.49
NOP56-220ENST00000616692 CD151P48509 253 aa18.08■□□□□ 0.48
NOP56-220ENST00000616692 TEX35Q5T0J7 233 aa18.08■□□□□ 0.48
NOP56-220ENST00000616692 AMOTQ4VCS5 1084 aa18.07■□□□□ 0.48
NOP56-220ENST00000616692 C17orf53Q8N3J3 647 aaPredicted RBP18.07■□□□□ 0.48
NOP56-220ENST00000616692 DCAF5Q96JK2 942 aa18.07■□□□□ 0.48
NOP56-220ENST00000616692 LRRFIP2Q9Y608 721 aaKnown RBP18.07■□□□□ 0.48
NOP56-220ENST00000616692 COL5A3P25940 1745 aaPredicted RBP18.07■□□□□ 0.48
NOP56-220ENST00000616692 KINO60870 393 aaKnown RBP18.07■□□□□ 0.48
NOP56-220ENST00000616692 SPTY2D1Q68D10 685 aaPredicted RBP18.07■□□□□ 0.48
NOP56-220ENST00000616692 HSCBQ8IWL3 235 aa18.07■□□□□ 0.48
NOP56-220ENST00000616692 SKILP12757 684 aa18.06■□□□□ 0.48
NOP56-220ENST00000616692 ITPK1Q13572 414 aa18.06■□□□□ 0.48
NOP56-220ENST00000616692 PXDNLA1KZ92 1463 aa18.06■□□□□ 0.48
NOP56-220ENST00000616692 MAPK8IP3Q9UPT6 1336 aa18.06■□□□□ 0.48
NOP56-220ENST00000616692 GNPATO15228 680 aa18.06■□□□□ 0.48
NOP56-220ENST00000616692 ERCC3P19447 782 aa18.06■□□□□ 0.48
NOP56-220ENST00000616692 TRIM74Q86UV6 250 aa18.06■□□□□ 0.48
NOP56-220ENST00000616692 TRIM73Q86UV7 250 aa18.06■□□□□ 0.48
NOP56-220ENST00000616692 SDR16C5Q8N3Y7 309 aa18.06■□□□□ 0.48
NOP56-220ENST00000616692 PRPF38AQ8NAV1 312 aaKnown RBP18.06■□□□□ 0.48
NOP56-220ENST00000616692 PLEKHO1Q53GL0 409 aaPredicted RBP18.06■□□□□ 0.48
NOP56-220ENST00000616692 TRAPPC3LQ5T215 181 aa18.06■□□□□ 0.48
NOP56-220ENST00000616692 ACRBPQ8NEB7 543 aa18.06■□□□□ 0.48
NOP56-220ENST00000616692 ATL2Q8NHH9 583 aa18.06■□□□□ 0.48
NOP56-220ENST00000616692 ZNF232Q9UNY5 417 aa18.06■□□□□ 0.48
NOP56-220ENST00000616692 RTCBQ9Y3I0 505 aaKnown RBP18.06■□□□□ 0.48
NOP56-220ENST00000616692 AMIGO3Q86WK7 504 aa18.05■□□□□ 0.48
NOP56-220ENST00000616692 PPM1EQ8WY54 764 aa18.05■□□□□ 0.48
NOP56-220ENST00000616692 C4AP0C0L4 1744 aa18.05■□□□□ 0.48
NOP56-220ENST00000616692 SMC2O95347 1197 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms