RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 CHD1LQ86WJ1 897 aa9.82□□□□□ -0.84
MALAT1-208ENST00000616527 SIRT2Q8IXJ6 389 aa9.82□□□□□ -0.84
MALAT1-208ENST00000616527 DDX17Q92841 729 aaKnown RBP9.82□□□□□ -0.84
MALAT1-208ENST00000616527 DCAF5Q96JK2 942 aa9.82□□□□□ -0.84
MALAT1-208ENST00000616527 NLRP2Q9NX02 1062 aa9.82□□□□□ -0.84
MALAT1-208ENST00000616527 ATP10DQ9P241 1426 aa9.82□□□□□ -0.84
MALAT1-208ENST00000616527 MRC1P22897 1456 aa9.81□□□□□ -0.84
MALAT1-208ENST00000616527 HMMRO75330 724 aa9.81□□□□□ -0.84
MALAT1-208ENST00000616527 GIGYF1O75420 1035 aaPredicted RBP9.81□□□□□ -0.84
MALAT1-208ENST00000616527 WNT7BP56706 349 aa9.81□□□□□ -0.84
MALAT1-208ENST00000616527 SH3D19Q5HYK7 790 aa9.81□□□□□ -0.84
MALAT1-208ENST00000616527 MPRIPQ6WCQ1 1025 aa9.81□□□□□ -0.84
MALAT1-208ENST00000616527 G2E3Q7L622 706 aa9.81□□□□□ -0.84
MALAT1-208ENST00000616527 SKAP1Q86WV1 359 aa9.81□□□□□ -0.84
MALAT1-208ENST00000616527 CARD10Q9BWT7 1032 aa9.81□□□□□ -0.84
MALAT1-208ENST00000616527 SLC52A2Q9HAB3 445 aa9.81□□□□□ -0.84
MALAT1-208ENST00000616527 EVA1BQ9NVM1 165 aa9.81□□□□□ -0.84
MALAT1-208ENST00000616527 KDM3BQ7LBC6 1761 aa9.8□□□□□ -0.84
MALAT1-208ENST00000616527 CEP85Q6P2H3 762 aa9.8□□□□□ -0.84
MALAT1-208ENST00000616527 PCMTD1Q96MG8 357 aaPredicted RBP9.8□□□□□ -0.84
MALAT1-208ENST00000616527 PRDM11Q9NQV5 511 aa9.8□□□□□ -0.84
MALAT1-208ENST00000616527 DBF4Q9UBU7 674 aaPredicted RBP9.8□□□□□ -0.84
MALAT1-208ENST00000616527 LIMD1Q9UGP4 676 aa9.8□□□□□ -0.84
MALAT1-208ENST00000616527 NHSL1Q5SYE7 1610 aa9.8□□□□□ -0.84
MALAT1-208ENST00000616527 MEGF6O75095 1541 aa9.79□□□□□ -0.84
MALAT1-208ENST00000616527 CFAP99D6REC4 459 aa9.79□□□□□ -0.84
MALAT1-208ENST00000616527 GNAI2P04899 355 aa9.79□□□□□ -0.84
MALAT1-208ENST00000616527 CSB-PGBD3P0DP91 1061 aa9.79□□□□□ -0.84
MALAT1-208ENST00000616527 SKOR1P84550 965 aa9.79□□□□□ -0.84
MALAT1-208ENST00000616527 FKBP5Q13451 457 aaPredicted RBP9.79□□□□□ -0.84
MALAT1-208ENST00000616527 BMP2KLQ5H9B9 411 aa9.79□□□□□ -0.84
MALAT1-208ENST00000616527 RC3H1Q5TC82 1133 aaKnown RBP9.79□□□□□ -0.84
MALAT1-208ENST00000616527 SNIP1Q8TAD8 396 aaKnown RBP9.79□□□□□ -0.84
MALAT1-208ENST00000616527 CABLES1Q8TDN4 633 aa9.79□□□□□ -0.84
MALAT1-208ENST00000616527 MRGPRX2Q96LB1 330 aa9.79□□□□□ -0.84
MALAT1-208ENST00000616527 HYPKQ9NX55 129 aa9.79□□□□□ -0.84
MALAT1-208ENST00000616527 HDAC5Q9UQL6 1122 aa9.79□□□□□ -0.84
MALAT1-208ENST00000616527 KDM6AO15550 1401 aaPredicted RBP9.79□□□□□ -0.84
MALAT1-208ENST00000616527 COL5A2P05997 1499 aaPredicted RBP9.79□□□□□ -0.84
MALAT1-208ENST00000616527 TTC24A2A3L6 582 aaPredicted RBP9.78□□□□□ -0.84
MALAT1-208ENST00000616527 ERVV-2B6SEH9 535 aa9.78□□□□□ -0.84
MALAT1-208ENST00000616527 KCNH2Q12809 1159 aa9.78□□□□□ -0.84
MALAT1-208ENST00000616527 CSPP1Q1MSJ5 1256 aa9.78□□□□□ -0.84
MALAT1-208ENST00000616527 ZNF790Q6PG37 636 aa9.78□□□□□ -0.84
MALAT1-208ENST00000616527 LYPD8Q6UX82 237 aa9.78□□□□□ -0.84
MALAT1-208ENST00000616527 MEIS3Q99687 375 aa9.78□□□□□ -0.84
MALAT1-208ENST00000616527 ZMYND15Q9H091 742 aa9.78□□□□□ -0.84
MALAT1-208ENST00000616527 PKD1L3Q7Z443 1732 aa9.78□□□□□ -0.84
MALAT1-208ENST00000616527 AHDC1Q5TGY3 1603 aaPredicted RBP9.78□□□□□ -0.84
MALAT1-208ENST00000616527 RGPD2P0DJD1 1756 aa9.78□□□□□ -0.84
MALAT1-208ENST00000616527 CYP27B1O15528 508 aa9.77□□□□□ -0.85
MALAT1-208ENST00000616527 LILRB3O75022 631 aa9.77□□□□□ -0.85
MALAT1-208ENST00000616527 ALDH1L1O75891 902 aa9.77□□□□□ -0.85
MALAT1-208ENST00000616527 ATP8B2P98198 1209 aa9.77□□□□□ -0.85
MALAT1-208ENST00000616527 SKIV2LQ15477 1246 aaKnown RBP9.77□□□□□ -0.85
MALAT1-208ENST00000616527 CHRNA2Q15822 529 aa9.77□□□□□ -0.85
MALAT1-208ENST00000616527 PROCA1Q8NCQ7 364 aaPredicted RBP9.77□□□□□ -0.85
MALAT1-208ENST00000616527 DDX21Q9NR30 783 aaKnown RBP eCLIP9.77□□□□□ -0.85
MALAT1-208ENST00000616527 NOP58Q9Y2X3 529 aaKnown RBP9.77□□□□□ -0.85
MALAT1-208ENST00000616527 ERBB4Q15303 1308 aa9.77□□□□□ -0.85
MALAT1-208ENST00000616527 PCDH11XQ9BZA7 1347 aa9.77□□□□□ -0.85
MALAT1-208ENST00000616527 PCDH11YQ9BZA8 1340 aa9.77□□□□□ -0.85
MALAT1-208ENST00000616527 SIPA1L3O60292 1781 aaPredicted RBP9.76□□□□□ -0.85
MALAT1-208ENST00000616527 F6X3S4 739 aa9.76□□□□□ -0.85
MALAT1-208ENST00000616527 KCNQ3O43525 872 aa9.76□□□□□ -0.85
MALAT1-208ENST00000616527 AVPP01185 164 aa9.76□□□□□ -0.85
MALAT1-208ENST00000616527 CLK2P49760 499 aaKnown RBP9.76□□□□□ -0.85
MALAT1-208ENST00000616527 BEND3Q5T5X7 828 aa9.76□□□□□ -0.85
MALAT1-208ENST00000616527 ANKRD45Q5TZF3 282 aa9.76□□□□□ -0.85
MALAT1-208ENST00000616527 ZCRB1Q8TBF4 217 aaKnown RBP9.76□□□□□ -0.85
MALAT1-208ENST00000616527 DNAAF4Q8WXU2 420 aa9.76□□□□□ -0.85
MALAT1-208ENST00000616527 SRCIN1Q9C0H9 1055 aa9.76□□□□□ -0.85
MALAT1-208ENST00000616527 USP44Q9H0E7 712 aa9.76□□□□□ -0.85
MALAT1-208ENST00000616527 UNC93B1Q9H1C4 597 aa9.76□□□□□ -0.85
MALAT1-208ENST00000616527 UPF2Q9HAU5 1272 aaKnown RBP9.76□□□□□ -0.85
MALAT1-208ENST00000616527 POLR3EQ9NVU0 708 aa9.76□□□□□ -0.85
MALAT1-208ENST00000616527 PARP4Q9UKK3 1724 aaKnown RBP9.76□□□□□ -0.85
MALAT1-208ENST00000616527 N4BP2Q86UW6 1770 aaPredicted RBP9.75□□□□□ -0.85
MALAT1-208ENST00000616527 LTBP4Q8N2S1 1624 aa9.75□□□□□ -0.85
MALAT1-208ENST00000616527 NUTM2BA6NNL0 878 aaPredicted RBP9.75□□□□□ -0.85
MALAT1-208ENST00000616527 NUTM2EB1AL46 878 aaPredicted RBP9.75□□□□□ -0.85
MALAT1-208ENST00000616527 DDX58O95786 925 aaKnown RBP9.75□□□□□ -0.85
MALAT1-208ENST00000616527 SNRPA1P09661 255 aaKnown RBP9.75□□□□□ -0.85
MALAT1-208ENST00000616527 IL2RBP14784 551 aa9.75□□□□□ -0.85
MALAT1-208ENST00000616527 MTX1Q13505 466 aa9.75□□□□□ -0.85
MALAT1-208ENST00000616527 QPCTQ16769 361 aa9.75□□□□□ -0.85
MALAT1-208ENST00000616527 KSR2Q6VAB6 950 aa9.75□□□□□ -0.85
MALAT1-208ENST00000616527 TOM1L2Q6ZVM7 507 aa9.75□□□□□ -0.85
MALAT1-208ENST00000616527 NUTM2AQ8IVF1 878 aaPredicted RBP9.75□□□□□ -0.85
MALAT1-208ENST00000616527 LNPKQ9C0E8 428 aa9.75□□□□□ -0.85
MALAT1-208ENST00000616527 OSBPL3Q9H4L5 887 aa9.75□□□□□ -0.85
MALAT1-208ENST00000616527 C1orf115Q9H7X2 142 aa9.75□□□□□ -0.85
MALAT1-208ENST00000616527 CHPF2Q9P2E5 772 aa9.75□□□□□ -0.85
MALAT1-208ENST00000616527 RGPD5Q99666 1765 aa9.74□□□□□ -0.85
MALAT1-208ENST00000616527 SCN11AQ9UI33 1791 aa9.74□□□□□ -0.85
MALAT1-208ENST00000616527 SLC4A10Q6U841 1118 aa9.74□□□□□ -0.85
MALAT1-208ENST00000616527 CRIPAKQ8N1N5 446 aa9.74□□□□□ -0.85
MALAT1-208ENST00000616527 SSH3Q8TE77 659 aa9.74□□□□□ -0.85
MALAT1-208ENST00000616527 TBC1D32Q96NH3 1257 aa9.74□□□□□ -0.85
MALAT1-208ENST00000616527 FMNL2Q96PY5 1086 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms